Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16f18f
(793 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
M12598-1|AAA27733.1| 77|Apis mellifera protein ( Bee preprosec... 35 0.001
AY082691-1|AAL92482.1| 77|Apis mellifera preprosecapin protein. 35 0.001
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 25 0.81
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 25 0.81
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 4.3
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 4.3
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 4.3
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 4.3
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 4.3
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 4.3
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 4.3
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 4.3
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 22 5.7
>M12598-1|AAA27733.1| 77|Apis mellifera protein ( Bee
preprosecapin mRNA, complete cds. ).
Length = 77
Score = 34.7 bits (76), Expect = 0.001
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 416 PSNMITVPPNCPPGQVYINGQCRDI 490
P +I VPP CPPG +I +CR I
Sbjct: 51 PRYIIDVPPRCPPGSKFIKNRCRVI 75
Score = 31.9 bits (69), Expect = 0.007
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 134 DSRNVITVPPNCPGGQQWINGQCR 205
+ R +I VPP CP G ++I +CR
Sbjct: 50 EPRYIIDVPPRCPPGSKFIKNRCR 73
Score = 30.3 bits (65), Expect = 0.021
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 230 PSNMITVPPNCLPGQVYINGQCR 298
P +I VPP C PG +I +CR
Sbjct: 51 PRYIIDVPPRCPPGSKFIKNRCR 73
Score = 29.9 bits (64), Expect = 0.028
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 323 PSNMITVPPNCPPGQVYINGQWR 391
P +I VPP CPPG +I + R
Sbjct: 51 PRYIIDVPPRCPPGSKFIKNRCR 73
>AY082691-1|AAL92482.1| 77|Apis mellifera preprosecapin protein.
Length = 77
Score = 34.7 bits (76), Expect = 0.001
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 416 PSNMITVPPNCPPGQVYINGQCRDI 490
P +I VPP CPPG +I +CR I
Sbjct: 51 PRYIIDVPPRCPPGSKFIKNRCRVI 75
Score = 31.9 bits (69), Expect = 0.007
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 134 DSRNVITVPPNCPGGQQWINGQCR 205
+ R +I VPP CP G ++I +CR
Sbjct: 50 EPRYIIDVPPRCPPGSKFIKNRCR 73
Score = 30.3 bits (65), Expect = 0.021
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 230 PSNMITVPPNCLPGQVYINGQCR 298
P +I VPP C PG +I +CR
Sbjct: 51 PRYIIDVPPRCPPGSKFIKNRCR 73
Score = 29.9 bits (64), Expect = 0.028
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 323 PSNMITVPPNCPPGQVYINGQWR 391
P +I VPP CPPG +I + R
Sbjct: 51 PRYIIDVPPRCPPGSKFIKNRCR 73
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 25.0 bits (52), Expect = 0.81
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 504 FLDYLKKGSLPRSQIFLEM 560
F+ LK G LPR Q+F M
Sbjct: 80 FMQLLKHGMLPRGQVFTMM 98
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 25.0 bits (52), Expect = 0.81
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 504 FLDYLKKGSLPRSQIFLEM 560
F+ LK G LPR Q+F M
Sbjct: 80 FMQLLKHGMLPRGQVFTMM 98
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.3
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = -2
Query: 270 PGRQLGGTVIMLEGVAALRHTSRHCPLIHCCPP 172
P R +G V M E + RH P PP
Sbjct: 133 PSRPMGPWVPMQEQIPRFRHIGPSTPFPQFIPP 165
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.3
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = -2
Query: 270 PGRQLGGTVIMLEGVAALRHTSRHCPLIHCCPP 172
P R +G V M E + RH P PP
Sbjct: 133 PSRPMGPWVPMQEQIPRFRHIGPSTPFPRFIPP 165
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.3
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = -2
Query: 270 PGRQLGGTVIMLEGVAALRHTSRHCPLIHCCPP 172
P R +G V M E + RH P PP
Sbjct: 133 PSRPMGPWVPMQEQIPRFRHIGPSTPFPRFIPP 165
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.3
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = -2
Query: 270 PGRQLGGTVIMLEGVAALRHTSRHCPLIHCCPP 172
P R +G V M E + RH P PP
Sbjct: 133 PSRPMGPWVPMQEQIPRFRHIGPSTPFPRFIPP 165
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.3
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = -2
Query: 270 PGRQLGGTVIMLEGVAALRHTSRHCPLIHCCPP 172
P R +G V M E + RH P PP
Sbjct: 133 PSRPMGPWVPMQEQIPRFRHIGPSTPFPRFIPP 165
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.3
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = -2
Query: 270 PGRQLGGTVIMLEGVAALRHTSRHCPLIHCCPP 172
P R +G V M E + RH P PP
Sbjct: 133 PSRPMGPWVPMQEQIPRFRHIGPSTPFPRFIPP 165
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.3
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = -2
Query: 270 PGRQLGGTVIMLEGVAALRHTSRHCPLIHCCPP 172
P R +G V M E + RH P PP
Sbjct: 133 PSRPMGPWVPMQEQIPRFRHIGPSTPFPRFIPP 165
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 22.6 bits (46), Expect = 4.3
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = -2
Query: 270 PGRQLGGTVIMLEGVAALRHTSRHCPLIHCCPP 172
P R +G V M E + RH P PP
Sbjct: 136 PSRPMGPWVPMQEQIPRFRHIGPSTPFPRFIPP 168
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 22.2 bits (45), Expect = 5.7
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -1
Query: 784 KYIILNFRSFKLSVETTLIDRGWSVRG 704
KY++ F +S+ T+I W+ RG
Sbjct: 298 KYLLFTFIMNTVSILVTVIIINWNFRG 324
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,247
Number of Sequences: 438
Number of extensions: 5799
Number of successful extensions: 34
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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