Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16f13f
         (698 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3573|AAM68241.1|  122|Drosophila melanogaster CG30413-P...    36   0.040
AE014298-1339|ABC67180.1|  117|Drosophila melanogaster CG34026-P...    30   2.6  
BT001662-1|AAN71417.1|  181|Drosophila melanogaster RE47391p pro...    29   4.6  
AE014297-1159|AAN13476.1|  181|Drosophila melanogaster CG31394-P...    29   4.6  
BT023029-1|AAY55445.1|  112|Drosophila melanogaster IP04046p pro...    29   6.1  
AE013599-1627|AAF58432.1|  112|Drosophila melanogaster CG13323-P...    29   6.1  
AF243382-1|AAF68440.1| 1548|Drosophila melanogaster cytoplasmic ...    29   8.0  
AE013599-1628|AAF58431.1|  112|Drosophila melanogaster CG13324-P...    29   8.0  

>AE013599-3573|AAM68241.1|  122|Drosophila melanogaster CG30413-PA
           protein.
          Length = 122

 Score = 36.3 bits (80), Expect = 0.040
 Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 2/116 (1%)
 Frame = +1

Query: 67  LFVLVIVTAVAADEEAGVRSNGRPDLVIGTITSQDSLIRSFRFNRPASPSS-QSHFHRIA 243
           +F+L++ T V   + A   S    D   GT  + D+LI S    +  S     +  + + 
Sbjct: 6   VFLLLVGTHVCFID-ANFGSGEGNDYTYGTQATTDTLIASETITKSKSLLGITTKTYTLT 64

Query: 244 MAAGVR-ISAITAREVGQTQNPTIRVAGGGIGFNNVNLEARNARGRGFSYNVQIWG 408
            A   + I+ I   ++ + +  T  +  GG+G   V ++  +ARG G    V I+G
Sbjct: 65  QAGTAKTITYIKITDLKKMRGATAEITSGGVGSTTVTIKFTSARGAGIKSQVVIYG 120


>AE014298-1339|ABC67180.1|  117|Drosophila melanogaster CG34026-PA
           protein.
          Length = 117

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +1

Query: 262 ISAITAREVGQTQNPTIRVAGGGIGFNNVNLEARNARGRGFSYNVQIWGR 411
           I+AI   +  ++   T  +  GG G     ++  + RG G    V+IWGR
Sbjct: 68  ITAIKITDKKKSHGATAVLVSGGPGSKGATIKFTSERGYGIKDIVEIWGR 117


>BT001662-1|AAN71417.1|  181|Drosophila melanogaster RE47391p
           protein.
          Length = 181

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -2

Query: 637 LPENVYICRNIYFYRNIYTYIIL 569
           L + VYIC ++Y Y  IYTY+ +
Sbjct: 18  LKKRVYICIHLYIYIYIYTYLYI 40


>AE014297-1159|AAN13476.1|  181|Drosophila melanogaster CG31394-PA
           protein.
          Length = 181

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -2

Query: 637 LPENVYICRNIYFYRNIYTYIIL 569
           L + VYIC ++Y Y  IYTY+ +
Sbjct: 18  LKKRVYICIHLYIYIYIYTYLYI 40


>BT023029-1|AAY55445.1|  112|Drosophila melanogaster IP04046p
           protein.
          Length = 112

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +1

Query: 301 NPTIRVAGGGIGFNNVNLEARNARGRGFSYNVQIWGR 411
           +P++   G G  F  VNL  R    RG +  V+IWGR
Sbjct: 78  SPSLYSGGPGYRFATVNL--RGQVNRGINSTVEIWGR 112


>AE013599-1627|AAF58432.1|  112|Drosophila melanogaster CG13323-PA
           protein.
          Length = 112

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +1

Query: 301 NPTIRVAGGGIGFNNVNLEARNARGRGFSYNVQIWGR 411
           +P++   G G  F  VNL  R    RG +  V+IWGR
Sbjct: 78  SPSLYSGGPGYRFATVNL--RGQVNRGINSTVEIWGR 112


>AF243382-1|AAF68440.1| 1548|Drosophila melanogaster cytoplasmic
           protein encore protein.
          Length = 1548

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 7/63 (11%)
 Frame = +3

Query: 234 QDRYGRRRSHIC------HHGPGSGANPEPDYPGRWWRHRLQQRQS*GPKRARPR-ILLQ 392
           ++ Y R RS I       H G   G   E  Y G W + + QQ+QS  P+  RP   +LQ
Sbjct: 417 EEDYDRARSRIFSRTGDNHEGYSGGGGDEECYGG-WEQQQQQQKQSQPPRPKRPNGKMLQ 475

Query: 393 RTN 401
             N
Sbjct: 476 MQN 478


>AE013599-1628|AAF58431.1|  112|Drosophila melanogaster CG13324-PA
           protein.
          Length = 112

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 301 NPTIRVAGGGIGFNNVNLEARNARGRGFSYNVQIWGR 411
           +P++   G G  F  VNL  R    RG    V+IWGR
Sbjct: 78  SPSLYSGGPGYRFATVNL--RGQVNRGIDSTVEIWGR 112


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,919,430
Number of Sequences: 53049
Number of extensions: 723475
Number of successful extensions: 2180
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2180
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)