Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16e04r
(898 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051528-1|AAK92952.1| 532|Drosophila melanogaster GH18123p pro... 242 4e-64
AL024456-3|CAA19661.1| 531|Drosophila melanogaster EG:63B12.10 ... 242 4e-64
AF110234-1|AAF14250.1| 498|Drosophila melanogaster coatomer com... 242 4e-64
AE014298-266|AAF45673.1| 532|Drosophila melanogaster CG14813-PA... 242 4e-64
AY321364-1|AAP84718.1| 3241|Drosophila melanogaster PHD zinc fin... 34 0.30
AE014296-31|AAS64921.1| 3241|Drosophila melanogaster CG7036-PB, ... 34 0.30
AE014296-30|AAF47343.1| 3201|Drosophila melanogaster CG7036-PA, ... 34 0.30
>AY051528-1|AAK92952.1| 532|Drosophila melanogaster GH18123p protein.
Length = 532
Score = 242 bits (593), Expect = 4e-64
Identities = 124/261 (47%), Positives = 168/261 (64%), Gaps = 4/261 (1%)
Frame = -3
Query: 860 ASPAQHDAGKPVPAD-HKD-VHLRFEERLNLIAGRDGDIQTFELSGLLTLRISNEQFGRI 687
A+ A A + +D HK+ VHL+ E++L + GRDG +Q FE SGLLTLRI++E +GRI
Sbjct: 274 AASASAAAKAAIASDIHKESVHLKIEDKLVVRLGRDGGVQQFENSGLLTLRITDEAYGRI 333
Query: 686 HVHVDNKDSRPLQLQTHPNVDKEAFRSTGVIGLKQAQRPFPMHSDVGVLKWRLATTNDDK 507
+ + ++ LQLQTHPNVDKE F+S IGLK +PFP+++DVGVLKWR + D+
Sbjct: 334 LLKLSPNHTQGLQLQTHPNVDKELFKSRTTIGLKNLGKPFPLNTDVGVLKWRF-VSQDES 392
Query: 506 LAPLSVNCWPSEGVNGGCDVNIEYELEQDHLVLTDVNITIPLPSGNTSVVVHQWEGSYTQ 327
PL++NCWPS+ GGCDVNIEYELE L L DV I IPLP N V +++G+Y
Sbjct: 393 AVPLTINCWPSDNGEGGCDVNIEYELEAQQLELQDVAIVIPLPM-NVQPSVAEYDGTYNY 451
Query: 326 KGRN--LIWSIPLVSKQQKTGSLEFTVTPSIPNDFFPLSVTWTSETSLALLTAVKVTQAE 153
R L W IP++ K+GS+EF+ + SIP DFFPL V++ S+T A + A V Q +
Sbjct: 452 DSRKHVLQWHIPIIDAANKSGSMEFSCSASIPGDFFPLQVSFVSKTPYAGVVAQDVVQVD 511
Query: 152 DGSPVDFSQEISFHADKYEFV 90
+ V +S E +KYE V
Sbjct: 512 SEAAVKYSSESILFVEKYEIV 532
>AL024456-3|CAA19661.1| 531|Drosophila melanogaster EG:63B12.10
protein.
