BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16e20f
(378 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-2101|AAF48421.1| 88|Drosophila melanogaster CG9065-PA... 92 2e-19
AY119286-1|AAM51146.1| 466|Drosophila melanogaster SD27884p pro... 31 0.49
AE014297-752|AAF54236.2| 642|Drosophila melanogaster CG9684-PA ... 31 0.49
AE014297-3684|AAF56376.1| 2768|Drosophila melanogaster CG13648-P... 28 3.5
AY058341-1|AAL13570.1| 1024|Drosophila melanogaster GH11706p pro... 27 6.1
AE014297-1806|AAF55026.1| 1024|Drosophila melanogaster CG14355-P... 27 6.1
AY118778-1|AAM50638.1| 1430|Drosophila melanogaster GH12223p pro... 27 8.0
AE014134-2823|AAN10982.1| 390|Drosophila melanogaster CG31748-P... 27 8.0
AE013599-323|AAF59276.1| 1430|Drosophila melanogaster CG1845-PA ... 27 8.0
>AE014298-2101|AAF48421.1| 88|Drosophila melanogaster CG9065-PA
protein.
Length = 88
Score = 91.9 bits (218), Expect = 2e-19
Identities = 39/48 (81%), Positives = 40/48 (83%)
Frame = +1
Query: 133 EKPKLKPCCACPETKRARDACIIENGEENCGPLIEEHKACMRKMGFNI 276
EKPK K CCACPETKRARDACI+ENGEENC LIE HK CMR GFNI
Sbjct: 41 EKPKCKACCACPETKRARDACIVENGEENCLALIEAHKKCMRDAGFNI 88
>AY119286-1|AAM51146.1| 466|Drosophila melanogaster SD27884p
protein.
Length = 466
Score = 31.1 bits (67), Expect = 0.49
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 22 NNKLNCIICEKTS*KMGNASAKAVEVKVLEGPAPENVEKPKLKPCCAC 165
N +LN K + N++A+ ++ LEGP P ++++P P C
Sbjct: 297 NEQLNAFFNSKKLLRNPNSAAENIKSCSLEGPQPSHIDQPIAIPAIEC 344
>AE014297-752|AAF54236.2| 642|Drosophila melanogaster CG9684-PA
protein.
Length = 642
Score = 31.1 bits (67), Expect = 0.49
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 22 NNKLNCIICEKTS*KMGNASAKAVEVKVLEGPAPENVEKPKLKPCCAC 165
N +LN K + N++A+ ++ LEGP P ++++P P C
Sbjct: 297 NEQLNAFFNSKKLLRNPNSAAENIKSCSLEGPQPSHIDQPIAIPAIEC 344
>AE014297-3684|AAF56376.1| 2768|Drosophila melanogaster CG13648-PA
protein.
Length = 2768
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 163 CPETKRARDACIIENGEENCGPLI 234
CP TK CI+E E+ C P+I
Sbjct: 63 CPFTKPIGHDCIVEKREDQCCPII 86
>AY058341-1|AAL13570.1| 1024|Drosophila melanogaster GH11706p
protein.
Length = 1024
Score = 27.5 bits (58), Expect = 6.1
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +1
Query: 142 KLKPCCACPETKRARDACIIENGEENCGPLI 234
++ P C E K + D C++ E+C P +
Sbjct: 456 QVTPKCPKVEPKESEDYCVVNKSSEDCRPYL 486
>AE014297-1806|AAF55026.1| 1024|Drosophila melanogaster CG14355-PA
protein.
Length = 1024
Score = 27.5 bits (58), Expect = 6.1
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +1
Query: 142 KLKPCCACPETKRARDACIIENGEENCGPLI 234
++ P C E K + D C++ E+C P +
Sbjct: 456 QVTPKCPKVEPKESEDYCVVNKSSEDCRPYL 486
>AY118778-1|AAM50638.1| 1430|Drosophila melanogaster GH12223p protein.
Length = 1430
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = -2
Query: 230 SGPQFSSPFSIMHASRALFVSGQAQQGFSLGFSTFSGAGPSKTLTSTALAL 78
S P +S F++ + + G G +G S+ +G + +LTSTALA+
Sbjct: 958 SAPPTASSFALTQNNSS--GGGALASGTGIGGSSSAGTAAAASLTSTALAM 1006
>AE014134-2823|AAN10982.1| 390|Drosophila melanogaster CG31748-PA
protein.
Length = 390
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 255 HTGLVFFNKWSTVLFSIFYNACIACSFCF 169
+TG VF KWST L++I ++CI + +
Sbjct: 28 NTGRVFTKKWST-LYAIALDSCIFALYIY 55
>AE013599-323|AAF59276.1| 1430|Drosophila melanogaster CG1845-PA
protein.
Length = 1430
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = -2
Query: 230 SGPQFSSPFSIMHASRALFVSGQAQQGFSLGFSTFSGAGPSKTLTSTALAL 78
S P +S F++ + + G G +G S+ +G + +LTSTALA+
Sbjct: 958 SAPPTASSFALTQNNSS--GGGALASGTGIGGSSSAGTAAAASLTSTALAM 1006
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,816,149
Number of Sequences: 53049
Number of extensions: 275542
Number of successful extensions: 842
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1003372560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -