Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16e21r
         (845 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...   196   2e-52
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.   194   6e-52
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...   194   9e-52
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...   135   6e-34
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    24   2.0  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    23   3.5  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   3.5  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase protein.
          Length = 580

 Score =  196 bits (478), Expect = 2e-52
 Identities = 96/253 (37%), Positives = 147/253 (58%)
 Frame = -2

Query: 775  GAQIPFNFDLITDVDASSSAADIKRAVDKFLTYKPVDQTANWVVGNHDNSRMATRYGASL 596
            G+ +PFNF  I D++  S+A+D K+ +D+++   P     NWV GNHDN R+A+R+G   
Sbjct: 307  GSTVPFNFMFIADLNNQSTASDFKQLIDRWVANVPNGSVTNWVSGNHDNHRVASRFGRQR 366

Query: 595  VDGINMLVLLLPGVAVTYMGEEIGLEDGYVSWEDTVDPSGCNTNDPIKYVESSRDPERTP 416
             D I ML L LPG+ V Y G+EIG+ED + ++++TVDP+GCN   P KY   SRDPERTP
Sbjct: 367  GDEIVMLTLTLPGIGVVYNGDEIGMEDRWFTYQETVDPAGCNAG-PAKYYLKSRDPERTP 425

Query: 415  FHWNPEKNAGFSTADKTWLPMAEGYETLNVEVQKASERSHLKVYKALSDLRQENTFRYGR 236
            + W+   +AGFS  +KTWLP+ E Y++LN+  QK    SH   +K+LS L+++     G 
Sbjct: 426  YQWDNSTSAGFSQTNKTWLPVNENYKSLNLAAQKREYYSHYVAFKSLSYLKKQPVIANGS 485

Query: 235  YESLALNQDIFVFKRWLNDVIYLVVVNMRDVEHNIDLTYFENVSGNVAVSIRSVNSPKNE 56
             E   ++  +   KR L +   +V++N       ++LT     +  V  +   V S  + 
Sbjct: 486  LEVDVIDGRVLSVKRELGNDTVIVMMNFSKNPVTVNLTKLHPPADLVVYACNVVGSGLSH 545

Query: 55   GDTFDAKSLPVVG 17
            G+     S+ + G
Sbjct: 546  GNWIYPASMTIPG 558


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score =  194 bits (474), Expect = 6e-52
 Identities = 95/255 (37%), Positives = 138/255 (54%), Gaps = 1/255 (0%)
 Frame = -2

Query: 775  GAQIPFNFDLITDVDASSSAADIKRAVDKFLTYKPVDQTANWVVGNHDNSRMATRYGASL 596
            GA  PFNF  I +V   S+++D K+ VD ++TY P     NWV GNHD  R+ +R+G   
Sbjct: 301  GADFPFNFAFIKNVSRDSNSSDFKKLVDNWMTYMPPSGIPNWVPGNHDQLRLVSRFGEEK 360

Query: 595  VDGINMLVLLLPGVAVTYMGEEIGLEDGYVSWEDTVDPSGCNTNDPIKYVESSRDPERTP 416
               I  + LLLPGVAV Y G+EIG+ D Y+SWEDT DP GC       Y   SRDP RTP
Sbjct: 361  ARMITTMSLLLPGVAVNYYGDEIGMSDTYISWEDTQDPQGCGAGKE-NYQTMSRDPARTP 419

Query: 415  FHWNPEKNAGFSTADKTWLPMAEGYETLNVEVQKASERSHLKVYKALSDLRQENTFRYGR 236
            F W+   +AGFS++  TWL + E Y+T+N+  +K  + S   ++K  + L++   F+   
Sbjct: 420  FQWDDSVSAGFSSSSNTWLRVNENYKTVNLAAEKKDKNSFFNMFKKFASLKKSPYFKEAN 479

Query: 235  YESLALNQDIFVFKRWLNDVIYL-VVVNMRDVEHNIDLTYFENVSGNVAVSIRSVNSPKN 59
              +  LN ++F F R   D   L  ++N  + E  +DL  F NV   + +   + NS   
Sbjct: 480  LNTRMLNDNVFAFSRETEDNGSLYAILNFSNEEQIVDLKAFNNVPKKLNMFYNNFNSDIK 539

Query: 58   EGDTFDAKSLPVVGF 14
                 +   +  +GF
Sbjct: 540  SISNNEQVKVSALGF 554


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score =  194 bits (473), Expect = 9e-52
 Identities = 94/255 (36%), Positives = 138/255 (54%), Gaps = 1/255 (0%)
 Frame = -2

