Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16e07f
(743 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 46 3e-05
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 36 0.040
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 35 0.053
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z83236-8|CAE17881.1| 321|Caenorhabditis elegans Hypothetical pr... 29 4.6
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 6.1
AC006708-10|AAF60430.2| 1250|Caenorhabditis elegans Hypothetical... 28 6.1
Z70310-5|CAA94369.1| 1141|Caenorhabditis elegans Hypothetical pr... 28 8.0
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 46.0 bits (104), Expect = 3e-05
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 5/169 (2%)
Frame = +3
Query: 240 IIHHEWVLTAAHCLANR---INFVVRLGLTNLTRPDYLVETTHKFIHPRYIEILGGVQTD 410
+I +VLTAAHC A ++ VR+G + + T IHP Y +G +
Sbjct: 88 LIDPNFVLTAAHCFAKDRRPTSYSVRVG-GHRSGSGSPHRVTAVSIHPWYN--IGFPSSY 144
Query: 411 DIALVKLNHHIPYSRYIQPCRLQNSEQKNINYEGAIFTVSGYGRTDDPWNGGVASEILLW 590
D A+++++ + S +P L + E + V+G+G T + +++ L
Sbjct: 145 DFAIMRIHPPVNTSTTARPICLPSLPA----VENRLCVVTGWGSTIE--GSSLSAPTLRE 198
Query: 591 VHLRGITNEQCLTHYPN--SRVIQKQTLCAAYYNDTAQSSCQGDSGGPL 731
+H+ ++ C + PN R+ LCA Y S CQGDSGGPL
Sbjct: 199 IHVPLLSTLFC-SSLPNYIGRIHLPSMLCAGYSYGKIDS-CQGDSGGPL 245
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 35.5 bits (78), Expect = 0.040
Identities = 52/210 (24%), Positives = 87/210 (41%), Gaps = 10/210 (4%)
Frame = +3
Query: 129 RQSRIVAGWPAEDAQIPHQISLRMXXXXXXXXXXXXXIIHHEWVLTAAHCLAN--RIN-F 299
R +R+V G+ P +LR I+ ++TAAHC R++ +
Sbjct: 23 RIARVVGGFETVPGAFPWTAALR--NKATKAHHCGASILDKTHLITAAHCFEEDERVSSY 80
Query: 300 VVRLGLTNLTRPD-----YLVETTHKFIHPRYIEILGGVQTDDIALVKLNHH-IPYSRYI 461
V +G + + D + ++ H +P Y +I + DIA++++ + I ++ Y
Sbjct: 81 EVVVGDWDNNQTDGNEQIFYLQRIH--FYPLYKDIF----SHDIAILEIPYPGIEFNEYA 134
Query: 462 QPCRLQNSEQKNINYEGAIFTVSGYGRTDDPWNGGVASEILLWVHLRGITNE-QCLTHYP 638
QP L + + + G VSG+G G+ L L I N C+
Sbjct: 135 QPICLPSKDF--VYTPGRQCVVSGWGSM------GLRYAERLQAALIPIINRFDCVNSSQ 186
Query: 639 NSRVIQKQTLCAAYYNDTAQSSCQGDSGGP 728
+ + CA Y + SCQGDSGGP
Sbjct: 187 IYSSMSRSAFCAGYL-EGGIDSCQGDSGGP 215
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 35.1 bits (77), Expect = 0.053
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 13/179 (7%)
Frame = +3
Query: 240 IIHHEWVLTAAHC---LANRINFVVRLGLTNLTRPDYLVETTHKFIHPRYIEILGGVQTD 410
+I W++TAAHC L R VR N R + E +IH Y +
Sbjct: 70 VIDDFWLVTAAHCALQLQTRSFVYVREPKNNRERSFSVKEA---YIHSGY---NNQTADN 123
Query: 411 DIALVKLNHHIPYSRYIQPCRLQNSEQKNI-NYEGAIFTVSGYGRTDDPWNGG----VAS 575
DIAL++++ + I+P L + + K + Y+ + V GYG T + G + S
Sbjct: 124 DIALLRISSDLS-KLGIKPVCLVHDDSKLLKQYKNGV--VIGYGLTLGEDSSGEPKLINS 180
Query: 576 EILLWVHLRGITNEQCLTHYP-----NSRVIQKQTLCAAYYNDTAQSSCQGDSGGPLTI 737
+ L + I+++ C+ + + ++ Q AY + TA GDSGGPL I
Sbjct: 181 QTLQSTSVPIISDDDCVKTWRFLSLLSVKITGYQICAGAYLHGTA----PGDSGGPLLI 235
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 29.1 bits (62), Expect = 3.5
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +1
Query: 106 SKISETRTANLAS*PVGLQKTLRSRIRSAF-VWSAPSGESAPAAVQSFTTNGS*LRPTAS 282
S ISE+ TA AS G T+ S S SA SG+ + Q + + + TAS
Sbjct: 1698 STISESSTAASASSQTGSTVTMGSSSTSGVSTSSASSGQPQMSTSQGSSAGSTVVSSTAS 1757
Query: 283 PIASTS 300
P AS++
Sbjct: 1758 PAASST 1763
>Z83236-8|CAE17881.1| 321|Caenorhabditis elegans Hypothetical
protein K10H10.10 protein.
Length = 321
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +2
Query: 512 CNLHRERLRTYR*SMERWRGVRNPVVGASAWYHQRAVSDPLPEQP 646
C HRER R R++ V Y +R ++PLP +P
Sbjct: 214 CKKHRERFRYVCPDPLRFQSFAENAVDFCVRYQERCPNEPLPAEP 258
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 6.1
Identities = 21/76 (27%), Positives = 25/76 (32%)
Frame = +2
Query: 104 HRRSPKHGPPISHRSRLACRRRSDPASDQPSYGQPRRGSQLLRRFNHSPRMGPDCGPLPR 283
H R HGPP +H R D Q RR NH G +
Sbjct: 914 HNRGHHHGPPRNHNQDRNRHRNHDGNRHQNQDRSRHHNQDRNRRQNHDRNRHQSQGRNRQ 973
Query: 284 QSHQLRGAFGLDEPDP 331
Q H+ RG +E P
Sbjct: 974 QDHE-RGDEAHEEARP 988
>AC006708-10|AAF60430.2| 1250|Caenorhabditis elegans Hypothetical
protein Y110A7A.16 protein.
Length = 1250
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Frame = +3
Query: 477 QNSEQKNINY--EGAIFTVSGYGRTDDPWNGGVAS---EILLWVHLRGITNEQCLTHYPN 641
Q+S + ++++ +G I VS Y +D N V EIL +++R I C H PN
Sbjct: 185 QHSRKTSVHWRWDGEIVAVSFYSSQNDTRNLTVFDRNGEILNNMNIRNIYLSHCFAHKPN 244
Query: 642 SRVI 653
+ ++
Sbjct: 245 ANLL 248
>Z70310-5|CAA94369.1| 1141|Caenorhabditis elegans Hypothetical
protein R11A8.6 protein.
Length = 1141
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -2
Query: 322 FVKPKRTTKLMRLARQWAAVRTHSW 248
FVK KR +R AR WA R W
Sbjct: 440 FVKEKRFANWLRDARDWAVSRNRFW 464
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,705,595
Number of Sequences: 27780
Number of extensions: 374914
Number of successful extensions: 1030
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1027
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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