Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16g09f
         (744 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   3.0  
DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    22   5.3  
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    22   5.3  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   7.0  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              21   9.2  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              21   9.2  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   9.2  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     21   9.2  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   9.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   9.2  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 474 YGRLCEWKSGCVVLKVKICSPRW 542
           +G + E K+G V+L    CS +W
Sbjct: 193 FGVVYENKNGSVILDTARCSMKW 215


>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 486 CEWKSGCVVLKVKICSPRWKC 548
           C  + G +  K K+C PR KC
Sbjct: 71  CVCRLGYLRNKKKVCVPRSKC 91


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 486 CEWKSGCVVLKVKICSPRWKC 548
           C  + G +  K K+C PR KC
Sbjct: 71  CVCRLGYLRNKKKVCVPRSKC 91


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -1

Query: 120 PRACRPRH 97
           P ACRPRH
Sbjct: 519 PSACRPRH 526


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 75  AQCSVLLSAEVYMR 116
           A+CSV+  A +Y+R
Sbjct: 102 AECSVISDANIYIR 115


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 75  AQCSVLLSAEVYMR 116
           A+CSV+  A +Y+R
Sbjct: 102 AECSVISDANIYIR 115


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 160 LLPASCLRASLPHQPHARPVRGRGA 234
           L+  SC+    P++PH   + G+ A
Sbjct: 97  LVVVSCVTKDQPYRPHPHNLVGKEA 121


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 160 LLPASCLRASLPHQPHARPVRGRGA 234
           L+  SC+    P++PH   + G+ A
Sbjct: 97  LVVVSCVTKDQPYRPHPHNLVGKEA 121


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 256  LESRRHHQRRARVQGEHEVDVGE 188
            + SRR  QR+ +  G+ E D  E
Sbjct: 1764 VSSRRRQQRKQQTPGDVESDESE 1786


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 256  LESRRHHQRRARVQGEHEVDVGE 188
            + SRR  QR+ +  G+ E D  E
Sbjct: 1760 VSSRRRQQRKQQTPGDVESDESE 1782


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,198
Number of Sequences: 438
Number of extensions: 2746
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)