Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16g18f
(769 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0080 + 6598427-6598663,6599246-6599391,6599567-6599669,660... 108 4e-24
09_03_0039 + 11799277-11799486,11799565-11799710,11800758-118008... 94 1e-19
09_03_0038 + 11790075-11790302,11790397-11790542,11790915-117910... 94 1e-19
08_02_0585 + 19014674-19014871,19014987-19015132,19016742-190168... 86 3e-17
03_06_0470 + 34164873-34165856,34166335-34166568,34166680-341670... 35 0.062
06_03_0629 + 22920206-22920291,22920430-22920527,22920657-229207... 32 0.44
04_04_0308 + 24286923-24286927,24288430-24288907,24288980-242890... 30 2.3
01_06_1400 - 37036957-37037705,37037809-37037995,37038108-370382... 30 2.3
02_05_0549 + 29900714-29900953,29902224-29902323,29902578-299027... 29 3.1
03_02_0901 + 12267042-12267182,12267949-12268095,12268163-122682... 29 5.4
03_05_0370 + 23541188-23542537 28 7.1
02_05_0619 + 30409313-30409785,30411257-30411746 28 7.1
03_01_0372 + 2895807-2895883,2896557-2896647,2896741-2896839,289... 28 9.4
>02_02_0080 +
6598427-6598663,6599246-6599391,6599567-6599669,
6600407-6600593,6600699-6600792,6601290-6601443,
6601751-6601855,6601937-6602053,6602248-6602361,
6602891-6603073,6603207-6603486,6603565-6603686,
6603763-6603860,6603941-6604118,6604439-6604553,
6604656-6604723,6604825-6604902,6604986-6605060,
6605156-6605338
Length = 878
Score = 108 bits (260), Expect = 4e-24
Identities = 68/213 (31%), Positives = 108/213 (50%), Gaps = 1/213 (0%)
Frame = +2
Query: 134 PKAYTIIITPYFDTGDRNAFTFDGEVSITLTTTAVTKQIKLHSEDLNFVADNVTVSGASG 313
P+ Y + + P D + F G V +++ TA T+ + L++ +L V
Sbjct: 23 PRRYDLRLVP-----DLDGCAFTGSVDVSVDVTAPTRFLVLNAAELEVSPGGVQFKPHGA 77
Query: 314 DIALANTEPLIFDANYTFVYINLASELQVGVEYTLTISYRGPIREDLNGFYRNYYFENGV 493
+ L E + + I L VG E TL I+++G + + ++GFYR+ Y NG
Sbjct: 78 EQELHPAEVTNVPEDEILI-IRFNEVLPVG-EGTLVIAFKGTLNDKMHGFYRSVYELNGE 135
Query: 494 KKWLGATQMEPTHARKAFPCFDEPGLKATFTLIVDRPQNYKPSLANTKLQTTVTLSNGYV 673
KK + TQ EP AR+ FPC+DEP KA F + ++ P ++A + + NG +
Sbjct: 136 KKNMAVTQFEPADARRCFPCWDEPSFKAIFKITLEVPSE---TVALSNMPVVEEKVNGLI 192
Query: 674 REVFY-PTPIMPTYLVAFMVSQFDAALADSTNG 769
+ V++ TPIM TYLVA +V FD A +T+G
Sbjct: 193 KAVYFQETPIMSTYLVAVIVGMFDYVEAFTTDG 225
>09_03_0039 +
11799277-11799486,11799565-11799710,11800758-11800860,
11800996-11801182,11801299-11801392,11801530-11801683,
11801963-11802067,11802151-11802267,11802688-11802801,
11803171-11803260,11803875-11804057,11809196-11809550,
11809574-11809643,11809993-11810167,11810251-11810351,
11810390-11810516,11810639-11810716,11811926-11812270
