Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16f22f
(704 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0215 - 1714224-1714364,1714795-1715187,1715279-1715377,171... 221 6e-58
12_01_0211 - 1601129-1601272,1601670-1602062,1602142-1602240,160... 220 8e-58
11_01_0210 - 1647922-1648065,1648459-1648851,1648930-1649028,164... 220 8e-58
11_01_0033 - 251730-251855,252068-252144,252228-252318,252644-25... 59 3e-09
12_01_0032 - 266954-267079,267204-267245,267290-267366,267450-26... 56 4e-08
11_01_0676 - 5511755-5511831,5512857-5513052,5513462-5513577,551... 35 0.072
06_01_0080 + 644021-645463 33 0.29
01_06_0640 + 30779457-30779623,30779707-30779828,30779959-307800... 32 0.51
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412... 31 0.67
03_05_1091 + 30322035-30322739,30322861-30324043,30324114-303251... 29 2.7
10_01_0266 + 2816391-2818898,2818934-2819162,2819369-2819444,281... 29 4.8
03_05_0968 + 29277122-29277445,29278389-29278505,29278957-292791... 29 4.8
03_04_0243 + 19298293-19299117 28 6.3
11_01_0355 + 2679561-2680985,2681183-2682295 28 8.3
10_08_0406 - 17688069-17690643,17691065-17691132 28 8.3
07_03_0196 + 14995224-14995489,14995859-14995877,14996703-149968... 28 8.3
03_05_0804 + 27835508-27835805,27836372-27836421,27837306-278379... 28 8.3
02_03_0134 - 15596379-15597689 28 8.3
>08_01_0215 -
1714224-1714364,1714795-1715187,1715279-1715377,
1716248-1716316,1716408-1716665
Length = 319
Score = 221 bits (539), Expect = 6e-58
Identities = 110/189 (58%), Positives = 138/189 (73%), Gaps = 2/189 (1%)
Frame = +1
Query: 94 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMR 273
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 274 KAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 447
+ IK H DN N +L+P + GNVG +FT+GDL EVR+++ + KV APAR G +AP+
Sbjct: 64 RCIKVHADNTGNKEFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVD 123
Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 627
VV+P NTGL P +TSFFQ L+IPTKI+KGT+EII V ++K GDKVG+SE+ LL L I
Sbjct: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKLGI 183
Query: 628 SPFSYGLVV 654
PFSYGLV+
Sbjct: 184 RPFSYGLVI 192
>12_01_0211 -
1601129-1601272,1601670-1602062,1602142-1602240,
1602920-1602988,1603071-1603328
Length = 320
Score = 220 bits (538), Expect = 8e-58
Identities = 110/189 (58%), Positives = 138/189 (73%), Gaps = 2/189 (1%)
Frame = +1
Query: 94 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMR 273
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 274 KAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 447
+ IK H DN N +L+P + GNVG +FT+GDL EVR+++ + KV APAR G +AP+
Sbjct: 64 RCIKVHADNTGNKDFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVD 123
Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 627
VV+P NTGL P +TSFFQ L+IPTKI+KGT+EII V ++K GDKVG+SE+ LL L I
Sbjct: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKLGI 183
Query: 628 SPFSYGLVV 654
PFSYGLV+
Sbjct: 184 RPFSYGLVI 192
>11_01_0210 -
1647922-1648065,1648459-1648851,1648930-1649028,
1649706-1649774,1649877-1650134
Length = 320
Score = 220 bits (538), Expect = 8e-58
Identities = 110/189 (58%), Positives = 138/189 (73%), Gaps = 2/189 (1%)
Frame = +1
Query: 94 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMR 273
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 274 KAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 447
+ IK H DN N +L+P + GNVG +FT+GDL EVR+++ + KV APAR G +AP+
Sbjct: 64 RCIKVHADNTGNKDFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVD 123
Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 627
VV+P NTGL P +TSFFQ L+IPTKI+KGT+EII V ++K GDKVG+SE+ LL L I
Sbjct: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKLGI 183