Length = 531
Score = 242 bits (593), Expect = 4e-64
Identities = 124/261 (47%), Positives = 168/261 (64%), Gaps = 4/261 (1%)
Frame = -3
Query: 860 ASPAQHDAGKPVPAD-HKD-VHLRFEERLNLIAGRDGDIQTFELSGLLTLRISNEQFGRI 687
A+ A A + +D HK+ VHL+ E++L + GRDG +Q FE SGLLTLRI++E +GRI
Sbjct: 273 AASASAAAKAAIASDIHKESVHLKIEDKLVVRLGRDGGVQQFENSGLLTLRITDEAYGRI 332
Query: 686 HVHVDNKDSRPLQLQTHPNVDKEAFRSTGVIGLKQAQRPFPMHSDVGVLKWRLATTNDDK 507
+ + ++ LQLQTHPNVDKE F+S IGLK +PFP+++DVGVLKWR + D+
Sbjct: 333 LLKLSPNHTQGLQLQTHPNVDKELFKSRTTIGLKNLGKPFPLNTDVGVLKWRF-VSQDES 391
Query: 506 LAPLSVNCWPSEGVNGGCDVNIEYELEQDHLVLTDVNITIPLPSGNTSVVVHQWEGSYTQ 327
PL++NCWPS+ GGCDVNIEYELE L L DV I IPLP N V +++G+Y
Sbjct: 392 AVPLTINCWPSDNGEGGCDVNIEYELEAQQLELQDVAIVIPLPM-NVQPSVAEYDGTYNY 450
Query: 326 KGRN--LIWSIPLVSKQQKTGSLEFTVTPSIPNDFFPLSVTWTSETSLALLTAVKVTQAE 153
R L W IP++ K+GS+EF+ + SIP DFFPL V++ S+T A + A V Q +
Sbjct: 451 DSRKHVLQWHIPIIDAANKSGSMEFSCSASIPGDFFPLQVSFVSKTPYAGVVAQDVVQVD 510
Query: 152 DGSPVDFSQEISFHADKYEFV 90
+ V +S E +KYE V
Sbjct: 511 SEAAVKYSSESILFVEKYEIV 531
>AF110234-1|AAF14250.1| 498|Drosophila melanogaster coatomer complex
COPI delta-COPsubunit protein.
Length = 498
Score = 242 bits (593), Expect = 4e-64
Identities = 124/261 (47%), Positives = 168/261 (64%), Gaps = 4/261 (1%)
Frame = -3
Query: 860 ASPAQHDAGKPVPAD-HKD-VHLRFEERLNLIAGRDGDIQTFELSGLLTLRISNEQFGRI 687
A+ A A + +D HK+ VHL+ E++L + GRDG +Q FE SGLLTLRI++E +GRI
Sbjct: 240 AASASAAAKAAIASDIHKESVHLKIEDKLVVRLGRDGGVQQFENSGLLTLRITDEAYGRI 299
Query: 686 HVHVDNKDSRPLQLQTHPNVDKEAFRSTGVIGLKQAQRPFPMHSDVGVLKWRLATTNDDK 507
+ + ++ LQLQTHPNVDKE F+S IGLK +PFP+++DVGVLKWR + D+
Sbjct: 300 LLKLSPNHTQGLQLQTHPNVDKELFKSRTTIGLKNLGKPFPLNTDVGVLKWRF-VSQDES 358
Query: 506 LAPLSVNCWPSEGVNGGCDVNIEYELEQDHLVLTDVNITIPLPSGNTSVVVHQWEGSYTQ 327
PL++NCWPS+ GGCDVNIEYELE L L DV I IPLP N V +++G+Y
Sbjct: 359 AVPLTINCWPSDNGEGGCDVNIEYELEAQQLELQDVAIVIPLPM-NVQPSVAEYDGTYNY 417
Query: 326 KGRN--LIWSIPLVSKQQKTGSLEFTVTPSIPNDFFPLSVTWTSETSLALLTAVKVTQAE 153
R L W IP++ K+GS+EF+ + SIP DFFPL V++ S+T A + A V Q +
Sbjct: 418 DSRKHVLQWHIPIIDAANKSGSMEFSCSASIPGDFFPLQVSFVSKTPYAGVVAQDVVQVD 477
Query: 152 DGSPVDFSQEISFHADKYEFV 90
+ V +S E +KYE V
Sbjct: 478 SEAAVKYSSESILFVEKYEIV 498
>AE014298-266|AAF45673.1| 532|Drosophila melanogaster CG14813-PA
protein.
