Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16f10f
         (769 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL590383-2|CAH71374.2| 2279|Homo sapiens zinc finger protein 318...    32   2.0  
AL583834-6|CAI14459.2| 2279|Homo sapiens zinc finger protein 318...    32   2.0  

>AL590383-2|CAH71374.2| 2279|Homo sapiens zinc finger protein 318
           protein.
          Length = 2279

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 26/66 (39%), Positives = 29/66 (43%)
 Frame = +3

Query: 552 SGDPTR*TRLVSVAAPTSGCCSITRSRGPRSQGGNVHSGTSVSEGWTRRVSPGRARPPTA 731
           SG  +   R  S   P SG  S T +R PRS  G+     S S    RRVSP    PP A
Sbjct: 29  SGSSSGPARRSSPPPPPSGSSSRTPARRPRSPSGHRGRRASPSPPRGRRVSPS---PPRA 85

Query: 732 LIQGPS 749
               PS
Sbjct: 86  RRGSPS 91


>AL583834-6|CAI14459.2| 2279|Homo sapiens zinc finger protein 318
           protein.
          Length = 2279

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 26/66 (39%), Positives = 29/66 (43%)
 Frame = +3

Query: 552 SGDPTR*TRLVSVAAPTSGCCSITRSRGPRSQGGNVHSGTSVSEGWTRRVSPGRARPPTA 731
           SG  +   R  S   P SG  S T +R PRS  G+     S S    RRVSP    PP A
Sbjct: 29  SGSSSGPARRSSPPPPPSGSSSRTPARRPRSPSGHRGRRASPSPPRGRRVSPS---PPRA 85

Query: 732 LIQGPS 749
               PS
Sbjct: 86  RRGSPS 91


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,942,104
Number of Sequences: 237096
Number of extensions: 2600253
Number of successful extensions: 7181
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7181
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)