Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16e08f
         (802 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...   341   4e-96
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...   339   1e-95
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...   336   9e-95
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   2.1  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   3.7  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   6.5  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   6.5  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    22   6.5  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   8.7  

>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score =  341 bits (838), Expect = 4e-96
 Identities = 158/248 (63%), Positives = 186/248 (75%)
 Frame = +2

Query: 59  FRYILLLSAVTLALAYKNPHYASGRTTMVHLFEWKWDDIAAECERFLGPRGFGGIQVSPP 238
           F+ IL+L   TLAL  K+PH+A+ R ++VHLFEWKW DIA ECERFL P+GFGG+Q+SPP
Sbjct: 3   FKPILVLCLATLALGQKDPHFAADRNSIVHLFEWKWSDIADECERFLAPKGFGGVQISPP 62

Query: 239 NENLVIWSRNRPWWERYQPISYRLVTRSGNENQFSNMVRRCNNVGVRIYVDAIINHMTGT 418
           NENLV+ S NRPWWERYQP+SY L TRSG+E   ++M+ RCN VGVRIYVD +INHMTG 
Sbjct: 63  NENLVVTSSNRPWWERYQPVSYILNTRSGDEAALADMISRCNAVGVRIYVDTVINHMTGM 122

Query: 419 WNENVGTGGSTADFGNWHYPAVPYGRNDFNWPHCVITGNDYNCCPDRVRNCELSGLKDLN 598
                GT GS AD    +YPAVPYG  DF   H   T N+Y      VRNCEL GL DLN
Sbjct: 123 --GGTGTAGSQADRDGKNYPAVPYGSGDF---HDSCTVNNYQDA-SNVRNCELVGLADLN 176

Query: 599 QGSDYVRQQILNYMNRLIDMGVAGFRIDAAKHMWPHDLRVIYDRLRNLNTAHGFPSGARP 778
           QGSDYVR +I+ YMN L+D+GVAGFR+DAAKHMWP DL  IY  L+NLNT HGF  G +P
Sbjct: 177 QGSDYVRSKIIEYMNHLVDLGVAGFRVDAAKHMWPADLEAIYGSLKNLNTDHGFLLGQKP 236

Query: 779 YIYQEVID 802
           +I+QEVID
Sbjct: 237 FIFQEVID 244


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score =  339 bits (834), Expect = 1e-95
 Identities = 157/248 (63%), Positives = 184/248 (74%)
 Frame = +2

Query: 59  FRYILLLSAVTLALAYKNPHYASGRTTMVHLFEWKWDDIAAECERFLGPRGFGGIQVSPP 238
           F+ IL L   TLAL  K+PH+A+ R ++VHLFEWKW DIA  CERFL P+GFGG+Q+SPP
Sbjct: 3   FKPILFLCLATLALGQKDPHFAADRNSIVHLFEWKWSDIADVCERFLAPKGFGGVQISPP 62

Query: 239 NENLVIWSRNRPWWERYQPISYRLVTRSGNENQFSNMVRRCNNVGVRIYVDAIINHMTGT 418
           NENLV+ S NRPWWERYQP+SY L TRSG+E   ++M+ RCN VGVRIYVD +INHMTG 
Sbjct: 63  NENLVVTSSNRPWWERYQPVSYILNTRSGDETALADMISRCNAVGVRIYVDTVINHMTGM 122

Query: 419 WNENVGTGGSTADFGNWHYPAVPYGRNDFNWPHCVITGNDYNCCPDRVRNCELSGLKDLN 598
                GT GS AD    +YPAVPYG  DF   H   T N+Y      VRNCEL GL DLN
Sbjct: 123 --GGTGTAGSQADRDGKNYPAVPYGSGDF---HDSCTVNNYQDA-SNVRNCELVGLADLN 176

Query: 599 QGSDYVRQQILNYMNRLIDMGVAGFRIDAAKHMWPHDLRVIYDRLRNLNTAHGFPSGARP 778
           QGSDYVR +I+ YMN L+D+GVAGFR+DAAKHMWP DL  IY  L+NLNT HGF  G +P
Sbjct: 177 QGSDYVRSKIIEYMNHLVDLGVAGFRVDAAKHMWPADLEAIYGSLKNLNTDHGFLDGQKP 236