Query: 775  GAQIPFNFDLITDVDASSSAADIKRAVDKFLTYKPVDQTANWVVGNHDNSRMATRYGASL 596
            GA  PFNF  I +V   S+++D K+ +D ++TY P     NWV GNHD  R+ +R+G   
Sbjct: 301  GADFPFNFAFIKNVSRDSNSSDFKKLIDNWMTYMPPSGIPNWVPGNHDQLRLVSRFGEEK 360

Query: 595  VDGINMLVLLLPGVAVTYMGEEIGLEDGYVSWEDTVDPSGCNTNDPIKYVESSRDPERTP 416
               I  + LLLPGVAV Y G+EIG+ D Y+SWEDT DP GC       Y   SRDP RTP
Sbjct: 361  ARMITTMSLLLPGVAVNYYGDEIGMSDTYISWEDTQDPQGCGAGKE-NYQTMSRDPARTP 419

Query: 415  FHWNPEKNAGFSTADKTWLPMAEGYETLNVEVQKASERSHLKVYKALSDLRQENTFRYGR 236
            F W+   +AGFS++  TWL + E Y+T+N+  +K  + S   ++K  + L++   F+   
Sbjct: 420  FQWDDSVSAGFSSSSNTWLRVNENYKTVNLAAEKKDKNSFFNMFKKFASLKKSPYFKEAN 479

Query: 235  YESLALNQDIFVFKRWLNDVIYL-VVVNMRDVEHNIDLTYFENVSGNVAVSIRSVNSPKN 59
              +  LN ++F F R   D   L  ++N  + E  +DL  F NV   + +   + NS   
Sbjct: 480  LNTRMLNDNVFAFSRETEDNGSLYAILNFSNEEQIVDLKAFNNVPKKLNMFYNNFNSDIK 539

Query: 58   EGDTFDAKSLPVVGF 14
                 +   +  +GF
Sbjct: 540  SISNNEQVKVSALGF 554


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase protein.
          Length = 588

 Score =  135 bits (326), Expect = 6e-34
 Identities = 85/259 (32%), Positives = 127/259 (49%), Gaps = 6/259 (2%)
 Frame = -2

Query: 775  GAQIPFNFDLITDVDASSSAADIKRAVDKFLTYKPVDQTANWVVGNHDNSRMATRYGASL 596
            G+ +PFNF  ITD ++SS+    K  +D ++   P +   NWV+GNHD  R+ TRY    
Sbjct: 314  GSNVPFNFKFITDANSSSTPEQFKVIIDNWIKGTPQNNVPNWVMGNHDRVRVGTRY-PGR 372

Query: 595  VDGINMLVLLLPGVAVTYMGEEIGLEDGYVSWEDTVDPSGCNTNDPIKYVESSRDPERTP 416
             D + ML ++LPGVAVTY GEEIG+ D              NT     Y    RD  RTP
Sbjct: 373  ADHMIMLEMILPGVAVTYYGEEIGMVD--------------NTT---IYKYDVRDGCRTP 415

Query: 415  FHWNPEKNAGFS-----TADKTWLPMAEGYET-LNVEVQKASERSHLKVYKALSDLRQEN 254
            F W+   NAGFS       +K WLP+   Y++ LN+E +K    SH  +Y  L+ LR+ +
Sbjct: 416  FQWDNSINAGFSKIAENLLEKNWLPVHTSYKSGLNLEQEKKDSISHYHLYTNLTALRKRD 475

Query: 253  TFRYGRYESLALNQDIFVFKRWLNDVIYLVVVNMRDVEHNIDLTYFENVSGNVAVSIRSV 74
              + G +    LN+ +    R   +    +++N       +D++   N   N  +   SV
Sbjct: 476  VLKKGNFTIEILNKTVLAVVRQSEEEAVSLLINFSKNNTIVDISKLVNKRNNAKIYTSSV 535

Query: 73   NSPKNEGDTFDAKSLPVVG 17
            NS      T +  ++ + G
Sbjct: 536  NSNLTVNQTVNPVAINIPG 554


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 7/24 (29%), Positives = 16/24 (66%)
 Frame = +3

Query: 369 LSAVENPAFFSGFQWKGVLSGSLD 440
           +S ++   +F GF W+G+ + +L+
Sbjct: 617 ISEIQKHKWFDGFNWEGLRARTLE 640


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 362 PGLVSGRESSVFLGVPMERSPFG 430
           P  V  +E  VF G+P  + P G
Sbjct: 51  PRTVLDKEVHVFYGIPFAKPPIG 73


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 362 PGLVSGRESSVFLGVPMERSPFG 430
           P  V  +E  VF G+P  + P G
Sbjct: 51  PRTVLDKEVHVFYGIPFAKPPIG 73


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 243,565
Number of Sequences: 438
Number of extensions: 5591
Number of successful extensions: 23
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27188448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)