Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16e07r
(919 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 56 4e-08
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 56 4e-08
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 52 8e-07
Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical pr... 39 0.006
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 32 0.66
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 32 0.66
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 32 0.66
U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protei... 30 2.7
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z83236-8|CAE17881.1| 321|Caenorhabditis elegans Hypothetical pr... 29 6.2
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 8.1
AC006708-10|AAF60430.2| 1250|Caenorhabditis elegans Hypothetical... 28 8.1
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 56.0 bits (129), Expect = 4e-08
Identities = 67/252 (26%), Positives = 105/252 (41%), Gaps = 11/252 (4%)
Frame = -3
Query: 836 RQSRIVAGWPAEDAQIPHQISLRMXXXXXXXXXXXXSIIHHEWVLTAAHCLAN--RIN-F 666
R +R+V G+ P +LR SI+ ++TAAHC R++ +
Sbjct: 23 RIARVVGGFETVPGAFPWTAALR--NKATKAHHCGASILDKTHLITAAHCFEEDERVSSY 80
Query: 665 VVRLGLTNLTRPD-----YLVETTHKFIHPRYIEILGGVQTDDIALVKLNHH-IPYSRYI 504
V +G + + D + ++ H +P Y +I + DIA++++ + I ++ Y
Sbjct: 81 EVVVGDWDNNQTDGNEQIFYLQRIH--FYPLYKDIF----SHDIAILEIPYPGIEFNEYA 134
Query: 503 QPCRLQNSEQKNINYEGAIFTVSGYGRTDDPWNGGVASEILLWVHLRGITNE-QCLTHYP 327
QP L + + + G VSG+G G+ L L I N C+
Sbjct: 135 QPICLPSKDF--VYTPGRQCVVSGWGSM------GLRYAERLQAALIPIINRFDCVNSSQ 186
Query: 326 NSRVIQKQTLCAAYYNDTAQSSCQGDSGGPLTIVDEDGQPTMVGVVSFGHRDGC-NSPHP 150
+ + CA Y + SCQGDSGGP EDG + GV+S+G DGC P
Sbjct: 187 IYSSMSRSAFCAGYL-EGGIDSCQGDSGGPFACRREDGAFVLAGVISWG--DGCAQKKQP 243
Query: 149 SAYVRPGHYHDW 114
Y Y W
Sbjct: 244 GIYTMVAPYLSW 255
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 56.0 bits (129), Expect = 4e-08
Identities = 60/201 (29%), Positives = 93/201 (46%), Gaps = 6/201 (2%)
Frame = -3
Query: 725 IIHHEWVLTAAHCLANR---INFVVRLGLTNLTRPDYLVETTHKFIHPRYIEILGGVQTD 555
+I +VLTAAHC A ++ VR+G + + T IHP Y +G +
Sbjct: 88 LIDPNFVLTAAHCFAKDRRPTSYSVRVG-GHRSGSGSPHRVTAVSIHPWYN--IGFPSSY 144
Query: 554 DIALVKLNHHIPYSRYIQPCRLQNSEQKNINYEGAIFTVSGYGRTDDPWNGGVASEILLW 375
D A+++++ + S +P L + E + V+G+G T + +++ L
Sbjct: 145 DFAIMRIHPPVNTSTTARPICLPSLPA----VENRLCVVTGWGSTIE--GSSLSAPTLRE 198
Query: 374 VHLRGITNEQCLTHYPN--SRVIQKQTLCAAYYNDTAQSSCQGDSGGPLTIVDEDGQPTM 201
+H+ ++ C + PN R+ LCA Y S CQGDSGGPL + DG +
Sbjct: 199 IHVPLLSTLFC-SSLPNYIGRIHLPSMLCAGYSYGKIDS-CQGDSGGPL-MCARDGHWEL 255
Query: 200 VGVVSFGHRDGCNSP-HPSAY 141
GVVS+G GC P P Y
Sbjct: 256 TGVVSWG--IGCARPGMPGVY 274
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 51.6 bits (118), Expect = 8e-07
Identities = 62/227 (27%), Positives = 97/227 (42%), Gaps = 17/227 (7%)
Frame = -3
Query: 725 IIHHEWVLTAAHC---LANRINFVVRLGLTNLTRPDYLVETTHKFIHPRYIEILGGVQTD 555
+I W++TAAHC L R VR N R + E +IH Y +
Sbjct: 70 VIDDFWLVTAAHCALQLQTRSFVYVREPKNNRERSFSVKEA---YIHSGYNN---QTADN 123
Query: 554 DIALVKLNHHIPYSRYIQPCRLQNSEQKNIN-YEGAIFTVSGYGRTDDPWNGG----VAS 390
DIAL++++ + I+P L + + K + Y+ + V GYG T + G + S
Sbjct: 124 DIALLRISSDLS-KLGIKPVCLVHDDSKLLKQYKNGV--VIGYGLTLGEDSSGEPKLINS 180
Query: 389 EILLWVHLRGITNEQCLTHYP-----NSRVIQKQTLCAAYYNDTAQSSCQGDSGGPLTIV 225
+ L + I+++ C+ + + ++ Q AY + TA GDSGGPL I
Sbjct: 181 QTLQSTSVPIISDDDCVKTWRFLSLLSVKITGYQICAGAYLHGTAP----GDSGGPLLIH 236
Query: 224 DEDGQPTMVGVVSFG--HRDGC--NSPHPSAYVRPGHYHDWFYEVTG 96
+G+ +G+ S+G DG P Y R Y W V G
Sbjct: 237 KSNGEYVQIGITSYGADGLDGVIDQGKFPGVYTRISKYVPWIQGVIG 283
>Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical
protein F31D4.6 protein.
