Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16f04r
(877 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0689 - 30937621-30937665,30938143-30938208,30938303-309383... 238 4e-63
06_01_0981 + 7613381-7614086,7614203-7614282,7614883-7614960,761... 229 2e-60
04_01_0110 + 1123238-1123450,1124211-1124997,1126126-1126403 150 1e-36
12_01_0535 + 4208410-4208661,4209529-4209627,4210125-4210265,421... 87 2e-17
09_04_0744 - 19867604-19867686,19868075-19869872,19870777-198708... 30 2.1
08_02_0944 + 22868885-22870387 29 3.7
06_02_0155 + 12380452-12381012 29 3.7
04_01_0364 - 4771649-4771975 29 3.7
06_03_1259 - 28800954-28802468 29 4.9
03_06_0296 + 32901696-32901892,32901989-32902232,32903992-329041... 29 4.9
01_06_1453 - 37465665-37466627 29 4.9
01_06_1374 + 36740860-36741365,36742529-36743003,36743084-36743890 29 4.9
09_04_0479 - 17948043-17949037,17949554-17949715,17949809-179502... 29 6.5
04_03_0367 + 14970511-14970697,14970862-14970869 29 6.5
01_06_0208 - 27540077-27540992,27541310-27541497 29 6.5
01_05_0270 - 20271859-20272866,20273043-20273058,20273455-202737... 29 6.5
11_06_0437 - 23533218-23536382 28 8.5
08_02_0274 - 15192670-15192983,15193110-15193200,15193295-151936... 28 8.5
07_03_1649 - 28385289-28385358,28387039-28387877 28 8.5
05_05_0050 + 21916020-21916489,21916906-21917380,21917472-21918278 28 8.5
03_02_0797 - 11296426-11297258,11297745-11297901 28 8.5
>02_05_0689 -
30937621-30937665,30938143-30938208,30938303-30938356,
30938489-30938560,30938648-30938743,30939883-30939960,
30940485-30940564,30940662-30941343
Length = 390
Score = 238 bits (583), Expect = 4e-63
Identities = 111/190 (58%), Positives = 141/190 (74%)
Frame = -3
Query: 818 KYRADGGVTFALYGDGAANQGQLFEAYNMSKLWDLPCVFVCENNGYGMGTSVDRSSASTE 639
KYR + TFALYGDGAANQGQLFEA N+S LW LP + VCENN YGMGT+ R++ S
Sbjct: 183 KYRKEETATFALYGDGAANQGQLFEALNISALWKLPAILVCENNHYGMGTAEWRAAKSPA 242
Query: 638 YYTRGDYVPGVWVDGMDVLATREAARFAIEYCNAGKGPLVMEMETYRYSGHSMSDPGTSY 459
YY RGDYVPG+ VDGMDVLA ++A +FA E+ A GP+V+EM+TYRY GHSMSDPG++Y
Sbjct: 243 YYKRGDYVPGLKVDGMDVLAVKQACKFAKEHAIA-NGPIVLEMDTYRYHGHSMSDPGSTY 301
Query: 458 RTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGI 279
RTRDE+ VRQ RDPI ++ IL H+L T +LKD++ ++RKEVD+A ++K P
Sbjct: 302 RTRDEISGVRQERDPIERVRKLILAHDLATAAELKDMEKEIRKEVDDAIAKAKESPMPDT 361
Query: 278 EELSADIYYK 249
EL ++Y K
Sbjct: 362 SELFTNVYVK 371
>06_01_0981 +
7613381-7614086,7614203-7614282,7614883-7614960,
7615166-7615261,7615370-7615441,7615676-7615729,
7615819-7615884,7616291-7616335
Length = 398
Score = 229 bits (561), Expect = 2e-60
Identities = 107/197 (54%), Positives = 141/197 (71%), Gaps = 2/197 (1%)
Frame = -3
