BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16e17f
(774 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69979-1|CAA93819.1| 127|Anopheles gambiae vacuolar ATPase prot... 215 1e-57
>Z69979-1|CAA93819.1| 127|Anopheles gambiae vacuolar ATPase
protein.
Length = 127
Score = 215 bits (525), Expect = 1e-57
Identities = 98/123 (79%), Positives = 111/123 (90%)
Frame = +1
Query: 100 MALHAAVKGKLISVIGDEDTCVGFLLGGIGEINKNRHPNFMVVDKNTPVSEIEECFKRFV 279
MAL +A+KGKLISVIG EDTCVGFLLGG+GEINKNRHPNFMVVDKNT VSEIE+CFKRF+
Sbjct: 1 MALLSAMKGKLISVIGHEDTCVGFLLGGVGEINKNRHPNFMVVDKNTAVSEIEDCFKRFI 60
Query: 280 KRXXXXXXLINQNIAELIRHVIDAHSAPVPSVLEIPSKDHPYDASKDSILRRAKGMFNPD 459
KR +INQN AELIRHVID+H+AP P+ +EIPSKDHPYDASKDSILRRAKGMFNP+
Sbjct: 61 KRDDIDIIVINQNYAELIRHVIDSHTAPTPADVEIPSKDHPYDASKDSILRRAKGMFNPE 120
Query: 460 DLV 468
D++
Sbjct: 121 DMI 123
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 785,000
Number of Sequences: 2352
Number of extensions: 16031
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80665782
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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