Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16f04r
(877 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47812-8|CAD59156.1| 414|Caenorhabditis elegans Hypothetical pr... 293 1e-79
Z47812-7|CAA87793.1| 397|Caenorhabditis elegans Hypothetical pr... 293 1e-79
AL021480-5|CAJ21557.1| 432|Caenorhabditis elegans Hypothetical ... 88 9e-18
AL021480-4|CAA16329.2| 431|Caenorhabditis elegans Hypothetical ... 88 9e-18
AF039040-6|AAB94185.2| 1029|Caenorhabditis elegans Hypothetical ... 50 2e-06
AF025461-8|AAB71000.1| 286|Caenorhabditis elegans Hypothetical ... 39 0.005
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 32 0.47
AL031621-3|CAA20935.2| 740|Caenorhabditis elegans Hypothetical ... 32 0.47
Z75711-6|CAB00037.3| 387|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z81509-7|CAJ85751.1| 544|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z81509-6|CAB04153.2| 431|Caenorhabditis elegans Hypothetical pr... 29 4.4
AF040652-7|AAB95017.1| 210|Caenorhabditis elegans Hypothetical ... 29 4.4
Z92829-7|CAB07347.1| 284|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z81453-4|CAB03794.1| 283|Caenorhabditis elegans Hypothetical pr... 29 5.8
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 29 5.8
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 29 5.8
AC025724-9|AAG23382.1| 77|Caenorhabditis elegans Hypothetical ... 29 5.8
Z77657-6|CAB01150.2| 607|Caenorhabditis elegans Hypothetical pr... 28 7.6
AF043704-3|AAK21473.2| 823|Caenorhabditis elegans Sulfate perme... 28 7.6
>Z47812-8|CAD59156.1| 414|Caenorhabditis elegans Hypothetical
protein T05H10.6b protein.
Length = 414
Score = 293 bits (718), Expect = 1e-79
Identities = 133/198 (67%), Positives = 160/198 (80%)
Frame = -3
Query: 818 KYRADGGVTFALYGDGAANQGQLFEAYNMSKLWDLPCVFVCENNGYGMGTSVDRSSASTE 639
KYR V LYGDGAANQGQLFEA NM+KLWDLP +FVCENNG+GMGT+ +RSSASTE
Sbjct: 193 KYREQKNVCVTLYGDGAANQGQLFEATNMAKLWDLPVLFVCENNGFGMGTTAERSSASTE 252
Query: 638 YYTRGDYVPGVWVDGMDVLATREAARFAIEYCNAGKGPLVMEMETYRYSGHSMSDPGTSY 459
YYTRGDYVPG+WVDGMD+LA REA ++A EYC++GKGPL+MEM TYRY GHSMSDPGTSY
Sbjct: 253 YYTRGDYVPGIWVDGMDILAVREATKWAKEYCDSGKGPLMMEMATYRYHGHSMSDPGTSY 312
Query: 458 RTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGI 279
RTR+E+QEVR+TRDPIT FK++I+ L T ++LK ID +VRKEVDEA K + ++ +
Sbjct: 313 RTREEIQEVRKTRDPITGFKDRIITSSLATEEELKAIDKEVRKEVDEALKIATSDGVLPP 372
Query: 278 EELSADIYYKNLEPFVRG 225
E L ADIY+ +RG
Sbjct: 373 EALYADIYHNTPAQEIRG 390
>Z47812-7|CAA87793.1| 397|Caenorhabditis elegans Hypothetical
protein T05H10.6a protein.
Length = 397
Score = 293 bits (718), Expect = 1e-79
Identities = 133/198 (67%), Positives = 160/198 (80%)
Frame = -3
Query: 818 KYRADGGVTFALYGDGAANQGQLFEAYNMSKLWDLPCVFVCENNGYGMGTSVDRSSASTE 639
KYR V LYGDGAANQGQLFEA NM+KLWDLP +FVCENNG+GMGT+ +RSSASTE
Sbjct: 176 KYREQKNVCVTLYGDGAANQGQLFEATNMAKLWDLPVLFVCENNGFGMGTTAERSSASTE 235
Query: 638 YYTRGDYVPGVWVDGMDVLATREAARFAIEYCNAGKGPLVMEMETYRYSGHSMSDPGTSY 459
YYTRGDYVPG+WVDGMD+LA REA ++A EYC++GKGPL+MEM TYRY GHSMSDPGTSY
Sbjct: 236 YYTRGDYVPGIWVDGMDILAVREATKWAKEYCDSGKGPLMMEMATYRYHGHSMSDPGTSY 295
Query: 458 RTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGI 279
RTR+E+QEVR+TRDPIT FK++I+ L T ++LK ID +VRKEVDEA K + ++ +
Sbjct: 296 RTREEIQEVRKTRDPITGFKDRIITSSLATEEELKAIDKEVRKEVDEALKIATSDGVLPP 355
Query: 278 EELSADIYYKNLEPFVRG 225
E L ADIY+ +RG
Sbjct: 356 EALYADIYHNTPAQEIRG 373
>AL021480-5|CAJ21557.1| 432|Caenorhabditis elegans Hypothetical
protein Y39E4A.3b protein.