Query: 818 KYRADGGVTFALYGDGAANQGQLFEAYNMSKLWDLPCVFVCENNGYGMGTSVDRSSASTE 639
+YR + VTF LYGDGAANQGQLFEA NM+ LW LP V VCENN YGMGT+ R+S S
Sbjct: 191 RYRKEAAVTFDLYGDGAANQGQLFEALNMAALWKLPVVLVCENNHYGMGTAEWRASKSPA 250
Query: 638 YYTRGDYVPGVWVDGMDVLATREAARFAIEYCNAGKGPLVMEMETYRYSGHSMSDPGTSY 459
YY RGDYVPG+ VDGMDVLA ++A +FA ++ GP+++EM+TYRY GHSMSDPG++Y
Sbjct: 251 YYKRGDYVPGLKVDGMDVLAVKQACKFAKQHA-LENGPIILEMDTYRYHGHSMSDPGSTY 309
Query: 458 RTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGI 279
RTRDE+ +RQ RDPI ++ +L H+ T +LKD++ ++RK+VD A ++K P
Sbjct: 310 RTRDEIAGIRQERDPIERVRKLLLAHDFATTQELKDMEKEIRKQVDTAIAKAKESPMPDP 369
Query: 278 EELSADIYYKN--LEPF 234
EL ++Y + LE F
Sbjct: 370 SELFTNVYVNDCGLESF 386
>04_01_0110 + 1123238-1123450,1124211-1124997,1126126-1126403
Length = 425
Score = 150 bits (364), Expect = 1e-36
Identities = 78/171 (45%), Positives = 104/171 (60%), Gaps = 2/171 (1%)
Frame = -3
Query: 797 VTFALYGDGAANQGQLFEAYNMSKLWDLPCVFVCENNGYGMGTSVDRSSASTEYYTRGDY 618
VT A +GDG N GQ FE NM++LW LP VFV ENN + +G S R+++ E Y +G
Sbjct: 217 VTLAFFGDGTCNNGQFFECLNMAQLWKLPIVFVVENNLWAIGMSHLRATSDPEIYKKGPA 276
Query: 617 --VPGVWVDGMDVLATREAARFAIEYCNAGKGPLVMEMETYRYSGHSMSDPGTSYRTRDE 444
+PGV VDGMDVL RE A+ AIE G+GP ++E ETYR+ GHS++DP R DE
Sbjct: 277 FGMPGVHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADP-DELRRPDE 335
Query: 443 VQEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEP 291
RDPIT+ K+ I+ L T +LK I+ K+ V+EA + + P
Sbjct: 336 KSHY-AARDPITALKKYIIEQNLATESELKSIEKKIDDVVEEAVEFADASP 385
>12_01_0535 +
4208410-4208661,4209529-4209627,4210125-4210265,
4210378-4210560,4210664-4210821,4210905-4211004,
4211085-4211196,4211241-4211419,4211489-4211674,
4211762-4211929
Length = 525
Score = 87.0 bits (206), Expect = 2e-17
Identities = 54/191 (28%), Positives = 88/191 (46%), Gaps = 15/191 (7%)
Frame = -3
Query: 782 YGDGAANQGQLFEAYNMSKLWDLPCVFVCENNGYGMGTSVDRSSASTEYYTR-------- 627
+GDG ++G A N + + + P +F C NNG+ + T S Y
Sbjct: 304 FGDGGTSEGDFHAALNFAAVMEAPVIFFCRNNGWAISTPTSEQFRSDLYNNLNSTAIAGD 363
Query: 626 GDYVPG-------VWVDGMDVLATREAARFAIEYCNAGKGPLVMEMETYRYSGHSMSDPG 468
G + G + VDG D LA A A E P+++E TYR HS SD
Sbjct: 364 GAVIRGQAYGMRSIRVDGNDALAVYSAVHTAREMAIKEGRPILVEALTYRVGHHSTSDDS 423
Query: 467 TSYRTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPE 288
T YR DE++ R RDPI+ +++ + + + ++ VR+E+ +A + ++ P+
Sbjct: 424 TKYRPVDEIEHWRTARDPISRYRKWVQGNGWWCDEDESELRNNVRQELLKAIQVAERMPK 483
Query: 287 VGIEELSADIY 255
+ EL D+Y
Sbjct: 484 PPLAELFTDVY 494
>09_04_0744 -
19867604-19867686,19868075-19869872,19870777-19870801,
19872313-19872710
Length = 767
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 396 LLERSDGVSGLPHLLHLVSRPIRRAGVRHRMTRV 497