Length = 917
Score = 93.9 bits (223), Expect = 1e-19
Identities = 67/211 (31%), Positives = 103/211 (48%), Gaps = 1/211 (0%)
Frame = +2
Query: 113 RLNTPIVPKAYTIIITPYFDTGDRNAFTFDGEVSITLTTTAVTKQIKLHSEDLNFVADNV 292
RL P+ Y + + P D A F GE S+ + +A T+ + L++ DL ++
Sbjct: 13 RLPRFAAPRRYELRLRP-----DLAACVFSGEASVAVDVSAPTRFLVLNAADLAVDRASI 67
Query: 293 TVSGASGDIALANTEPLIFDANYTFVYINLASELQVGVEYTLTISYRGPIREDLNGFYRN 472
G LA E +F+ + V + A EL +G E L + + G + + + GFYR+
Sbjct: 68 RFQG------LAPAEVSVFEEDEILV-LEFAGELPLG-EGVLAMRFNGTLNDQMRGFYRS 119
Query: 473 YYFENGVKKWLGATQMEPTHARKAFPCFDEPGLKATFTLIVDRPQNYKPSLANTKLQTTV 652
Y G K + TQ E AR+ FPC+DEP KA F L ++ P +L+N +
Sbjct: 120 KYEYKGETKNMAVTQFESVDARRCFPCWDEPSFKAKFKLTLEVPSEL-VALSNMPIVNEK 178
Query: 653 TLSNGYVREVFY-PTPIMPTYLVAFMVSQFD 742
G ++ V Y +P+M TYLVA +V FD
Sbjct: 179 IA--GPIKTVEYEESPVMSTYLVAIVVGLFD 207
>09_03_0038 +
11790075-11790302,11790397-11790542,11790915-11791017,
11791148-11791334,11791466-11791559,11791702-11791855,
11792189-11792305,11792695-11792808,11793629-11793811,
11794209-11794494,11794592-11794713,11794746-11794802,
11794803-11794900,11795036-11795213,11795355-11795455,
11795530-11795629,11795751-11795828,11796785-11796862,
11796956-11797138
Length = 868
Score = 93.9 bits (223), Expect = 1e-19
Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 1/211 (0%)
Frame = +2
Query: 113 RLNTPIVPKAYTIIITPYFDTGDRNAFTFDGEVSITLTTTAVTKQIKLHSEDLNFVADNV 292
RL P+ Y + + P D +A F G+ S+ + +A T+ + L++ DL ++
Sbjct: 19 RLPRFAAPRRYELRLRP-----DLDACVFTGDASVVVDVSAPTRFLVLNAADLAVDRASI 73
Query: 293 TVSGASGDIALANTEPLIFDANYTFVYINLASELQVGVEYTLTISYRGPIREDLNGFYRN 472
G LA TE +F+ + V + EL +G E L + + G + + + GFYR+
Sbjct: 74 RFQG------LAPTEVSLFEDDEILV-LEFDGELPLG-EGVLAMDFNGTLNDQMRGFYRS 125
Query: 473 YYFENGVKKWLGATQMEPTHARKAFPCFDEPGLKATFTLIVDRPQNYKPSLANTKLQTTV 652
Y G K + TQ E AR+ FPC+DEP KA F L ++ P +A + +
Sbjct: 126 KYEYKGETKNMAVTQFEAVDARRCFPCWDEPAFKAKFKLTLEVPSEL---VALSNMPVAC 182
Query: 653 TLSNGYVREVFY-PTPIMPTYLVAFMVSQFD 742
G ++ + Y +P+M TYLVA +V FD
Sbjct: 183 ETIAGPIKTIHYEESPLMSTYLVAIVVGLFD 213
>08_02_0585 +
19014674-19014871,19014987-19015132,19016742-19016844,
19017064-19017250,19017368-19017461,19017570-19017723,
19018076-19018192,19018276-19018296,19019096-19019209,
19019970-19020152,19021032-19021239,19021326-19021447,
19021559-19021656,19021875-19022052,19022130-19022244,
19022331-19022398,19022526-19022603,19023737-19023814,
19023897-19024082
Length = 815
Score = 85.8 bits (203), Expect = 3e-17
Identities = 57/189 (30%), Positives = 95/189 (50%), Gaps = 1/189 (0%)
