Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16f03r
         (905 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    27   0.31 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.8  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         22   6.7  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    22   6.7  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    22   6.7  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   8.8  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 26.6 bits (56), Expect = 0.31
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 573 FNPRYIIIYCGDQCMW 620
           +NPRY + Y G +C W
Sbjct: 57  YNPRYPLPYSGSKCTW 72


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
 Frame = -3

Query: 150 TPVTTATLRYVNDEE--PTPSTSSGATI 73
           TPVT   LR   +EE    PS   G TI
Sbjct: 349 TPVTQGLLRVKKEEELQEAPSCGGGPTI 376


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 159 LLFTPVTTATLRYVNDEE 106
           L ++PV + +L YVN E+
Sbjct: 265 LYYSPVASTSLYYVNTEQ 282


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 159 LLFTPVTTATLRYVNDEE 106
           L ++PV + +L YVN E+
Sbjct: 265 LYYSPVASTSLYYVNTEQ 282


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 159 LLFTPVTTATLRYVNDEE 106
           L ++PV + +L YVN E+
Sbjct: 265 LYYSPVASTSLYYVNTEQ 282


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 646 ILYTKYKNIHIHWSPQYIIIY 584
           I Y+ +  I ++W P  +IIY
Sbjct: 202 ITYSLFGMIMMYWFPLVVIIY 222


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,540
Number of Sequences: 438
Number of extensions: 4565
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)