Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16e08f
(802 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81050-6|CAB02856.1| 713|Caenorhabditis elegans Hypothetical pr... 243 1e-64
Z66511-2|CAA91315.1| 725|Caenorhabditis elegans Hypothetical pr... 29 2.9
AL110479-18|CAB54365.1| 484|Caenorhabditis elegans Hypothetical... 29 5.1
Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 28 6.8
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 28 6.8
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 28 6.8
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 28 6.8
AL110479-29|CAB60311.2| 1044|Caenorhabditis elegans Hypothetical... 28 6.8
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ... 28 6.8
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 28 8.9
>Z81050-6|CAB02856.1| 713|Caenorhabditis elegans Hypothetical
protein C50B6.7 protein.
Length = 713
Score = 243 bits (595), Expect = 1e-64
Identities = 123/260 (47%), Positives = 165/260 (63%), Gaps = 11/260 (4%)
Frame = +2
Query: 56 MFRYILLLSAVTLALA-YKNPHYASGRTTMVHLFEWKWDDIAAECERFLGPRGFGGIQVS 232
+F ++ + S++ Y R TMVHLFEWKW D+A ECE FL G+G +QVS
Sbjct: 5 LFLFLFIKSSIAYNFYWYDKTQTLQNRQTMVHLFEWKWADVAKECENFLQYYGYGAVQVS 64
Query: 233 PPNENLVIWSRNR-PWWERYQPISYRLVTRSGNENQFSNMVRRCNNVGVRIYVDAIINHM 409
PP E+L + N PWW RYQP+SY+L +RSGNE +F +MV RCN VGVRI VD ++NHM
Sbjct: 65 PPMEHLKAFPNNNYPWWVRYQPVSYKLDSRSGNEQEFQDMVNRCNKVGVRIIVDIVMNHM 124
Query: 410 TGTWNEN---VGTGGSTADFGNWH----YPAVPYGRNDFNWPHCV--ITGNDYNCCPDRV 562
G ++ VG+ GS++ F H +P VPY DFN P C I G+DY + V
Sbjct: 125 VGIGQKSGNGVGSSGSSS-FDGTHGVQSFPGVPYSLGDFNNPKCDGDIQGSDYQNSAEHV 183
Query: 563 RNCELSGLKDLNQGSDYVRQQILNYMNRLIDMGVAGFRIDAAKHMWPHDLRVIYDRLRNL 742
++C L GL DLNQ S VR +I+ Y+N+L+DMGVAGFR DA+KHMWP D+ I + +++L
Sbjct: 184 KDCRLVGLLDLNQASATVRAKIVAYLNKLVDMGVAGFRHDASKHMWPQDILNILNDVKDL 243
Query: 743 NTAHGFPSGARPYIYQEVID 802
+ + S RP+ EVID
Sbjct: 244 R-SDIYGSNQRPFAVHEVID 262
>Z66511-2|CAA91315.1| 725|Caenorhabditis elegans Hypothetical
protein F07A11.2a protein.
Length = 725
Score = 29.5 bits (63), Expect = 2.9
Identities = 23/103 (22%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Frame = -3
Query: 335 DFHFQILLLDGRRLVDSAPTKDGCGTRLPNSRLVAKPEYHRILGVQGTFRIQQRCHPTSI 156
DF F+ L+ + ++ A +R P + ++ ++G++ R+Q P S
Sbjct: 164 DFSFRQLVETVIQQLEGAFALAFKSSRFPGQLVASRRGSPLLVGIKSNSRLQTNHFPVSF 223
Query: 155 RRDVPW-WCDPMHSEG-FYRPTPESRPKVEGCTETSLSNILDL 33
+D W W D ++G + + + E + +NILDL
Sbjct: 224 SKDAGWKWGDEKQTDGRRFMSNHATHLRDETSFVETPNNILDL 266
>AL110479-18|CAB54365.1| 484|Caenorhabditis elegans Hypothetical
protein Y105C5B.19 protein.
Length = 484
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = -1
Query: 802 VDDFLVDVGTSTGWETVGGI*I----AETIVDHSQIVRPHVLCSINSETSNTHV 653
+ D + D G + W T + + A T+ D I PH++C S+ ++T++
Sbjct: 314 ISDVVTD-GDVSNWSTANLVTLVRALARTVFDKVAIADPHMMCYATSQNASTYI 366
>Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical
protein K10D3.4 protein.
