Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16f03r
         (905 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY029257-1|AAK38745.1| 1342|Homo sapiens WD repeat membrane prot...    33   1.1  
AB046858-1|BAB13464.1|  905|Homo sapiens KIAA1638 protein protein.     33   1.1  

>AY029257-1|AAK38745.1| 1342|Homo sapiens WD repeat membrane protein
           protein.
          Length = 1342

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 20/51 (39%), Positives = 26/51 (50%)
 Frame = +1

Query: 526 DKCRVLSEMSFKPNKLLTLDILLYIVETNVCGYFYI*YKEFNKDSKRPFAV 678
           DKCR+L          LT D L+Y  +T V  YFYI   +F  D + P +V
Sbjct: 474 DKCRILCHA-------LTSDFLIYGTDTGVVQYFYIEDWQFVNDYRHPVSV 517


>AB046858-1|BAB13464.1|  905|Homo sapiens KIAA1638 protein protein.
          Length = 905

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 20/51 (39%), Positives = 26/51 (50%)
 Frame = +1

Query: 526 DKCRVLSEMSFKPNKLLTLDILLYIVETNVCGYFYI*YKEFNKDSKRPFAV 678
           DKCR+L          LT D L+Y  +T V  YFYI   +F  D + P +V
Sbjct: 140 DKCRILCHA-------LTSDFLIYGTDTGVVQYFYIEDWQFVNDYRHPVSV 183


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,663,578
Number of Sequences: 237096
Number of extensions: 2245005
Number of successful extensions: 3365
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3365
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)