Length = 432
Score = 87.8 bits (208), Expect = 9e-18
Identities = 53/183 (28%), Positives = 83/183 (45%), Gaps = 2/183 (1%)
Frame = -3
Query: 797 VTFALYGDGAANQGQLFEAYNMSKLWDLPCVFVCENNGYGMGTSVDRSSASTEYYTRGDY 618
+ +GDGAA++G A+N + P +F C NNGY + T +G
Sbjct: 216 IAVVYFGDGAASEGDAHAAFNFAATLKCPIIFFCRNNGYAISTPTSEQYGGDGIAGKGPA 275
Query: 617 --VPGVWVDGMDVLATREAARFAIEYCNAGKGPLVMEMETYRYSGHSMSDPGTSYRTRDE 444
+ + VDG D+LA A + A + P+++E TYR HS SD T+YR+ DE
Sbjct: 276 YGLHTIRVDGNDLLAVYNATKEARRVALTNR-PVLIEAMTYRLGHHSTSDDSTAYRSSDE 334
Query: 443 VQEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSA 264
VQ PIT FK+ I ++ + +V+K V ++ + +L
Sbjct: 335 VQTWGDKDHPITRFKKYITERGWWNEEKEMEWQKEVKKRVLTEFAAAEKRKKAHYHDLFE 394
Query: 263 DIY 255
D+Y
Sbjct: 395 DVY 397
>AL021480-4|CAA16329.2| 431|Caenorhabditis elegans Hypothetical
protein Y39E4A.3a protein.
Length = 431
Score = 87.8 bits (208), Expect = 9e-18
Identities = 53/183 (28%), Positives = 83/183 (45%), Gaps = 2/183 (1%)
Frame = -3
Query: 797 VTFALYGDGAANQGQLFEAYNMSKLWDLPCVFVCENNGYGMGTSVDRSSASTEYYTRGDY 618
+ +GDGAA++G A+N + P +F C NNGY + T +G
Sbjct: 215 IAVVYFGDGAASEGDAHAAFNFAATLKCPIIFFCRNNGYAISTPTSEQYGGDGIAGKGPA 274
Query: 617 --VPGVWVDGMDVLATREAARFAIEYCNAGKGPLVMEMETYRYSGHSMSDPGTSYRTRDE 444
+ + VDG D+LA A + A + P+++E TYR HS SD T+YR+ DE
Sbjct: 275 YGLHTIRVDGNDLLAVYNATKEARRVALTNR-PVLIEAMTYRLGHHSTSDDSTAYRSSDE 333
Query: 443 VQEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSA 264
VQ PIT FK+ I ++ + +V+K V ++ + +L
Sbjct: 334 VQTWGDKDHPITRFKKYITERGWWNEEKEMEWQKEVKKRVLTEFAAAEKRKKAHYHDLFE 393
Query: 263 DIY 255
D+Y
Sbjct: 394 DVY 396
>AF039040-6|AAB94185.2| 1029|Caenorhabditis elegans Hypothetical
protein T22B11.5 protein.
Length = 1029
Score = 50.0 bits (114), Expect = 2e-06
Identities = 44/178 (24%), Positives = 78/178 (43%), Gaps = 7/178 (3%)
Frame = -3
Query: 812 RADGGVTFALYGDGA-ANQGQLFEAYNMSKLWDLP---CVFVCENNGYGMGTSVDRSSAS 645
+ D + L+GD A A QG + E +N+ L + + NN G T RSS S
Sbjct: 403 KCDRTMAILLHGDAAFAGQGVVLETFNLDDLPSYTTHGAIHIVVNNQIGFTTD-PRSSRS 461
Query: 644 TEYYTRGDYVPGV---WVDGMDVLATREAARFAIEYCNAGKGPLVMEMETYRYSGHSMSD 474
+ Y T V G V+ D A A ++ K +++++ YR GH+ D
Sbjct: 462 SPYCTDVGRVVGCPIFHVNVDDPEAVMHVCNVAADWRKTFKKDVIVDLVCYRRHGHNELD 521
Query: 473 PGTSYRTRDEVQEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSK 300
+ Q ++QT+ + ++EKILN + +K+ K +++A + ++
Sbjct: 522 E-PMFTQPLMYQRIKQTKTALEKYQEKILNEGVANEQYVKEELTKYGSILEDAYENAQ 578
>AF025461-8|AAB71000.1| 286|Caenorhabditis elegans Hypothetical
protein M01D1.9 protein.