Query: 628 SPFSYGLVV 654
PFSYGLV+
Sbjct: 184 RPFSYGLVI 192
>11_01_0033 -
251730-251855,252068-252144,252228-252318,252644-252704,
252800-252858,252955-253045,253238-253406,253760-253787
Length = 233
Score = 59.3 bits (137), Expect = 3e-09
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 3/202 (1%)
Frame = +1
Query: 52 KFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR 231
K R+ TLS+ ++ K I ++ Y ++ DN+ +Q+++ +R L+
Sbjct: 3 KSKRNRPVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLK 62
Query: 232 GSS-IVLMGKNTMMRKAIKDHLDN-NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENK 405
SS I L GK M + D L KL ++G+ G FT +V E +
Sbjct: 63 SSSRIFLAGKKVMQIALGRSSADEAKTGLHKLSKFLQGDTGLFFTNLPRDDVERLFREFE 122
Query: 406 VQAPARPGAIAPLSVVI-PAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGD 582
AR G+I +V + E F + +P +++KG +E++ D + + G
Sbjct: 123 EHDFARTGSIVTETVELKEGPLEQFTHEMEPFLRKQGLPVRLNKGAVELVADHIVCEEGK 182
Query: 583 KVGASEATLLNMLNISPFSYGL 648
+ A L +L + ++ L
Sbjct: 183 PISPEAAQTLRLLGMQMATFRL 204
>12_01_0032 -
266954-267079,267204-267245,267290-267366,267450-267540,
267864-267924,268021-268079,268176-268266,268481-268698,
268818-268824,269013-269148,270064-270307
Length = 383
Score = 55.6 bits (128), Expect = 4e-08
Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 3/186 (1%)
Frame = +1
Query: 64 SPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS- 240
S TLS+ ++ K I ++ Y ++ DN+ +Q+++ +R L+ SS
Sbjct: 143 SSAVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLKSSSR 202
Query: 241 IVLMGKNTMMRKAIKDHLDN-NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAP 417
I L GK M + D L KL ++G+ G FT +V E +
Sbjct: 203 IFLAGKKVMQIALGRSPADEAKTGLHKLSKFLQGDTGLFFTNLPRDDVERLFREFEEHDF 262
Query: 418 ARPGAIAPLSVVI-PAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGA 594
AR G+IA +V + E F + +P +++KG +E++ D + + G +
Sbjct: 263 ARTGSIATETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGAVELVADHIVCEEGKPISP 322
Query: 595 SEATLL 612
A L
Sbjct: 323 EAAQTL 328
>11_01_0676 -
5511755-5511831,5512857-5513052,5513462-5513577,
5513752-5514597,5515515-5515766,5522344-5525206
Length = 1449
Score = 34.7 bits (76), Expect = 0.072
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 9/108 (8%)
Frame = +1
Query: 220 ISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKL-LPH--IKGNVGFVFTRGDLVEVRDK 390
I L + L+ + ++ L N AL+KL LPH ++GN+GF+ + + ++ D
Sbjct: 372 IGLLQKLVYLLLSANQLSGSVPRTLGNIAALQKLVLPHNNLEGNMGFLSSLSECRQLEDL 431
Query: 391 LLENKVQAPARPGAIAPLSV----VIPAHN--TGLGPEKTSFFQALSI 516
+L++ A P + LS I HN G PEK S +L +
Sbjct: 432 ILDHNSFVGALPDHLGNLSARLISFIADHNKLAGSLPEKMSNLSSLEL 479
>06_01_0080 + 644021-645463
Length = 480
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -3
Query: 558 IVDDFNSTL*NLGRDRKSLEERGLLWTEAGVVGGND 451
I+D N N R K++EERGLL+ GV GG +
Sbjct: 100 IIDGGNEWYENTERREKAMEERGLLYLGMGVSGGEE 135
>01_06_0640 +
30779457-30779623,30779707-30779828,30779959-30780014,
30780147-30780254
Length = 150
Score = 31.9 bits (69), Expect = 0.51
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +1
Query: 457 PAHNTGLGPEKTSFFQALSIPTK--ISKGTIEIINDVHILKPGDKVGASEATLLNMLNIS 630
PA PE +F S + IS+ +E + H L P AS A L +ML +
Sbjct: 29 PAAAAARSPELAAFSLPRSTRRRPAISRVPVEALGGAHGLMPLHSATAS-ALLTSMLGLK 87
Query: 631 PFSYGLVVKAGI*FWNYFLHLK 696
P S+G + + G F HLK
Sbjct: 88 PGSWGWLSEVGFDFGAPIHHLK 109
>02_01_0561 +
4120268-4120339,4121462-4121588,4121715-4121770,
4121841-4121912,4122017-4122128,4122247-4122284,
4122412-4122513,4122619-4122675,4122755-4122826,
4122992-4123093,4123210-4123405,4123988-4124094,
4124497-4124691,4124771-4124857,4124905-4124913,
4125599-4125703,4126067-4126164,4126250-4126328,
4126912-4127000,4127086-4127200
Length = 629