Query: 779 YIYQEVID 802
           +I+QEVID
Sbjct: 237 FIFQEVID 244


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score =  336 bits (827), Expect = 9e-95
 Identities = 157/248 (63%), Positives = 184/248 (74%)
 Frame = +2

Query: 59  FRYILLLSAVTLALAYKNPHYASGRTTMVHLFEWKWDDIAAECERFLGPRGFGGIQVSPP 238
           F+ IL+L   TLAL    PH+A+ R ++VHLFEWKW DIA ECERFL P+GFGG+Q+SPP
Sbjct: 2   FKPILVLCLATLALGLFVPHFAADRNSIVHLFEWKWSDIADECERFLAPKGFGGVQISPP 61

Query: 239 NENLVIWSRNRPWWERYQPISYRLVTRSGNENQFSNMVRRCNNVGVRIYVDAIINHMTGT 418
           NENLV+ S NRPWWERYQP+SY L TRSG+E   ++M+ RCN VGVRIYVD +INHMTG 
Sbjct: 62  NENLVVTSSNRPWWERYQPVSYILNTRSGDEAALADMISRCNAVGVRIYVDTVINHMTGM 121

Query: 419 WNENVGTGGSTADFGNWHYPAVPYGRNDFNWPHCVITGNDYNCCPDRVRNCELSGLKDLN 598
                GT GS AD    +YPAVPYG  DF   H   T N+Y      VRNCEL GL DLN
Sbjct: 122 --GGTGTAGSQADRDGKNYPAVPYGSGDF---HDSCTVNNYQDA-SNVRNCELVGLADLN 175

Query: 599 QGSDYVRQQILNYMNRLIDMGVAGFRIDAAKHMWPHDLRVIYDRLRNLNTAHGFPSGARP 778
           QGSDYVR +I+ YMN L+D+GVAGFR+DAAKHMWP DL  IY  L+NLNT HGF  G +P
Sbjct: 176 QGSDYVRSKIIEYMNHLVDLGVAGFRVDAAKHMWPADLEAIYASLKNLNTDHGFLDGQKP 235

Query: 779 YIYQEVID 802
           +I+QEVID
Sbjct: 236 FIFQEVID 243


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +2

Query: 689 KHMWPHDLRVIYDRLRNLNTAHGFPSGARPY 781
           ++ WP+  R I  RLR+ +      S  RP+
Sbjct: 155 EYYWPNMYRTIKKRLRSCDLCQKTKSSNRPH 185


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/39 (30%), Positives = 16/39 (41%)
 Frame = +2

Query: 77  LSAVTLALAYKNPHYASGRTTMVHLFEWKWDDIAAECER 193
           L+   L   Y+ P+    R    H  +W W  I   CER
Sbjct: 32  LTTSKLLYTYRQPY---PRQKKSHPPQWTWQCINQRCER 67


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
 Frame = -3

Query: 281 PTKDGCGTRLPNSRLVAKPE----YHRILGVQGTF-RIQQRCHPTSIRRDVPWWCD 129
           P++D   T    +  V  P+    ++  L   G F  ++QRC+   +  +   WCD
Sbjct: 413 PSRDLTTTLCTKAGYVRDPDDCSIFYYCLAYNGGFVPLEQRCNAGLVFDEEKLWCD 468


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 12/48 (25%), Positives = 18/48 (37%)
 Frame = -3

Query: 227 PEYHRILGVQGTFRIQQRCHPTSIRRDVPWWCDPMHSEGFYRPTPESR 84
           P+YH+    Q  F+      P +     P    P HS      +P +R
Sbjct: 12  PKYHQQFHHQQLFQSATTEAPAAYSSSSPSGSSPQHSSSSASTSPAAR 59


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 12/48 (25%), Positives = 18/48 (37%)
 Frame = -3

Query: 227 PEYHRILGVQGTFRIQQRCHPTSIRRDVPWWCDPMHSEGFYRPTPESR 84
           P+YH+    Q  F+      P +     P    P HS      +P +R
Sbjct: 12  PKYHQQFHHQQLFQSATTEAPAAYSSSSPSGSSPQHSSSSASTSPAAR 59


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -3

Query: 743 LNCGDDRRSLANREATCALQHQF*N 669
           LNC D RR   N  + C L   F N
Sbjct: 214 LNCYDLRRVRKNYNSICELVDAFNN 238


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,763
Number of Sequences: 336
Number of extensions: 5347
Number of successful extensions: 29
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)