Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16f13f
         (698 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          24   1.6  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          24   1.6  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          24   1.6  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          24   1.6  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          24   1.6  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          24   1.6  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          24   1.6  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    24   1.6  
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    23   3.7  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    23   3.7  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   4.9  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   4.9  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   4.9  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   6.4  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   6.4  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   8.5  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   8.5  

>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 261 ANAGGHSDPVEVRLRTRRRWSIETKR 184
           +  G  S   E RLR RR W I+ +R
Sbjct: 23  SETGLRSRTQEERLRRRREWMIQQER 48


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 261 ANAGGHSDPVEVRLRTRRRWSIETKR 184
           +  G  S   E RLR RR W I+ +R
Sbjct: 23  SETGLRSRTQEERLRRRREWMIQQER 48


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 261 ANAGGHSDPVEVRLRTRRRWSIETKR 184
           +  G  S   E RLR RR W I+ +R
Sbjct: 23  SETGLRSRTQEERLRRRREWMIQQER 48


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 261 ANAGGHSDPVEVRLRTRRRWSIETKR 184
           +  G  S   E RLR RR W I+ +R
Sbjct: 23  SETGLRSRTQEERLRRRREWMIQQER 48


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 261 ANAGGHSDPVEVRLRTRRRWSIETKR 184
           +  G  S   E RLR RR W I+ +R
Sbjct: 23  SETGLRSRTQEERLRRRREWMIQQER 48


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 261 ANAGGHSDPVEVRLRTRRRWSIETKR 184
           +  G  S   E RLR RR W I+ +R
Sbjct: 23  SETGLRSRTQEERLRRRREWMIQQER 48


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 261 ANAGGHSDPVEVRLRTRRRWSIETKR 184
           +  G  S   E RLR RR W I+ +R
Sbjct: 23  SETGLRSRTQEERLRRRREWMIQQER 48


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 261 ANAGGHSDPVEVRLRTRRRWSIETKR 184
           +  G  S   E RLR RR W I+ +R
Sbjct: 23  SETGLRSRTQEERLRRRREWMIQQER 48


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 58  FTLLFVLVIVTAVAADE 108
           + LLFVLV +T V A++
Sbjct: 4   YILLFVLVTITCVIAED 20


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 58  FTLLFVLVIVTAVAADE 108
           + LLFVLV +T V A++
Sbjct: 4   YILLFVLVTITCVIAED 20


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -3

Query: 150 NHQVRSTVRSHA 115
           NH  RST RSHA
Sbjct: 259 NHNERSTPRSHA 270


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -3

Query: 150 NHQVRSTVRSHA 115
           NH  RST RSHA
Sbjct: 259 NHNERSTPRSHA 270


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -3

Query: 150 NHQVRSTVRSHA 115
           NH  RST RSHA
Sbjct: 259 NHNERSTPRSHA 270


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 11/50 (22%), Positives = 25/50 (50%)
 Frame = +2

Query: 266 LPSRPGKWGKPRTRLSGSLVAASASTTSILRPETRAAEDSPTTYKSGDDK 415
           LP+  GKW   ++    S+ ++       +  +T   ++SP+ + S D++
Sbjct: 363 LPNCCGKWSSQKSEPRRSIYSSLLRYPRSIFRQTDDHQNSPSIFISDDNQ 412


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +3

Query: 468 CVNETTNRISRSKI 509
           CV+  +NRISR+++
Sbjct: 32  CVSRISNRISRNRV 45


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 575 NICIYVTVKVDIAANVHIF 631
           N+CI   VKV  AA+  +F
Sbjct: 166 NVCIAAAVKVPSAADDRMF 184


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 575 NICIYVTVKVDIAANVHIF 631
           N+CI   VKV  AA+  +F
Sbjct: 256 NVCIAAAVKVPSAADDRMF 274


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,934
Number of Sequences: 438
Number of extensions: 4612
Number of successful extensions: 20
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)