Length = 292
Score = 38.7 bits (86), Expect = 0.006
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -3
Query: 281 NDTAQSSCQGDSGGPLTIVDED-GQPTMVGVVSFGHRDGCNSPHPSAYVRPGHYHDWFYE 105
N +A +C GDSGG L D++ G+ ++ + SFG R GC S + + R Y +
Sbjct: 228 NYSAPRTCHGDSGGGLEYRDDNYGRAFLIAITSFGTR-GCPSNMLARFTRVDMYLNLICN 286
Query: 104 VTGI 93
TG+
Sbjct: 287 YTGV 290
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 31.9 bits (69), Expect = 0.66
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 254 GDSGGPLTIVDEDGQPTMVGVVSFGHRDGCN 162
GD + IVDE G+PT G+V F + CN
Sbjct: 213 GDVERAVHIVDEKGRPTGEGIVEFERKPNCN 243
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 31.9 bits (69), Expect = 0.66
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 254 GDSGGPLTIVDEDGQPTMVGVVSFGHRDGCN 162
GD + IVDE G+PT G+V F + CN
Sbjct: 213 GDVERAVHIVDEKGRPTGEGIVEFERKPNCN 243
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 31.9 bits (69), Expect = 0.66
Identities = 37/131 (28%), Positives = 56/131 (42%), Gaps = 3/131 (2%)
Frame = -3
Query: 563 QTDDIALVKLNHHIPYSRYIQPCRLQNSEQKNINYEGAIFTVSGYGRTDDPWNG--GVAS 390
Q +DI +++L I L + NI GA T G+G DP G A
Sbjct: 174 QGNDIVILELESTIDDVEGANYACLPFLPEVNIQ-SGANVTSFGWG--SDPGKGFDNAAF 230
Query: 389 EILLWVHLRGITNEQCLTHYPNSRVIQKQTLCAAYYNDTAQSSCQGDSGGPLTIVDED-G 213
++ + L T C ++ S I + C A D ++ C GDSGG LT D
Sbjct: 231 PMIQVLTLATETLATCEENWGTS--IPFDSFCTAEEED--KNVCSGDSGGGLTFHQSDSA 286
Query: 212 QPTMVGVVSFG 180
+ ++ +VS+G
Sbjct: 287 REFIIAIVSYG 297
>U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protein
111 protein.
Length = 332
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/76 (27%), Positives = 39/76 (51%)
Frame = -3
Query: 434 GYGRTDDPWNGGVASEILLWVHLRGITNEQCLTHYPNSRVIQKQTLCAAYYNDTAQSSCQ 255
G GRTDD WN +++++ + +E +++ ++ V QK++ A+ N +Q+ C
Sbjct: 49 GQGRTDDAWNE------VVFLNDKKFKSELLVSN--SATVRQKRSDLPAHCNCLSQNQCP 100
Query: 254 GDSGGPLTIVDEDGQP 207
GP DG+P
Sbjct: 101 PGPPGPPGPAGMDGKP 116
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 29.1 bits (62), Expect = 4.7
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = -1
Query: 859 SKISETRTANLAS*PVGLQKTLRSRIRSAF-VWSAPSGESAPAAVQSFTTNGS*LRPTAS 683
S ISE+ TA AS G T+ S S SA SG+ + Q + + + TAS
Sbjct: 1698 STISESSTAASASSQTGSTVTMGSSSTSGVSTSSASSGQPQMSTSQGSSAGSTVVSSTAS 1757
Query: 682 PIASTS 665
P AS++
Sbjct: 1758 PAASST 1763
>Z83236-8|CAE17881.1| 321|Caenorhabditis elegans Hypothetical
protein K10H10.10 protein.
Length = 321
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -2
Query: 453 CNLHRERLRTYR*SMERWRGVRNPVVGASAWYHQRAVSDPLPEQP 319
C HRER R R++ V Y +R ++PLP +P
Sbjct: 214 CKKHRERFRYVCPDPLRFQSFAENAVDFCVRYQERCPNEPLPAEP 258
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 8.1
Identities = 21/76 (27%), Positives = 25/76 (32%)
Frame = -2
Query: 861 HRRSPKHGPPISHRSRLACRRRSDPASDQPSYGQPRRGSQLLRRFNHSPRMGPDCGPLPR 682
H R HGPP +H R D Q RR NH G +
Sbjct: 914 HNRGHHHGPPRNHNQDRNRHRNHDGNRHQNQDRSRHHNQDRNRRQNHDRNRHQSQGRNRQ 973
Query: 681 QSHQLRGAFGLDEPDP 634
Q H+ RG +E P
Sbjct: 974 QDHE-RGDEAHEEARP 988
>AC006708-10|AAF60430.2| 1250|Caenorhabditis elegans Hypothetical
protein Y110A7A.16 protein.
Length = 1250
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Frame = -3
Query: 488 QNSEQKNINY--EGAIFTVSGYGRTDDPWNGGVAS---EILLWVHLRGITNEQCLTHYPN 324
Q+S + ++++ +G I VS Y +D N V EIL +++R I C H PN
Sbjct: 185 QHSRKTSVHWRWDGEIVAVSFYSSQNDTRNLTVFDRNGEILNNMNIRNIYLSHCFAHKPN 244
Query: 323 SRVI 312
+ ++
Sbjct: 245 ANLL 248
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,014,669
Number of Sequences: 27780
Number of extensions: 457530
Number of successful extensions: 1302
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1298
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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