Frame = +2
Query: 179 DRNAFTFDGEVSITLTTTAVTKQIKLHSEDLNFVADNVTVSGASGDIALANTEPLIFDAN 358
D A F G ++ + +A T+ + L++ +L V G+S L +E + F+ +
Sbjct: 30 DLAACAFSGSAAVAVAVSAPTRFLVLNAAEL-------AVDGSSD---LVPSEVVQFEED 79
Query: 359 YTFVYINLASELQVGVEYTLTISYRGPIREDLNGFYRNYYFENGVKKWLGATQMEPTHAR 538
V I +L +G E L + + G + + + GFYR+ Y G + + TQ E AR
Sbjct: 80 -EIVVIGFGQDLPIG-EGVLKMDFTGTLNDQMRGFYRSKYEYKGESRNMAVTQFEAADAR 137
Query: 539 KAFPCFDEPGLKATFTLIVDRPQNYKPSLANTKLQTTVTLSNGYVREVFY-PTPIMPTYL 715
+ FPC+DEP KA F L ++ P +A + + +G ++ V+Y +P+M TYL
Sbjct: 138 RCFPCWDEPAFKAKFKLTLEVPSEL---VALSNMPVIKETVHGPLKTVYYEESPLMSTYL 194
Query: 716 VAFMVSQFD 742
VA +V FD
Sbjct: 195 VAIVVGLFD 203
>03_06_0470 +
34164873-34165856,34166335-34166568,34166680-34167006,
34168426-34168716
Length = 611
Score = 35.1 bits (77), Expect = 0.062
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 512 TQMEPTHARKAFPCFDEPGLKATFTLIVDRP 604
+Q + HAR FPC D P + TF L+++ P
Sbjct: 128 SQCQSIHARSVFPCHDTPAARITFDLLLNVP 158
>06_03_0629 +
22920206-22920291,22920430-22920527,22920657-22920796,
22921596-22921626,22922025-22922128,22922439-22922560,
22922651-22923050,22923245-22923268
Length = 334
Score = 32.3 bits (70), Expect = 0.44
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Frame = -2
Query: 255 SLICFVTAVVVSVMLTSPSNVKALRSPVSKY-GVMIIVYAFGTIGVFSL*FVSVP-DVLA 82
+++CFV + ++ + +S + A R+P+ KY GV I +G+ +L F+S P VLA
Sbjct: 52 NVVCFVWSFIMIKLWSSGGSSSAGRAPLRKYWGVSITNTVGPAMGIEALKFISYPAQVLA 111
Query: 81 R 79
+
Sbjct: 112 K 112
>04_04_0308 +
24286923-24286927,24288430-24288907,24288980-24289099,
24289182-24289235,24289467-24289579,24289799-24290011,
24290123-24290201,24290323-24290376,24290448-24290522,
24291029-24291193,24291843-24291941,24292186-24292241,
24292331-24292433,24293289-24293417,24293657-24293835,
24293953-24293977,24294060-24294175,24294252-24294342
Length = 717
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/94 (26%), Positives = 37/94 (39%)
Frame = +2
Query: 14 HLESPSSYTDMQRIFVIAIACLLARTSGTDTNYRLNTPIVPKAYTIIITPYFDTGDRNAF 193
H SP D I I +L R+ D +Y + P + I + FD +
Sbjct: 484 HKTSPQLLADKD----ILIRSVLNRSEMKDGHYVFDIPRIANDLKITMNEVFD--HLHKL 537
Query: 194 TFDGEVSITLTTTAVTKQIKLHSEDLNFVADNVT 295
F GE+S L A I +D N ++ N+T
Sbjct: 538 KFSGEISFELKDPAYCYVILWRPDDFNALSANLT 571
>01_06_1400 -
37036957-37037705,37037809-37037995,37038108-37038205,
37039562-37039655
Length = 375
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = -2
Query: 252 LICFVTAVVVSVMLTSPSNVKALRSPVSKYGVMIIVYAFGTI-GVFSL*FVSVPDVLARR 76
L+CF VV+ L + ++KA+ ++ G I +Y F I GVF + +P + R
