Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16e20f
(378 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF099919-12|AAC68797.1| 63|Caenorhabditis elegans Hypothetical... 89 7e-19
Z98877-10|CAB63406.1| 314|Caenorhabditis elegans Hypothetical p... 27 3.4
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 27 4.5
Z75713-3|CAB54301.1| 419|Caenorhabditis elegans Hypothetical pr... 27 4.5
Z75713-2|CAB00051.2| 422|Caenorhabditis elegans Hypothetical pr... 27 4.5
X51321-1|CAA35704.1| 422|Caenorhabditis elegans hypothetical pr... 27 4.5
Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z36948-2|CAA85410.1| 268|Caenorhabditis elegans Hypothetical pr... 26 7.8
U80440-3|AAK21470.2| 380|Caenorhabditis elegans Hypothetical pr... 26 7.8
>AF099919-12|AAC68797.1| 63|Caenorhabditis elegans Hypothetical
protein F40G9.2 protein.
Length = 63
Score = 89.4 bits (212), Expect = 7e-19
Identities = 38/45 (84%), Positives = 38/45 (84%)
Frame = +1
Query: 142 KLKPCCACPETKRARDACIIENGEENCGPLIEEHKACMRKMGFNI 276
KLK CCACPETKR RDACIIENGEE CG LIE HKACMR GFNI
Sbjct: 19 KLKACCACPETKRVRDACIIENGEEKCGKLIEAHKACMRAAGFNI 63
>Z98877-10|CAB63406.1| 314|Caenorhabditis elegans Hypothetical
protein Y69H2.9 protein.
Length = 314
Score = 27.5 bits (58), Expect = 3.4
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 7/45 (15%)
Frame = +1
Query: 148 KPCCACPETKRARDACIIE-------NGEENCGPLIEEHKACMRK 261
K AC E+KRA +AC++E E NC E+H+ C+ K
Sbjct: 212 KSTIACSESKRAVNACVVEFFICYTMFTEANC---TEKHENCVSK 253
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical protein
T01D3.7 protein.
Length = 2882
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = +1
Query: 67 MGNASAKAVEVKVLEGPAPENVEKPKLKPCCACPETKRARDACIIE 204
+GN+ K + + +G P + + P C CP+ K +IE
Sbjct: 1046 IGNSEPKPIHFTLYDGCEPSLCQGSCVGPLCICPQGKTGIFCDVIE 1091
>Z75713-3|CAB54301.1| 419|Caenorhabditis elegans Hypothetical
protein T01G9.2b protein.
Length = 419
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = +1
Query: 73 NASAKAVEVKVLEGPAPENVEKPKLKPCCACPETKRARDACIIENG 210
N+ K ++ + GP P E C C + + + I ENG
Sbjct: 180 NSQPKLTKMSIYRGPNPSEPESVDTPFSCYCGQNRTRKVEAIWENG 225
>Z75713-2|CAB00051.2| 422|Caenorhabditis elegans Hypothetical
protein T01G9.2a protein.
Length = 422
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = +1
Query: 73 NASAKAVEVKVLEGPAPENVEKPKLKPCCACPETKRARDACIIENG 210
N+ K ++ + GP P E C C + + + I ENG
Sbjct: 183 NSQPKLTKMSIYRGPNPSEPESVDTPFSCYCGQNRTRKVEAIWENG 228
>X51321-1|CAA35704.1| 422|Caenorhabditis elegans hypothetical
protein protein.
Length = 422
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = +1
Query: 73 NASAKAVEVKVLEGPAPENVEKPKLKPCCACPETKRARDACIIENG 210
N+ K ++ + GP P E C C + + + I ENG
Sbjct: 183 NSQPKLTKMSIYRGPNPSEPESVDTPFSCYCGQNRTRKVEAIWENG 228
>Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 26.6 bits (56), Expect = 5.9
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1
Query: 154 CCACPETKRARDACIIENGEENCGPLIEEHKACMRK 261
CC+ +T++ + C+ + G IEE C RK
Sbjct: 418 CCSISKTRKRQSECLEGQFKCGTGQCIEESLKCNRK 453
>Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 26.6 bits (56), Expect = 5.9
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1
Query: 154 CCACPETKRARDACIIENGEENCGPLIEEHKACMRK 261
CC+ +T++ + C+ + G IEE C RK
Sbjct: 418 CCSISKTRKRQSECLEGQFKCGTGQCIEESLKCNRK 453
>Z36948-2|CAA85410.1| 268|Caenorhabditis elegans Hypothetical
protein D2089.3 protein.
Length = 268
Score = 26.2 bits (55), Expect = 7.8
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = +1
Query: 151 PCCACPETKRARDACIIENGEENCGPLIEEHK 246
PC AC + DAC + G C P + +
Sbjct: 218 PCSACNQPVCMSDACSLFFGANFCAPCVSRER 249
>U80440-3|AAK21470.2| 380|Caenorhabditis elegans Hypothetical
protein T21E12.2 protein.
Length = 380
Score = 26.2 bits (55), Expect = 7.8
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -2
Query: 155 QGFSLGFSTFSGAGPSKTLTSTALALAFPIFQEVFS 48
+G ++GF+T S S ++ AF +FQ FS
Sbjct: 95 EGRTIGFNTLSSRDTSLLISQATNTTAFNMFQHSFS 130
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,971,757
Number of Sequences: 27780
Number of extensions: 151280
Number of successful extensions: 430
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 429
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 557037416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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