LL+ DG+SG+PHL +L +++ G + + +
Sbjct: 691 LLDSKDGLSGVPHLTNLNELLVKKCGEKENLMEI 724
>08_02_0944 + 22868885-22870387
Length = 500
Score = 29.5 bits (63), Expect = 3.7
Identities = 25/72 (34%), Positives = 33/72 (45%)
Frame = -3
Query: 419 DPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSADIYYKNLE 240
D IT+ E + L P ++ AKVR E+D A KT E I L Y + +
Sbjct: 301 DTITATVEWAMAELLRNPSEM----AKVRAEMDGALGGKKTVDEPDIARLP---YLQAVV 353
Query: 239 PFVRGIHPAAPL 204
+HPAAPL
Sbjct: 354 KEAMRLHPAAPL 365
>06_02_0155 + 12380452-12381012
Length = 186
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 416 GLWSASPPAPRLSSDTTCRGPTSNDQ 493
G A+PPAP S DT R PT D+
Sbjct: 50 GNGGAAPPAPATSPDTEVRAPTYGDK 75
>04_01_0364 - 4771649-4771975
Length = 108
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +1
Query: 757 PWLAAPS--PYRANVTPPSARYLWGEGHSSSQTGPAHQQSRC 876
P+ AAP P +V +A WG GH S+ G H++ RC
Sbjct: 47 PYPAAPELGPIECSVGAAAAAREWG-GHRCSRVGGYHRRERC 87
>06_03_1259 - 28800954-28802468
Length = 504
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +3
Query: 393 LLLERSDGVSGLPHLLHLVSRPIRRAGVRHRMTRVTVRLHLHHQRTFPCVAVLD 554
+L++ +DG SG + L+ S+ G R T TVRLH HQ P ++ D
Sbjct: 54 ILIDEADGASGGANDLYDASQLY--LGARCLATAPTVRLHKPHQAPRPVASLPD 105
>03_06_0296 +
32901696-32901892,32901989-32902232,32903992-32904112,
32904219-32904406
Length = 249
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -2
Query: 519 DGDGDVPLLWSFDVGPRHVVSDE 451
D DG VP W D R VVSD+
Sbjct: 148 DADGSVPFYWGVDPDSRLVVSDD 170
>01_06_1453 - 37465665-37466627
Length = 320
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 4/28 (14%)
Frame = -1
Query: 847 FGSWS----GLRPTSTAPTAESRSLCTE 776
FG WS G PTSTA TA + LCT+
Sbjct: 203 FGEWSSPASGNDPTSTATTATTSMLCTD 230
>01_06_1374 + 36740860-36741365,36742529-36743003,36743084-36743890
Length = 595
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 802 PSARYLWGEGHSSSQTG 852
PS RY+W +G+ +SQTG
Sbjct: 516 PSLRYIWVQGYRASQTG 532
>09_04_0479 -
17948043-17949037,17949554-17949715,17949809-17950262,
17952895-17953326
Length = 680
Score = 28.7 bits (61), Expect = 6.5
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = -3
Query: 761 QGQLFEAYNMSKLW-DLPCVF--VCENNGYGMGTSVDRSSASTEYYTRGDYVPGVW 603
QG E YN +K+W PC + V E + TS SS + Y G VP V+
Sbjct: 185 QGYFNEGYNTTKIWMSSPCSYMAVMETAAFNFSTSYLTSSVFYDTYKGG--VPVVY 238
>04_03_0367 + 14970511-14970697,14970862-14970869
Length = 64
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 507 DVPLLWSFDVGPRHVVSDERRGAGGEADQR 418
D+PL W V P E RGAGG+ ++R
Sbjct: 11 DLPLAWPGRVDPPLAGLGEGRGAGGDEEER 40
>01_06_0208 - 27540077-27540992,27541310-27541497
Length = 367
