Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16e12r
         (810 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81095-2|CAB03157.1|   65|Caenorhabditis elegans Hypothetical pr...    68   9e-12
AF047660-4|AAM54169.1|   63|Caenorhabditis elegans Hypothetical ...    64   1e-10
Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical p...    29   3.9  
AL590342-1|CAC35858.1|  479|Caenorhabditis elegans Hypothetical ...    29   3.9  
AL032622-3|CAB63400.1|  479|Caenorhabditis elegans Y66A7A.4 prot...    29   3.9  
Z81583-4|CAB04669.1|  323|Caenorhabditis elegans Hypothetical pr...    28   9.1  
AF039050-11|AAC47941.1|  333|Caenorhabditis elegans Seven tm rec...    28   9.1  
AF016676-1|AAG24103.1|  598|Caenorhabditis elegans Hypothetical ...    28   9.1  

>Z81095-2|CAB03157.1|   65|Caenorhabditis elegans Hypothetical
           protein F59F4.2 protein.
          Length = 65

 Score = 67.7 bits (158), Expect = 9e-12
 Identities = 27/43 (62%), Positives = 36/43 (83%)
 Frame = -2

Query: 803 RGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQSIRL 675
           RGNV K+ K  ED+YP APWL+ LF+FVVCGSAVF+II+ +++
Sbjct: 21  RGNVAKSLKPAEDKYPAAPWLIGLFVFVVCGSAVFEIIRYVKM 63


>AF047660-4|AAM54169.1|   63|Caenorhabditis elegans Hypothetical
           protein T09A12.5 protein.
          Length = 63

 Score = 63.7 bits (148), Expect = 1e-10
 Identities = 25/45 (55%), Positives = 35/45 (77%)
 Frame = -2

Query: 809 TMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQSIRL 675
           T RGNVPK  K  E ++P + WL+ LFIFVVCGSA+F++I+ I++
Sbjct: 19  TQRGNVPKGNKTNESKFPTSQWLIGLFIFVVCGSAIFEVIRYIKV 63


>Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical
           protein F40G12.3 protein.
          Length = 1099

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = -1

Query: 708 CCVPD--NPINKTSLNHEDNWRTA 643
           CC P+  N +N  S+ H  NWRTA
Sbjct: 136 CCFPEVVNYLNTHSVGHVKNWRTA 159


>AL590342-1|CAC35858.1|  479|Caenorhabditis elegans Hypothetical
           protein Y66A7A.4 protein.
          Length = 479

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 15/25 (60%), Positives = 16/25 (64%)
 Frame = -1

Query: 81  ND*NEIIHFHVTNEIVDHILFCLIL 7
           N  NEII  HV NE+V H  FC IL
Sbjct: 414 NSINEIIERHVDNEVVPH-PFCAIL 437


>AL032622-3|CAB63400.1|  479|Caenorhabditis elegans Y66A7A.4
           protein.
          Length = 479

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 15/25 (60%), Positives = 16/25 (64%)
 Frame = -1

Query: 81  ND*NEIIHFHVTNEIVDHILFCLIL 7
           N  NEII  HV NE+V H  FC IL
Sbjct: 414 NSINEIIERHVDNEVVPH-PFCAIL 437


>Z81583-4|CAB04669.1|  323|Caenorhabditis elegans Hypothetical
           protein T02G6.4 protein.
          Length = 323

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 723 RSVWLCCVPDNPINKTSLNHEDNWRT 646
           RS+W CC+P    N  S   +  WRT
Sbjct: 275 RSMWSCCIPTTYYNNYSNALKIAWRT 300


>AF039050-11|AAC47941.1|  333|Caenorhabditis elegans Seven tm
           receptor protein 83 protein.
          Length = 333

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
 Frame = +1

Query: 598 LNFRWIVLLFYCVFDSSSPVVFVI*ASLIDWIIWNTAEPHTTKMKRARSQGA---TGYWS 768
           LN+  I ++ Y +F +S P++  +   +  W+   +A   T K K  + Q     T    
Sbjct: 197 LNYLNIAMIIYLIFCASIPMIISLVCGIKTWLQIRSAIDITDKSKTLQKQERQLFTALLI 256

Query: 769 SFSLVVLG-TFPLIV 810
            F +  LG T P+++
Sbjct: 257 QFIIPFLGNTVPMLI 271


>AF016676-1|AAG24103.1|  598|Caenorhabditis elegans Hypothetical
           protein F41B5.6 protein.
          Length = 598

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = -1

Query: 627 K*QHYPSKVKAQFTPASLHRHERECFRRRPLVPLTVQSWLDVSFTLTGLKRDADT 463
           K  H+P  V+      S+H    E   ++PLV LT    LD S T   +K + DT
Sbjct: 348 KANHHPLSVQHHLQQNSVHTSIAERIDQQPLVELTSGIHLD-SSTAVKIKSNLDT 401


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,912,750
Number of Sequences: 27780
Number of extensions: 366943
Number of successful extensions: 838
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)