Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16e12r
         (810 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071239-1|AAL48861.1|   64|Drosophila melanogaster RE27904p pro...    86   5e-17
AE014296-593|AAN11541.1|   64|Drosophila melanogaster CG32276-PB...    86   5e-17
AE014296-592|AAN11540.1|   64|Drosophila melanogaster CG32276-PA...    86   5e-17
AY052147-1|AAK93571.1|  531|Drosophila melanogaster SD10674p pro...    29   9.9  
AE014296-2747|AAG22318.1|  531|Drosophila melanogaster CG32158-P...    29   9.9  
AE014296-2746|AAG22317.1|  533|Drosophila melanogaster CG32158-P...    29   9.9  
AE014296-2745|AAF49456.1|  533|Drosophila melanogaster CG32158-P...    29   9.9  

>AY071239-1|AAL48861.1|   64|Drosophila melanogaster RE27904p
           protein.
          Length = 64

 Score = 86.2 bits (204), Expect = 5e-17
 Identities = 38/46 (82%), Positives = 42/46 (91%)
 Frame = -2

Query: 809 TMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQSIRLA 672
           TMRGNVPK++K KE QYPV PWLLALFIFVVCGSA+FQI+QSIR A
Sbjct: 19  TMRGNVPKSSKTKEGQYPVGPWLLALFIFVVCGSAIFQIVQSIRAA 64


>AE014296-593|AAN11541.1|   64|Drosophila melanogaster CG32276-PB,
           isoform B protein.
          Length = 64

 Score = 86.2 bits (204), Expect = 5e-17
 Identities = 38/46 (82%), Positives = 42/46 (91%)
 Frame = -2

Query: 809 TMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQSIRLA 672
           TMRGNVPK++K KE QYPV PWLLALFIFVVCGSA+FQI+QSIR A
Sbjct: 19  TMRGNVPKSSKTKEGQYPVGPWLLALFIFVVCGSAIFQIVQSIRAA 64


>AE014296-592|AAN11540.1|   64|Drosophila melanogaster CG32276-PA,
           isoform A protein.
          Length = 64

 Score = 86.2 bits (204), Expect = 5e-17
 Identities = 38/46 (82%), Positives = 42/46 (91%)
 Frame = -2

Query: 809 TMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQSIRLA 672
           TMRGNVPK++K KE QYPV PWLLALFIFVVCGSA+FQI+QSIR A
Sbjct: 19  TMRGNVPKSSKTKEGQYPVGPWLLALFIFVVCGSAIFQIVQSIRAA 64


>AY052147-1|AAK93571.1|  531|Drosophila melanogaster SD10674p
           protein.
          Length = 531

 Score = 28.7 bits (61), Expect = 9.9
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
 Frame = +1

Query: 622 LFYCVFDSSSPVVFVI*ASLIDWIIWNT---AEPHTTKMKRA-RSQGATGYWSSF 774
           LFY VF+ S   +F + ASL+   I  T    +  TT  +R+ R  G  G+W  F
Sbjct: 236 LFYNVFNQSYADMFTVNASLLALAIIYTLCALKWQTTPRQRSLRELGCCGFWGDF 290


>AE014296-2747|AAG22318.1|  531|Drosophila melanogaster CG32158-PD,
           isoform D protein.
          Length = 531

 Score = 28.7 bits (61), Expect = 9.9
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
 Frame = +1

Query: 622 LFYCVFDSSSPVVFVI*ASLIDWIIWNT---AEPHTTKMKRA-RSQGATGYWSSF 774
           LFY VF+ S   +F + ASL+   I  T    +  TT  +R+ R  G  G+W  F
Sbjct: 236 LFYNVFNQSYADMFTVNASLLALAIIYTLCALKWQTTPRQRSLRELGCCGFWGDF 290


>AE014296-2746|AAG22317.1|  533|Drosophila melanogaster CG32158-PE,
           isoform E protein.
          Length = 533

 Score = 28.7 bits (61), Expect = 9.9
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
 Frame = +1

Query: 622 LFYCVFDSSSPVVFVI*ASLIDWIIWNT---AEPHTTKMKRA-RSQGATGYWSSF 774
           LFY VF+ S   +F + ASL+   I  T    +  TT  +R+ R  G  G+W  F
Sbjct: 238 LFYNVFNQSYADMFTVNASLLALAIIYTLCALKWQTTPRQRSLRELGCCGFWGDF 292


>AE014296-2745|AAF49456.1|  533|Drosophila melanogaster CG32158-PC,
           isoform C protein.
          Length = 533

 Score = 28.7 bits (61), Expect = 9.9
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
 Frame = +1

Query: 622 LFYCVFDSSSPVVFVI*ASLIDWIIWNT---AEPHTTKMKRA-RSQGATGYWSSF 774
           LFY VF+ S   +F + ASL+   I  T    +  TT  +R+ R  G  G+W  F
Sbjct: 238 LFYNVFNQSYADMFTVNASLLALAIIYTLCALKWQTTPRQRSLRELGCCGFWGDF 292


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,547,019
Number of Sequences: 53049
Number of extensions: 659039
Number of successful extensions: 1196
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1196
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3798466620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)