Score = 31.5 bits (68), Expect = 0.67
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Frame = +1
Query: 304 PALEK-LLPHIKGN---VGFVFTRGDLVEV--RDKLLENKVQAPARPGAIAPLSVVIPA 462
PAL+K L H K VG + T GDL + + L+++KV P PGA+ +S + PA
Sbjct: 131 PALDKDALWHFKPEKLGVGDIITGGDLYAIVNENTLMQHKVALP--PGAMGKISYIAPA 187
>03_05_1091 +
30322035-30322739,30322861-30324043,30324114-30325105,
30326409-30326798,30326896-30330060
Length = 2144
Score = 29.5 bits (63), Expect = 2.7
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -1
Query: 668 HIPALTTRPYENGE 627
H+PAL +PYENGE
Sbjct: 476 HVPALKAKPYENGE 489
>10_01_0266 +
2816391-2818898,2818934-2819162,2819369-2819444,
2819776-2819830,2822042-2822110,2823077-2823321,
2824029-2824065
Length = 1072
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 19 PHGSRAF---CLVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPK 165
PH S A CL L+F T R R K T K + II++L+ YP+
Sbjct: 802 PHASSADIDKCLFLEFLMLMTCTTIRNSRSFKFTHKKFGYWMIIEMLNSYPR 853
>03_05_0968 +
29277122-29277445,29278389-29278505,29278957-29279114,
29279678-29279727,29279968-29280161,29280867-29281049,
29281152-29281270,29281383-29281522,29281857-29281937,
29282286-29282389
Length = 489
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 360 GEHEANVALDVWQQFLEGWIVVQVVFDGFAHH 265
G HEA+ L W+ + GW + F GFA H
Sbjct: 189 GNHEASNYL--WELYYGGWAAPNIYFLGFAGH 218
>03_04_0243 + 19298293-19299117
Length = 274
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -1
Query: 455 MTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPTLPLMCGNSFS 312
+ TD+ + APG A A + S SRTS +P ++ PT P +S +
Sbjct: 172 VVTDSLSRAPGAAWAAAMAPTSWSRTS--APPASSSPTSPRRARSSLT 217
>11_01_0355 + 2679561-2680985,2681183-2682295
Length = 845
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +2
Query: 293 WTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRTKSKL 415
W ++ HTS TL+ SP+ +S+ T+C+ + +
Sbjct: 480 WNPMRNGSAPHHTSELTLSFSSPSPSSISGYTSCYNNNNMM 520
>10_08_0406 - 17688069-17690643,17691065-17691132
Length = 880
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 135 DHPTLGRVPKMFHRGCR*RGLATDAA-DPYLATWLQYRAHGKKHNDAQSHQR 287
D P R ++FHR R RG A D A D W+ + ND Q H +
Sbjct: 789 DDPAARRGARLFHR-LRRRGPAFDKAWDELARFWVHLVVYLAPSNDVQGHAK 839
>07_03_0196 +
14995224-14995489,14995859-14995877,14996703-14996839,
14998365-14998457,15001597-15001932,15003035-15003503
Length = 439
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = -3
Query: 432 GTRTSWSLDFVLQQFVTDLNEVSAGEHEANVALDVWQQFLEGW 304
G +WS F +LN +S H+ V L+ W + W
Sbjct: 197 GNAENWSSQGDKDDFYNELNTISEARHKNLVKLEGWCCHINAW 239
>03_05_0804 +
27835508-27835805,27836372-27836421,27837306-27837998,
27838077-27838388,27838528-27838698
Length = 507
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -1
Query: 566 MCTSLMISIVPFEILVGIERAWKKEVFSGPRPVLWAGMTTD 444
+CT L I+ L+G+ +A+ V SGP P G T D
Sbjct: 330 ICTGLGIAPRSIGDLIGVVKAYTTRVGSGPFPTELLGKTGD 370
>02_03_0134 - 15596379-15597689
Length = 436
Score = 27.9 bits (59), Expect = 8.3
Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 1/102 (0%)
Frame = +2
Query: 170 SSWVPITWARNRCSRSVSRYVAPVSCSWEKTQ*CAKPSKTTWTTIQPSRNCCHTSRATLA 349
S W P ARNR S+ ++R A S + +K+ ++P + T +AT
Sbjct: 114 SVWPPALTARNRSSKDMNR-TAKSSSAMQKSNLSSRPGVDKMAASSAKQ---RTQKATPG 169
Query: 350 SCSPAET-SLRSVTNCWRTKSKLQLVLVPLPHCQSSFPPTTP 472
+ + +T ++ SV T K V +P Q + P+ P
Sbjct: 170 ALAGGKTQAVPSVRAPGTTTKKTMGVANSVPSIQRTSIPSRP 211
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,772,442
Number of Sequences: 37544
Number of extensions: 494749
Number of successful extensions: 1350
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1347
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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