Sbjct: 46 LVCF--GAVVACTLLAGQSMKAIYL-IANPGGTIKLYVFVAIFGVFMMILAQMPSFHSLR 102
Query: 75 HAIAITNIRCIS 40
H I+ + C++
Sbjct: 103 HVNLISLVLCLA 114
>02_05_0549 +
29900714-29900953,29902224-29902323,29902578-29902719,
29902720-29902826,29903179-29903480
Length = 296
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = -1
Query: 247 LLCHCCRGERDADFSIKRKGIAVTGVKVWCNDNCIRFWYYWSVQSVICVG 98
+L HC G+ D S+ +++ V + ND I WY S + I +G
Sbjct: 123 VLVHCMSGKNRCDSSV----VSIHVVSIVVNDRLILLWYKISRSAAIVIG 168
>03_02_0901 +
12267042-12267182,12267949-12268095,12268163-12268253,
12268367-12268485,12268779-12268969,12269440-12269650,
12270072-12270309,12270944-12271329,12271933-12271956,
12271984-12272077,12272341-12272525,12273025-12273255,
12273665-12273730,12273816-12274034,12274764-12275003,
12275244-12275423,12276269-12276535,12276612-12276815,
12276896-12277048
Length = 1128
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +1
Query: 52 NICNSNSMSSSEDVWYRHKLQTEHSNSTKSVYNYH 156
NICN+N++ S++ + +EH N + N H
Sbjct: 443 NICNANTLESNDHSYSECSSDSEHDNDEATQQNDH 477
>03_05_0370 + 23541188-23542537
Length = 449
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 576 ALRPGSSKHGNAFLACVGSICVA 508
ALRPG H + LAC G + +A
Sbjct: 116 ALRPGRQVHARSILACQGDVIMA 138
>02_05_0619 + 30409313-30409785,30411257-30411746
Length = 320
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = -1
Query: 655 GHCSLQLSVSQGGFVVLRSVNNQGESGFKTRLIKTWERLPRVCRLHLCRAQ 503
G C++ L Q G V + E GF R + +W R RVC +CRA+
Sbjct: 77 GECAVCLEAFQAGDRC--RVLPRCEHGFHARCVDSWLRQSRVC--PICRAE 123
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = -1
Query: 655 GHCSLQLSVSQGGFVVLRSVNNQGESGFKTRLIKTWERLPRVCRLHLCRAQ 503
G C++ L + G R V + E GF + + +W R+ R+C +CRA+
Sbjct: 249 GECAVCLEAFRAGD--RRRVLPRCEHGFHAQCVDSWLRVSRLC--PICRAE 295
>03_01_0372 +
2895807-2895883,2896557-2896647,2896741-2896839,
2897220-2897268,2897269-2897405,2898027-2898248,
2898335-2898488,2898574-2898723,2898890-2898978,
2899632-2899844,2900180-2900314,2900461-2900640,
2901004-2901111,2901215-2901340,2901421-2901550,
2901637-2901729,2902067-2902192,2902294-2902304
Length = 729
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 3/29 (10%)
Frame = -2
Query: 603 GRSTIRVKVALRPGSSK---HGNAFLACV 526
GRS +RV V LRP +S+ HG F +CV
Sbjct: 23 GRSRVRVAVRLRPKNSEDLAHGADFDSCV 51
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,579,752
Number of Sequences: 37544
Number of extensions: 399349
Number of successful extensions: 897
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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