Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16f18r
         (911 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL589790-1|CAI17845.1|  692|Homo sapiens proprotein convertase s...    31   5.8  
AB040888-1|BAA95979.2| 2450|Homo sapiens KIAA1455 protein protein.     31   5.8  
BC074943-1|AAH74943.1|  332|Homo sapiens opticin protein.              31   7.7  
BC074942-1|AAH74942.1|  332|Homo sapiens opticin protein.              31   7.7  
AY829011-1|AAV67948.1|  693|Homo sapiens proprotein convertase s...    31   7.7  
AY077681-1|AAL78286.1|  332|Homo sapiens opticin protein.              31   7.7  
AL391817-3|CAI17035.1|  332|Homo sapiens opticin protein.              31   7.7  
AJ133790-1|CAB53459.1|  332|Homo sapiens opticin protein.              31   7.7  
AF161702-1|AAD45900.1|  332|Homo sapiens oculoglycan protein.          31   7.7  

>AL589790-1|CAI17845.1|  692|Homo sapiens proprotein convertase
           subtilisin/kexin type 9 protein.
          Length = 692

 Score = 31.1 bits (67), Expect = 5.8
 Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 6/69 (8%)
 Frame = -1

Query: 830 QQWINGQCRDVWRNAATPSNMITVPPN---CLPGQVYINGQ---CRDVWRNEASPSNMIT 669
           Q+ I+   +DV   A  P +   + PN    LP   +  G    CR VW   + P+ M T
Sbjct: 413 QRLIHFSAKDVINEAWFPEDQRVLTPNLVAALPPSTHGAGWQLFCRTVWSAHSGPTRMAT 472

Query: 668 VPPNCPPGQ 642
               C P +
Sbjct: 473 AVARCAPDE 481


>AB040888-1|BAA95979.2| 2450|Homo sapiens KIAA1455 protein protein.
          Length = 2450

 Score = 31.1 bits (67), Expect = 5.8
 Identities = 26/115 (22%), Positives = 40/115 (34%), Gaps = 5/115 (4%)
 Frame = -1

Query: 857 QCPPNCPGGQQWINGQCRDVWRNAATPSNMITVPPNCLPGQVYINGQCR--DVWR-NEAS 687
           +CP NC G  + ++G C           +    P  C     Y  G+C     W+  E  
Sbjct: 268 ECPRNCHGNGECVSGTCHCFPGFLGPDCSRAACPVLCSGNGQYSKGRCLCFSGWKGTECD 327

Query: 686 PSNMITVPPNCPPGQVYINGQ--WRDVWRNEASPSNMITVPPNCPPGQVYINGQC 528
                 + P C    + I G       ++ E S      + P C    V I+G+C
Sbjct: 328 VPTTQCIDPQCGGRGICIMGSCACNSGYKGE-SCEEADCIDPGCSNHGVCIHGEC 381


>BC074943-1|AAH74943.1|  332|Homo sapiens opticin protein.
          Length = 332

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +1

Query: 160 LLLNSAPNYGVPDCDICEMLRRSI 231
           LLL+S PN+G+P C +C  L  S+
Sbjct: 115 LLLSSQPNHGLPTCLVCVCLGSSV 138


>BC074942-1|AAH74942.1|  332|Homo sapiens opticin protein.
          Length = 332

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +1

Query: 160 LLLNSAPNYGVPDCDICEMLRRSI 231
           LLL+S PN+G+P C +C  L  S+
Sbjct: 115 LLLSSQPNHGLPTCLVCVCLGSSV 138


>AY829011-1|AAV67948.1|  693|Homo sapiens proprotein convertase
           subtilisin/kexin type 9 protein.
          Length = 693

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 6/69 (8%)
 Frame = -1

Query: 830 QQWINGQCRDVWRNAATPSNMITVPPN---CLPGQVYINGQ---CRDVWRNEASPSNMIT 669
           Q+ I+   +DV   A  P +   + PN    LP   +  G    CR VW   + P+ M T
Sbjct: 414 QRLIHFSAKDVINEAWFPEDQRVLTPNLVAALPPSTHGAGWQLFCRTVWSAHSGPTRMAT 473

Query: 668 VPPNCPPGQ 642
               C P +
Sbjct: 474 AIARCAPDE 482


>AY077681-1|AAL78286.1|  332|Homo sapiens opticin protein.
          Length = 332

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +1

Query: 160 LLLNSAPNYGVPDCDICEMLRRSI 231
           LLL+S PN+G+P C +C  L  S+
Sbjct: 115 LLLSSQPNHGLPTCLVCVCLGSSV 138


>AL391817-3|CAI17035.1|  332|Homo sapiens opticin protein.
          Length = 332

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +1

Query: 160 LLLNSAPNYGVPDCDICEMLRRSI 231
           LLL+S PN+G+P C +C  L  S+
Sbjct: 115 LLLSSQPNHGLPTCLVCVCLGSSV 138


>AJ133790-1|CAB53459.1|  332|Homo sapiens opticin protein.
          Length = 332

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +1

Query: 160 LLLNSAPNYGVPDCDICEMLRRSI 231
           LLL+S PN+G+P C +C  L  S+
Sbjct: 115 LLLSSQPNHGLPTCLVCVCLGSSV 138


>AF161702-1|AAD45900.1|  332|Homo sapiens oculoglycan protein.
          Length = 332

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +1

Query: 160 LLLNSAPNYGVPDCDICEMLRRSI 231
           LLL+S PN+G+P C +C  L  S+
Sbjct: 115 LLLSSQPNHGLPTCLVCVCLGSSV 138


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,802,932
Number of Sequences: 237096
Number of extensions: 3140345
Number of successful extensions: 10141
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10130
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11825849886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)