Length = 922
Score = 28.3 bits (60), Expect = 6.8
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +2
Query: 515 HCVITGNDYNCCPDRVRNCELS 580
+C G Y CCP + C LS
Sbjct: 501 YCYYDGTTYGCCPTQAYTCSLS 522
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = -3
Query: 227 PEYHRILGVQ-GTFRIQQRCHPTSIRR--DVPWWCDPMHSEGFYRPTPESRPK 78
P H I GT + H T P C+P +S+ PTP+SRP+
Sbjct: 611 PPPHLIAATSTGTHSVSSSAHSTPRHSISGTPVHCEPSNSKTSQPPTPKSRPE 663
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = -3
Query: 227 PEYHRILGVQ-GTFRIQQRCHPTSIRR--DVPWWCDPMHSEGFYRPTPESRPK 78
P H I GT + H T P C+P +S+ PTP+SRP+
Sbjct: 902 PPPHLIAATSTGTHSVSSSAHSTPRHSISGTPVHCEPSNSKTSQPPTPKSRPE 954
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = -3
Query: 227 PEYHRILGVQ-GTFRIQQRCHPTSIRR--DVPWWCDPMHSEGFYRPTPESRPK 78
P H I GT + H T P C+P +S+ PTP+SRP+
Sbjct: 917 PPPHLIAATSTGTHSVSSSAHSTPRHSISGTPVHCEPSNSKTSQPPTPKSRPE 969
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = -3
Query: 227 PEYHRILGVQ-GTFRIQQRCHPTSIRR--DVPWWCDPMHSEGFYRPTPESRPK 78
P H I GT + H T P C+P +S+ PTP+SRP+
Sbjct: 917 PPPHLIAATSTGTHSVSSSAHSTPRHSISGTPVHCEPSNSKTSQPPTPKSRPE 969
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = -3
Query: 227 PEYHRILGVQ-GTFRIQQRCHPTSIRR--DVPWWCDPMHSEGFYRPTPESRPK 78
P H I GT + H T P C+P +S+ PTP+SRP+
Sbjct: 611 PPPHLIAATSTGTHSVSSSAHSTPRHSISGTPVHCEPSNSKTSQPPTPKSRPE 663
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = -3
Query: 227 PEYHRILGVQ-GTFRIQQRCHPTSIRR--DVPWWCDPMHSEGFYRPTPESRPK 78
P H I GT + H T P C+P +S+ PTP+SRP+
Sbjct: 902 PPPHLIAATSTGTHSVSSSAHSTPRHSISGTPVHCEPSNSKTSQPPTPKSRPE 954
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = -3
Query: 227 PEYHRILGVQ-GTFRIQQRCHPTSIRR--DVPWWCDPMHSEGFYRPTPESRPK 78
P H I GT + H T P C+P +S+ PTP+SRP+
Sbjct: 917 PPPHLIAATSTGTHSVSSSAHSTPRHSISGTPVHCEPSNSKTSQPPTPKSRPE 969
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = -3
Query: 227 PEYHRILGVQ-GTFRIQQRCHPTSIRR--DVPWWCDPMHSEGFYRPTPESRPK 78
P H I GT + H T P C+P +S+ PTP+SRP+
Sbjct: 917 PPPHLIAATSTGTHSVSSSAHSTPRHSISGTPVHCEPSNSKTSQPPTPKSRPE 969
>AL110479-29|CAB60311.2| 1044|Caenorhabditis elegans Hypothetical
protein Y105C5B.2 protein.
Length = 1044
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -1
Query: 250 QILVWWRNLNTTESSGSKEPFAFSSDVIPLPFEEMY 143
Q+ W ++ TE+ G P +D + LP+ EM+
Sbjct: 313 QLPYLWNHVTNTETQGYSGPVFIGNDGVRLPYYEMH 348
>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
protein Y55F3BR.2 protein.
Length = 1594
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +2
Query: 518 CVITGNDYNCCPDRVRNCELSGLKDLNQGS 607
C G Y CCP + C L K + GS
Sbjct: 679 CTFDGLVYGCCPSKAYTCSLQVNKGIGCGS 708
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -1
Query: 490 VRNSRIVPVSEIGCASTCTNILIPSSSHVVDDGVHINPDAN 368
V +++I+P+ E G C +L+P +S + V NP N
Sbjct: 526 VPHNQIIPIEENGVTKYCAELLLPINSPIKHAIVLKNPMPN 566
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,549,691
Number of Sequences: 27780
Number of extensions: 483443
Number of successful extensions: 1384
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1381
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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