Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16e22r
(894 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 35 0.001
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 29 0.057
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 29 0.057
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 29 0.057
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 29 0.057
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 29 0.057
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 29 0.057
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 29 0.057
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 29 0.057
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 22 6.6
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 22 6.6
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 22 6.6
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 22 6.6
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 22 6.6
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 22 6.6
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 22 6.6
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 34.7 bits (76), Expect = 0.001
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = -1
Query: 576 NSSNISTQESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLE-ERNKKLRVKADILE 400
N S+ S + K+++LR+++NE RSR + + + E I E ER + +K ILE
Sbjct: 4 NISSYSHHDEKFKQLRNEDNEIDLRSRTKEERLQHRREAWLIQQEREREHQRLMKKMILE 63
Query: 399 ELTKKVKD 376
+++++
Sbjct: 64 YELRRIRE 71
Score = 24.2 bits (50), Expect = 1.6
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = -1
Query: 819 DNEDRRTHLSKRKHLDSDDSDETYTPFAEQTSRKYKRKKS 700
D + H K+K L+ S + Y+ E+ + YK + S
Sbjct: 249 DRRYEKLHNEKKKLLEERTSRKRYSRSREREQKSYKNENS 288
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 29.1 bits (62), Expect = 0.057
Identities = 16/67 (23%), Positives = 33/67 (49%)
Frame = -1
Query: 576 NSSNISTQESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNKKLRVKADILEE 397
N++N S + ++R+ R +++E RSR + + E + ER + K ILE
Sbjct: 4 NTTNHSHHDERFRQSRSEDSETGLRSRTQEERLRRRREWMIQQEREREHERLKKKMILEY 63
Query: 396 LTKKVKD 376
++ ++
Sbjct: 64 ELRRARE 70
Score = 22.6 bits (46), Expect = 5.0
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = -1
Query: 867 NDYEPVTPKSESQLDSDNEDRR---THLSKRKHLDSDDSDETYTPFAEQTSRKYKRKK 703
ND E + S+ + +DRR H + KHL S Y+ E+ + YK ++
Sbjct: 247 NDGERSCSRDRSR-EYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNER 303
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 29.1 bits (62), Expect = 0.057
Identities = 16/67 (23%), Positives = 33/67 (49%)
Frame = -1
Query: 576 NSSNISTQESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNKKLRVKADILEE 397
N++N S + ++R+ R +++E RSR + + E + ER + K ILE
Sbjct: 4 NTTNHSHHDERFRQSRSEDSETGLRSRTQEERLRRRREWMIQQEREREHERLKKKMILEY 63
Query: 396 LTKKVKD 376
++ ++
Sbjct: 64 ELRRARE 70
Score = 22.6 bits (46), Expect = 5.0
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = -1
Query: 867 NDYEPVTPKSESQLDSDNEDRR---THLSKRKHLDSDDSDETYTPFAEQTSRKYKRKK 703
ND E + S+ + +DRR H + KHL S Y+ E+ + YK ++
Sbjct: 247 NDGERSCSRDRSR-EYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNER 303
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 29.1 bits (62), Expect = 0.057
Identities = 16/67 (23%), Positives = 33/67 (49%)
Frame = -1
Query: 576 NSSNISTQESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNKKLRVKADILEE 397
N++N S + ++R+ R +++E RSR + + E + ER + K ILE
Sbjct: 4 NTTNHSHHDERFRQSRSEDSETGLRSRTQEERLRRRREWMIQQEREREHERLKKKMILEY 63
Query: 396 LTKKVKD 376
++ ++
Sbjct: 64 ELRRARE 70
Score = 22.6 bits (46), Expect = 5.0
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = -1
Query: 867 NDYEPVTPKSESQLDSDNEDRR---THLSKRKHLDSDDSDETYTPFAEQTSRKYKRKK 703
ND E + S+ + +DRR H + KHL S Y+ E+ + YK ++
Sbjct: 247 NDGERSCSRDRSR-EYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNER 303
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 29.1 bits (62), Expect = 0.057
Identities = 16/67 (23%), Positives = 33/67 (49%)
Frame = -1
Query: 576 NSSNISTQESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNKKLRVKADILEE 397
N++N S + ++R+ R +++E RSR + + E + ER + K ILE
Sbjct: 4 NTTNHSHHDERFRQSRSEDSETGLRSRTQEERLRRRREWMIQQEREREHERLKKKMILEY 63
Query: 396 LTKKVKD 376
++ ++
Sbjct: 64 ELRRARE 70
Score = 22.6 bits (46), Expect = 5.0
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = -1
Query: 867 NDYEPVTPKSESQLDSDNEDRR---THLSKRKHLDSDDSDETYTPFAEQTSRKYKRKK 703
ND E + S+ + +DRR H + KHL S Y+ E+ + YK ++
Sbjct: 247 NDGERSCSRDRSR-EYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNER 303
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 29.1 bits (62), Expect = 0.057
Identities = 16/67 (23%), Positives = 33/67 (49%)
Frame = -1
Query: 576 NSSNISTQESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNKKLRVKADILEE 397
