Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16f18f
         (793 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL589790-1|CAI17845.1|  692|Homo sapiens proprotein convertase s...    31   4.8  
AY829011-1|AAV67948.1|  693|Homo sapiens proprotein convertase s...    31   6.3  
Z69744-1|CAA93625.1| 4005|Homo sapiens ALL-1 protein protein.          30   8.3  
L04284-1|AAA58669.1| 3969|Homo sapiens HRX protein.                    30   8.3  
AY373585-1|AAQ63624.1| 3969|Homo sapiens myeloid/lymphoid or mix...    30   8.3  
AB209508-1|BAD92745.1| 2880|Homo sapiens myeloid/lymphoid or mix...    30   8.3  

>AL589790-1|CAI17845.1|  692|Homo sapiens proprotein convertase
           subtilisin/kexin type 9 protein.
          Length = 692

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 6/69 (8%)
 Frame = +2

Query: 179 QQWINGQCRDVWRNAATPSNMITVPPN---CLPGQVYINGQ---CRDVWRNEASPSNMIT 340
           Q+ I+   +DV   A  P +   + PN    LP   +  G    CR VW   + P+ M T
Sbjct: 413 QRLIHFSAKDVINEAWFPEDQRVLTPNLVAALPPSTHGAGWQLFCRTVWSAHSGPTRMAT 472

Query: 341 VPPNCPPGQ 367
               C P +
Sbjct: 473 AVARCAPDE 481


>AY829011-1|AAV67948.1|  693|Homo sapiens proprotein convertase
           subtilisin/kexin type 9 protein.
          Length = 693

 Score = 30.7 bits (66), Expect = 6.3
 Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 6/69 (8%)
 Frame = +2

Query: 179 QQWINGQCRDVWRNAATPSNMITVPPN---CLPGQVYINGQ---CRDVWRNEASPSNMIT 340
           Q+ I+   +DV   A  P +   + PN    LP   +  G    CR VW   + P+ M T
Sbjct: 414 QRLIHFSAKDVINEAWFPEDQRVLTPNLVAALPPSTHGAGWQLFCRTVWSAHSGPTRMAT 473

Query: 341 VPPNCPPGQ 367
               C P +
Sbjct: 474 AIARCAPDE 482


>Z69744-1|CAA93625.1| 4005|Homo sapiens ALL-1 protein protein.
          Length = 4005

 Score = 30.3 bits (65), Expect = 8.3
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
 Frame = +2

Query: 149  ITVPPNCPGGQQWINGQCRDVWRNAATPSNMITVPPNC-LPGQVYINGQCRDVWRNEASP 325
            I+ PP C   +Q  +G  +D+ RN++TP   + V P   +  Q Y+         ++ S 
Sbjct: 3040 ISSPP-CGSVEQG-HGNNQDLTRNSSTPGLQVPVSPTVPIQNQKYVPNSTDSPGPSQISN 3097

Query: 326  SNMITVPPNCPP 361
            + + T PP+  P
Sbjct: 3098 AAVQTTPPHLKP 3109


>L04284-1|AAA58669.1| 3969|Homo sapiens HRX protein.
          Length = 3969

 Score = 30.3 bits (65), Expect = 8.3
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
 Frame = +2

Query: 149  ITVPPNCPGGQQWINGQCRDVWRNAATPSNMITVPPNC-LPGQVYINGQCRDVWRNEASP 325
            I+ PP C   +Q  +G  +D+ RN++TP   + V P   +  Q Y+         ++ S 
Sbjct: 3004 ISSPP-CGSVEQG-HGNNQDLTRNSSTPGLQVPVSPTVPIQNQKYVPNSTDSPGPSQISN 3061

Query: 326  SNMITVPPNCPP 361
            + + T PP+  P
Sbjct: 3062 AAVQTTPPHLKP 3073


>AY373585-1|AAQ63624.1| 3969|Homo sapiens myeloid/lymphoid or
            mixed-lineage leukemia (trithorax homolog, Drosophila)
            protein.
          Length = 3969

 Score = 30.3 bits (65), Expect = 8.3
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
 Frame = +2

Query: 149  ITVPPNCPGGQQWINGQCRDVWRNAATPSNMITVPPNC-LPGQVYINGQCRDVWRNEASP 325
            I+ PP C   +Q  +G  +D+ RN++TP   + V P   +  Q Y+         ++ S 
Sbjct: 3004 ISSPP-CGSVEQG-HGNNQDLTRNSSTPGLQVPVSPTVPIQNQKYVPNSTDSPGPSQISN 3061

Query: 326  SNMITVPPNCPP 361
            + + T PP+  P
Sbjct: 3062 AAVQTTPPHLKP 3073


>AB209508-1|BAD92745.1| 2880|Homo sapiens myeloid/lymphoid or
            mixed-lineage leukemia (trithorax homolog, Drosophila)
            vari protein.
          Length = 2880

 Score = 30.3 bits (65), Expect = 8.3
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
 Frame = +2

Query: 149  ITVPPNCPGGQQWINGQCRDVWRNAATPSNMITVPPNC-LPGQVYINGQCRDVWRNEASP 325
            I+ PP C   +Q  +G  +D+ RN++TP   + V P   +  Q Y+         ++ S 
Sbjct: 1915 ISSPP-CGSVEQG-HGNNQDLTRNSSTPGLQVPVSPTVPIQNQKYVPNSTDSPGPSQISN 1972

Query: 326  SNMITVPPNCPP 361
            + + T PP+  P
Sbjct: 1973 AAVQTTPPHLKP 1984


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,289,178
Number of Sequences: 237096
Number of extensions: 2816373
Number of successful extensions: 9477
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9460
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)