Length = 286
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = -3
Query: 389 LNH--ELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSADIYYK-NLEPFVRGIH 219
LNH +++P + V E DEA +S +E E + +Y+K ++PF + I+
Sbjct: 102 LNHFLSIISPSNIDLFHFPVYNEFDEAQFKSLSECLESHEIYNLHVYWKFEMDPFFKVIN 161
Query: 218 PAAPLKHLEVQPRNH 174
P KHL++ P H
Sbjct: 162 AFLPTKHLKIHPTFH 176
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 32.3 bits (70), Expect = 0.47
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = -3
Query: 410 TSFKEKILNHELVTPDQLKDIDAKV-RKEVDEATKQSKTEPEVGIEELSADIYYKNLE 240
TS +++N ++L++ +V K+V+ TKQ+K E E + + ++YYKNL+
Sbjct: 261 TSDLNEVVNALYEGFEELQEEKLRVLSKQVERKTKQAKVEEERKLIDQQNEVYYKNLK 318
>AL031621-3|CAA20935.2| 740|Caenorhabditis elegans Hypothetical
protein F28H6.6 protein.
Length = 740
Score = 32.3 bits (70), Expect = 0.47
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = -3
Query: 434 VRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEVDEATKQSKTEPEVGIEELSADIY 255
+RQTR+ + + +L + K A ++KE + TK +K E I EL +
Sbjct: 361 IRQTRETLDIELQIMLKDSINPKSHAKTFAALLKKERETRTKHAKVFMEAKINELDMGNF 420
Query: 254 YKNLEPF 234
Y+ + F
Sbjct: 421 YETYDSF 427
>Z75711-6|CAB00037.3| 387|Caenorhabditis elegans Hypothetical
protein K02B12.8 protein.
Length = 387
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -2
Query: 456 DERRGAGGEADQRPHHFVQGEDLESRARHARSAQGYRRQGT*RSRR 319
D GG + R HHF Q + A++ RSA G+ RQ RR
Sbjct: 318 DSSLPTGGGSAIRVHHFKQNSRITPIAQNRRSAAGFDRQQIQEMRR 363
>Z81509-7|CAJ85751.1| 544|Caenorhabditis elegans Hypothetical
protein F21A3.2b protein.
Length = 544
Score = 29.1 bits (62), Expect = 4.4
Identities = 25/94 (26%), Positives = 37/94 (39%), Gaps = 1/94 (1%)
Frame = -3
Query: 818 KYRADGGVTFALYGD-GAANQGQLFEAYNMSKLWDLPCVFVCENNGYGMGTSVDRSSAST 642
K R DGG +A+YGD G N L M++ L V + Y M S
Sbjct: 190 KEREDGGFIYAVYGDLGVENGRSLGHIQKMAQKGQLDMVLHVGDFAYNMDES--NGETGD 247
Query: 641 EYYTRGDYVPGVWVDGMDVLATREAARFAIEYCN 540
E++ + + V G ++ M + E Y N
Sbjct: 248 EFFRQIEPVAG-YIPYMATVGNHEYYNNFTHYVN 280
>Z81509-6|CAB04153.2| 431|Caenorhabditis elegans Hypothetical
protein F21A3.2a protein.
Length = 431
Score = 29.1 bits (62), Expect = 4.4
Identities = 25/94 (26%), Positives = 37/94 (39%), Gaps = 1/94 (1%)
Frame = -3
Query: 818 KYRADGGVTFALYGD-GAANQGQLFEAYNMSKLWDLPCVFVCENNGYGMGTSVDRSSAST 642
K R DGG +A+YGD G N L M++ L V + Y M S
Sbjct: 77 KEREDGGFIYAVYGDLGVENGRSLGHIQKMAQKGQLDMVLHVGDFAYNMDES--NGETGD 134
Query: 641 EYYTRGDYVPGVWVDGMDVLATREAARFAIEYCN 540
E++ + + V G ++ M + E Y N
Sbjct: 135 EFFRQIEPVAG-YIPYMATVGNHEYYNNFTHYVN 167
>AF040652-7|AAB95017.1| 210|Caenorhabditis elegans Hypothetical
protein T05A8.6 protein.