N++N S + ++R+ R +++E RSR + + E + ER + K ILE
Sbjct: 4 NTTNHSHHDERFRQSRSEDSETGLRSRTQEERLRRRREWMIQQEREREHERLKKKMILEY 63
Query: 396 LTKKVKD 376
++ ++
Sbjct: 64 ELRRARE 70
Score = 22.6 bits (46), Expect = 5.0
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = -1
Query: 867 NDYEPVTPKSESQLDSDNEDRR---THLSKRKHLDSDDSDETYTPFAEQTSRKYKRKK 703
ND E + S+ + +DRR H + KHL S Y+ E+ + YK ++
Sbjct: 247 NDGERSCSRDRSR-EYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNER 303
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 29.1 bits (62), Expect = 0.057
Identities = 16/67 (23%), Positives = 33/67 (49%)
Frame = -1
Query: 576 NSSNISTQESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNKKLRVKADILEE 397
N++N S + ++R+ R +++E RSR + + E + ER + K ILE
Sbjct: 4 NTTNHSHHDERFRQSRSEDSETGLRSRTQEERLRRRREWMIQQEREREHERLKKKMILEY 63
Query: 396 LTKKVKD 376
++ ++
Sbjct: 64 ELRRARE 70
Score = 22.6 bits (46), Expect = 5.0
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = -1
Query: 867 NDYEPVTPKSESQLDSDNEDRR---THLSKRKHLDSDDSDETYTPFAEQTSRKYKRKK 703
ND E + S+ + +DRR H + KHL S Y+ E+ + YK ++
Sbjct: 247 NDGERSCSRDRSR-EYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNER 303
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 29.1 bits (62), Expect = 0.057
Identities = 16/67 (23%), Positives = 33/67 (49%)
Frame = -1
Query: 576 NSSNISTQESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNKKLRVKADILEE 397
N++N S + ++R+ R +++E RSR + + E + ER + K ILE
Sbjct: 4 NTTNHSHHDERFRQSRSEDSETGLRSRTQEERLRRRREWMIQQEREREHERLKKKMILEY 63
Query: 396 LTKKVKD 376
++ ++
Sbjct: 64 ELRRARE 70
Score = 22.6 bits (46), Expect = 5.0
Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = -1
Query: 867 NDYEPVTPKSES-QLDSDNEDRRTHLSKRKHLDSDDSDETYTPFAEQTSRKYKRKK 703
ND E + S + D + H + KHL S Y+ E+ + YK ++
Sbjct: 247 NDGERSCSRDRSREYKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNER 302
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 29.1 bits (62), Expect = 0.057
Identities = 16/67 (23%), Positives = 33/67 (49%)
Frame = -1
Query: 576 NSSNISTQESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNKKLRVKADILEE 397
N++N S + ++R+ R +++E RSR + + E + ER + K ILE
Sbjct: 4 NTTNHSHHDERFRQSRSEDSETGLRSRTQEERLRRRREWMIQQEREREHERLKKKMILEY 63
Query: 396 LTKKVKD 376
++ ++
Sbjct: 64 ELRRARE 70
Score = 22.6 bits (46), Expect = 5.0
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = -1
Query: 867 NDYEPVTPKSESQLDSDNEDRR---THLSKRKHLDSDDSDETYTPFAEQTSRKYKRKK 703
ND E + S+ + +DRR H + KHL S Y+ E+ + YK ++
Sbjct: 247 NDGERSCSRDRSR-EYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNER 303
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.6
Identities = 11/47 (23%), Positives = 19/47 (40%)
Frame = -1
Query: 843 KSESQLDSDNEDRRTHLSKRKHLDSDDSDETYTPFAEQTSRKYKRKK 703
+S D + H + KHL S Y+ E+ + YK ++
Sbjct: 8 RSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNER 54
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.6
Identities = 11/47 (23%), Positives = 19/47 (40%)
Frame = -1
Query: 843 KSESQLDSDNEDRRTHLSKRKHLDSDDSDETYTPFAEQTSRKYKRKK 703
+S D + H + KHL S Y+ E+ + YK ++
Sbjct: 8 RSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNER 54
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.6
Identities = 11/47 (23%), Positives = 19/47 (40%)
Frame = -1
Query: 843 KSESQLDSDNEDRRTHLSKRKHLDSDDSDETYTPFAEQTSRKYKRKK 703
+S D + H + KHL S Y+ E+ + YK ++
Sbjct: 8 RSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNER 54
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.6
Identities = 11/47 (23%), Positives = 19/47 (40%)
Frame = -1
Query: 843 KSESQLDSDNEDRRTHLSKRKHLDSDDSDETYTPFAEQTSRKYKRKK 703
+S D + H + KHL S Y+ E+ + YK ++
Sbjct: 8 RSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNER 54
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.6
Identities = 11/47 (23%), Positives = 19/47 (40%)
Frame = -1
Query: 843 KSESQLDSDNEDRRTHLSKRKHLDSDDSDETYTPFAEQTSRKYKRKK 703
+S D + H + KHL S Y+ E+ + YK ++
Sbjct: 8 RSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNER 54
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.6
Identities = 11/47 (23%), Positives = 19/47 (40%)
Frame = -1
Query: 843 KSESQLDSDNEDRRTHLSKRKHLDSDDSDETYTPFAEQTSRKYKRKK 703
+S D + H + KHL S Y+ E+ + YK ++
Sbjct: 8 RSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNER 54
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.6
Identities = 11/47 (23%), Positives = 19/47 (40%)
Frame = -1
Query: 843 KSESQLDSDNEDRRTHLSKRKHLDSDDSDETYTPFAEQTSRKYKRKK 703
+S D + H + KHL S Y+ E+ + YK ++
Sbjct: 8 RSREYKKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNER 54
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,946
Number of Sequences: 438
Number of extensions: 5417
Number of successful extensions: 33
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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