Length = 532
Score = 242 bits (593), Expect = 4e-64
Identities = 124/261 (47%), Positives = 168/261 (64%), Gaps = 4/261 (1%)
Frame = -3
Query: 860 ASPAQHDAGKPVPAD-HKD-VHLRFEERLNLIAGRDGDIQTFELSGLLTLRISNEQFGRI 687
A+ A A + +D HK+ VHL+ E++L + GRDG +Q FE SGLLTLRI++E +GRI
Sbjct: 274 AASASAAAKAAIASDIHKESVHLKIEDKLVVRLGRDGGVQQFENSGLLTLRITDEAYGRI 333
Query: 686 HVHVDNKDSRPLQLQTHPNVDKEAFRSTGVIGLKQAQRPFPMHSDVGVLKWRLATTNDDK 507
+ + ++ LQLQTHPNVDKE F+S IGLK +PFP+++DVGVLKWR + D+
Sbjct: 334 LLKLSPNHTQGLQLQTHPNVDKELFKSRTTIGLKNLGKPFPLNTDVGVLKWRF-VSQDES 392
Query: 506 LAPLSVNCWPSEGVNGGCDVNIEYELEQDHLVLTDVNITIPLPSGNTSVVVHQWEGSYTQ 327
PL++NCWPS+ GGCDVNIEYELE L L DV I IPLP N V +++G+Y
Sbjct: 393 AVPLTINCWPSDNGEGGCDVNIEYELEAQQLELQDVAIVIPLPM-NVQPSVAEYDGTYNY 451
Query: 326 KGRN--LIWSIPLVSKQQKTGSLEFTVTPSIPNDFFPLSVTWTSETSLALLTAVKVTQAE 153
R L W IP++ K+GS+EF+ + SIP DFFPL V++ S+T A + A V Q +
Sbjct: 452 DSRKHVLQWHIPIIDAANKSGSMEFSCSASIPGDFFPLQVSFVSKTPYAGVVAQDVVQVD 511
Query: 152 DGSPVDFSQEISFHADKYEFV 90
+ V +S E +KYE V
Sbjct: 512 SEAAVKYSSESILFVEKYEIV 532
>AY321364-1|AAP84718.1| 3241|Drosophila melanogaster PHD zinc finger
protein rhinoceros protein.
Length = 3241
Score = 33.9 bits (74), Expect = 0.30
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 133 KSTGDPSSACVTLTAVNNASEVSDVHVTESGKKSLGIDGVTVNSRLPV 276
K TG PS C+ + + +A + ESG+ ++G+ VN+ P+
Sbjct: 3135 KDTGTPSPPCLVIDSSKSADVHDSTSLPESGEAAMGVQSSLVNATTPL 3182
>AE014296-31|AAS64921.1| 3241|Drosophila melanogaster CG7036-PB,
isoform B protein.
Length = 3241
Score = 33.9 bits (74), Expect = 0.30
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 133 KSTGDPSSACVTLTAVNNASEVSDVHVTESGKKSLGIDGVTVNSRLPV 276
K TG PS C+ + + +A + ESG+ ++G+ VN+ P+
Sbjct: 3135 KDTGTPSPPCLVIDSSKSADVHDSTSLPESGEAAMGVQSSLVNATTPL 3182
>AE014296-30|AAF47343.1| 3201|Drosophila melanogaster CG7036-PA,
isoform A protein.
Length = 3201
Score = 33.9 bits (74), Expect = 0.30
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 133 KSTGDPSSACVTLTAVNNASEVSDVHVTESGKKSLGIDGVTVNSRLPV 276
K TG PS C+ + + +A + ESG+ ++G+ VN+ P+
Sbjct: 3095 KDTGTPSPPCLVIDSSKSADVHDSTSLPESGEAAMGVQSSLVNATTPL 3142
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,206,935
Number of Sequences: 53049
Number of extensions: 1050390
Number of successful extensions: 3349
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3338
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4362070239
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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