Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16f04f
         (765 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    27   0.63 
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         25   1.9  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         25   1.9  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    25   3.4  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   3.4  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    24   4.5  
DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist mic...    23   7.8  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   7.8  
AJ973472-1|CAJ01519.1|  168|Anopheles gambiae hypothetical prote...    23   7.8  
AJ697732-1|CAG26925.1|  168|Anopheles gambiae putative chemosens...    23   7.8  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 27.1 bits (57), Expect = 0.63
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
 Frame = -2

Query: 713 ATPAPNGTCAPTIPLPP*KLRPYKCMEPPLPREQPVLRPVSS--ESTPSTLTPMR*VHP* 540
           A+PAP  + AP +P       P +  +PP  R  P  R       S P    P+R + P 
Sbjct: 82  ASPAPQPSLAPVVPSSVVTAPPARPSQPPTTRFAPEPRAEVKFVPSVPLKTPPVRPLLPQ 141

Query: 539 QR 534
           Q+
Sbjct: 142 QQ 143


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 618 GATGPAPRQLREHPQHTNAHEI 553
           G+ GP P Q   H QH + H++
Sbjct: 82  GSDGPMPAQPPHHHQHPHHHQL 103


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 618 GATGPAPRQLREHPQHTNAHEI 553
           G+ GP P Q   H QH + H++
Sbjct: 82  GSDGPMPAQPPHHHQHPHHHQL 103


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -3

Query: 682 QQSRCHHRSCVRTNAWNLPCPGSNRSC 602
           + SRC HR C +   ++   P   ++C
Sbjct: 17  EASRCVHRRCPKNEVYSCCAPCPQKAC 43


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = +1

Query: 118  LQKDH*INLGFIEIIIDKMSKLIPSAAKFLAGNTITKVTAPVVATNAKYSTKKEATFEIK 297
            LQK   + +GF  +I+     LI  +A       I + TA   + N  +ST++ + F +K
Sbjct: 2993 LQKGF-LTVGFYSLIVSLRMSLISESA-------IPEFTAAEASINVLFSTEQFSDFIVK 3044

Query: 298  P 300
            P
Sbjct: 3045 P 3045


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -1

Query: 723 VGEGHSSSQRDLRTNNPVATIEVASVQMHGTSLAP 619
           +G+ HSSS+   R++   +     S  MH  S AP
Sbjct: 232 IGKNHSSSKNMPRSSTSKSISSANSFPMHVVSSAP 266


>DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist
           michelob_x protein.
          Length = 201

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 16/59 (27%), Positives = 24/59 (40%)
 Frame = -1

Query: 711 HSSSQRDLRTNNPVATIEVASVQMHGTSLAPGATGPAPRQLREHPQHTNAHEISPSVTT 535
           H  +Q +L     +A +E  S  +   + APG  GP    +        A  + PS TT
Sbjct: 38  HLQAQLNLVHQQQLA-LEQQSAAISTNTAAPGTAGPNAATVTAATPQPPAASMPPSTTT 95


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +3

Query: 459 VFRTRSRGSRYESSDARCR-LSNHRVSLSR 545
           V R+RSRGSR  S  ++ R  S  R S SR
Sbjct: 428 VSRSRSRGSRSRSRTSQSRSRSKTRTSRSR 457


>AJ973472-1|CAJ01519.1|  168|Anopheles gambiae hypothetical protein
           protein.
          Length = 168

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 228 SDCTGCSDKRKIQHEK 275
           SDC  CS+K++I  +K
Sbjct: 72  SDCVKCSEKQRIGSDK 87


>AJ697732-1|CAG26925.1|  168|Anopheles gambiae putative chemosensory
           protein CSP3 protein.
          Length = 168

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 228 SDCTGCSDKRKIQHEK 275
           SDC  CS+K++I  +K
Sbjct: 72  SDCVKCSEKQRIGSDK 87


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 801,733
Number of Sequences: 2352
Number of extensions: 17274
Number of successful extensions: 33
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)