Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16g22r
(797 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 28 0.12
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 24 1.4
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 2.5
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 2.5
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 5.7
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 5.7
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 5.7
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 5.7
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 22 5.7
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 22 5.7
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 22 5.7
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 27.9 bits (59), Expect = 0.12
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +2
Query: 536 PTLGTPLTAVLYRPLARPRQST 601
P +GTP T ++Y+P P Q++
Sbjct: 847 PVIGTPSTGMMYKPFLIPEQTS 868
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 24.2 bits (50), Expect = 1.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 358 TTPPGPSRIQTGNPVGSATSLSSS 429
TTP PSR Q+ + SA ++S+S
Sbjct: 530 TTPVLPSRFQSHPSIDSANTISNS 553
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.4 bits (48), Expect = 2.5
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 586 TTPVHNNNVAVGDGQQGGAD 645
+ P +N + GDG++GGA+
Sbjct: 1052 SNPSYNFSSVSGDGEEGGAE 1071
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.4 bits (48), Expect = 2.5
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 586 TTPVHNNNVAVGDGQQGGAD 645
+ P +N + GDG++GGA+
Sbjct: 1048 SNPSYNFSSVSGDGEEGGAE 1067
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = -3
Query: 789 PDVTKTTIKLLQMGNVNSIRNSNYNGN 709
P + + + N N+ N+NYN N
Sbjct: 79 PKIISSLSNNYKYSNYNNYNNNNYNNN 105
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = -3
Query: 789 PDVTKTTIKLLQMGNVNSIRNSNYNGN 709
P + + + N N+ N+NYN N
Sbjct: 79 PKIISSLSNNYKYSNYNNYNNNNYNNN 105
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = -3
Query: 789 PDVTKTTIKLLQMGNVNSIRNSNYNGN 709
P + + + N N+ N+NYN N
Sbjct: 79 PKIISSLSNNYKYSNYNNYNNNNYNNN 105
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = -3
Query: 789 PDVTKTTIKLLQMGNVNSIRNSNYNGN 709
P + + + N N+ N+NYN N
Sbjct: 79 PKIISSLSNNYKYSNYNNYNNNNYNNN 105
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 22.2 bits (45), Expect = 5.7
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 194 RL*EQVLTLQPGWGFLPPLG*KSP 265
R+ + LQPG F PLG + P
Sbjct: 458 RMDRDAVYLQPGMSFGEPLGLRRP 481
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 22.2 bits (45), Expect = 5.7
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Frame = -3
Query: 711 NLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVP-SVG 535
+LP+ +HG S + + L SD + +++R G +T VP ++G
Sbjct: 121 SLPVIFWIHGGAFQFGSGIPMGAK--YLMDSDVIFVTINYRLGILGFLSTEDEVVPGNMG 178
Query: 534 -QFLGNFLVWLINN---GGGNWGRVHLIGFSLG 448
+ L W+ N GGN R+ LIG S G
Sbjct: 179 LKDQSMALRWVSENIEWFGGNPKRITLIGLSAG 211
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 22.2 bits (45), Expect = 5.7
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Frame = -3
Query: 711 NLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVP-SVG 535
+LP+ +HG S + + L SD + +++R G +T VP ++G
Sbjct: 121 SLPVIFWIHGGAFQFGSGIPMGAK--YLMDSDVIFVTINYRLGILGFLSTEDEVVPGNMG 178
Query: 534 -QFLGNFLVWLINN---GGGNWGRVHLIGFSLG 448
+ L W+ N GGN R+ LIG S G
Sbjct: 179 LKDQSMALRWVSENIEWFGGNPKRITLIGLSAG 211
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 259,491
Number of Sequences: 438
Number of extensions: 6724
Number of successful extensions: 27
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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