Length = 210
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 820 TSTAPTAESRSLCTETEPPTRVNSSKPTTC 731
T+TAPT CT T PT + TTC
Sbjct: 83 TTTAPTTTKAPDCTTTTAPTTTKAPDCTTC 112
>Z92829-7|CAB07347.1| 284|Caenorhabditis elegans Hypothetical
protein F10A3.11 protein.
Length = 284
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 671 TSVDRSSASTEYYTRGDYVPGVWVDG 594
+S DR+ A+ EY G+Y VW+DG
Sbjct: 192 SSEDRTRAAKEYGDVGNYQSYVWIDG 217
>Z81453-4|CAB03794.1| 283|Caenorhabditis elegans Hypothetical
protein B0250.6 protein.
Length = 283
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 109 NTFVIFFNCGIYMAIPLVEIIYFCNGNTICYLR 11
N +++F CG + PL + YFC N+ CY R
Sbjct: 139 NQYMLFGYCGNVLETPLECVNYFCAVNS-CYYR 170
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 28.7 bits (61), Expect = 5.8
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Frame = -3
Query: 440 QEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEV-DEATKQSKTEP-EVGIEELS 267
Q ++ + IT+F+ K+ +T ++ K A+V ++ D A S+ + V EEL+
Sbjct: 1238 QRPQEALNVITAFEAKL---NKLTEERNKMRKARVALDLSDSAHAPSEGDKLTVATEELA 1294
Query: 266 A--DIYYKNLEPFVRGIHPAAPLKHLEVQPR 180
A D++ K L+P GI A L VQPR
Sbjct: 1295 AMKDVW-KALQPVYTGIDEAKEKTWLSVQPR 1324
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 28.7 bits (61), Expect = 5.8
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Frame = -3
Query: 440 QEVRQTRDPITSFKEKILNHELVTPDQLKDIDAKVRKEV-DEATKQSKTEP-EVGIEELS 267
Q ++ + IT+F+ K+ +T ++ K A+V ++ D A S+ + V EEL+
Sbjct: 1238 QRPQEALNVITAFEAKL---NKLTEERNKMRKARVALDLSDSAHAPSEGDKLTVATEELA 1294
Query: 266 A--DIYYKNLEPFVRGIHPAAPLKHLEVQPR 180
A D++ K L+P GI A L VQPR
Sbjct: 1295 AMKDVW-KALQPVYTGIDEAKEKTWLSVQPR 1324
>AC025724-9|AAG23382.1| 77|Caenorhabditis elegans Hypothetical
protein Y67D8C.1 protein.
Length = 77
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = -3
Query: 392 ILNHELVTP--DQLKDIDAKVRKEVDEATKQSKTEPE 288
I N + TP DQ+KDID+K +K + T + K EP+
Sbjct: 8 IENTHVTTPIIDQIKDIDSKNKKNIQ--TVREKNEPK 42
>Z77657-6|CAB01150.2| 607|Caenorhabditis elegans Hypothetical
protein F08H9.1 protein.
Length = 607
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/82 (20%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = -3
Query: 497 YSGHSMSDPGTSYRTRDEVQEVRQTRDPITSFKEKILNHEL--VTPDQLKDIDAKVRKEV 324
YS DP YR +V +++ +PI F K N ++ + + + D+ + +V
Sbjct: 357 YSSLHFKDPEPLYRKTSKVMNLKELLNPIPYFLRKGCNTDMWDLFKVKTRKFDSTIGHDV 416
Query: 323 DEATKQSKTEPEVGIEELSADI 258
+ ++ + E L A++
Sbjct: 417 SDTEEEDEDEETERRNRLKAEL 438
>AF043704-3|AAK21473.2| 823|Caenorhabditis elegans Sulfate permease
family protein 6 protein.
Length = 823
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -3
Query: 293 PEVGIEELSADIYYKNLEPFVRGIHPAAPLKHLEVQ 186
P + I + IY+ N E FVR IH A L L V+
Sbjct: 560 PGIKIFRFDSPIYFGNSEMFVRKIHQACGLNPLIVR 595
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,947,905
Number of Sequences: 27780
Number of extensions: 399696
Number of successful extensions: 1929
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1927
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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