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = -1
Query: 877 GNGIVGAQVPFGS---WSGLRPTSTAPTAESRSLCTETEPPTRVNSSK 743
G + A+ P G WS L S+ P RSLC+++ P+ +S+
Sbjct: 163 GGALASARPPLGLAAVWSALAAGSSFPWLARRSLCSKSSSPSLWGASR 210
>01_05_0270 -
20271859-20272866,20273043-20273058,20273455-20273756,
20273932-20274231
Length = 541
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = -3
Query: 449 DEVQEVRQTRDPITSFKEKI-LNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEE 273
++ VR R T F E + ++ +++ +++K KE K + E GIE
Sbjct: 105 EQKPNVRYMRQITTKFSESMDISQQVIQQAHFVKMESKKEKEYFSVKKCQELAFECGIEH 164
Query: 272 LSADIY 255
SA++Y
Sbjct: 165 DSAEVY 170
>11_06_0437 - 23533218-23536382
Length = 1054
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -3
Query: 380 ELVTPDQL-KDIDAKVRKEVDEATKQSKTEPEVGIEELSADIYYKNLEPF 234
+LV P+ + +D+ RK VD K + ++ +E ADI +K EP+
Sbjct: 166 KLVEPNLVGRDVVHACRKLVDLVIKNKEKTADIENKEKKADIEHKKKEPY 215
>08_02_0274 -
15192670-15192983,15193110-15193200,15193295-15193603,
15193859-15193944,15196034-15196088,15196689-15196757,
15197027-15197074,15198090-15198203,15198464-15198526,
15199236-15199427,15199519-15199643,15199723-15199779,
15200209-15200332,15200478-15200543,15200656-15200738,
15200916-15201036,15201663-15201773,15201841-15201936,
15202032-15202107,15202878-15203016,15203283-15203346,
15203454-15203527,15203845-15203923,15204473-15204547
Length = 876
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -3
Query: 458 RTRDEVQEVRQTRDPITSFKEKILN-HELVTPDQLKDIDAKVR 333
RTRDE+ +V++ +D +T +K+ + E PD +I V+
Sbjct: 546 RTRDELMDVQRIKDAMTQIYQKLQDIKESAQPDVRHEISQLVK 588
>07_03_1649 - 28385289-28385358,28387039-28387877
Length = 302
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +3
Query: 435 LLHLVSRPIRRAGVRHRMT-RVT-VRLHL 515
++HLVS P+ A V HR T R++ V LHL
Sbjct: 43 VVHLVSTPVNLAAVAHRRTDRISLVELHL 71
>05_05_0050 + 21916020-21916489,21916906-21917380,21917472-21918278
Length = 583
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 784 RANVTPPSARYLWGEGHSSSQTG 852
RA + PS RY+W +G+ +S+TG
Sbjct: 498 RAIRSMPSLRYVWVQGYKASKTG 520
>03_02_0797 - 11296426-11297258,11297745-11297901
Length = 329
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +2
Query: 416 GLWSASPPAPRLSSDTTCRGPTSNDQSNGTSPS-PSPKD 529
G S PAP LSS T S D G PS P+ D
Sbjct: 206 GAQSGGTPAPELSSTTAGSSSLSTDSGAGAQPSWPTQAD 244
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,405,520
Number of Sequences: 37544
Number of extensions: 504271
Number of successful extensions: 2218
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2213
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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