Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16e04r
(898 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21309-2|AAN73882.1| 515|Caenorhabditis elegans Hypothetical pr... 187 1e-47
Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical pr... 31 1.1
AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical... 31 1.1
U39678-2|AAL16315.1| 133|Caenorhabditis elegans Hypothetical pr... 31 1.5
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 31 1.5
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 31 1.5
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 31 1.5
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 31 1.5
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 31 1.5
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 31 1.5
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 31 1.5
U29244-3|AAC71088.1| 363|Caenorhabditis elegans Hypothetical pr... 30 2.6
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81525-5|CAB54242.1| 168|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z66519-3|CAA91372.1| 634|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z66519-2|CAA91381.1| 634|Caenorhabditis elegans Hypothetical pr... 29 6.0
>U21309-2|AAN73882.1| 515|Caenorhabditis elegans Hypothetical
protein C13B9.3 protein.
Length = 515
Score = 187 bits (455), Expect = 1e-47
Identities = 91/241 (37%), Positives = 155/241 (64%), Gaps = 2/241 (0%)
Frame = -3
Query: 806 VHLRFEERLNLIAGRDGDIQTFELSGLLTLRISNEQFGRIHVHVDNKDSRPLQLQTHPNV 627
VH+R EE++N RDG +++ E+ +TL I + +F I + ++N + QLQ HPN+
Sbjct: 279 VHVRTEEKINTRVSRDGGLESGEVQATVTLSIGSPEFIPISIKMNNGSAAGTQLQVHPNL 338
Query: 626 DKEAFRSTGVIGLKQAQRPFPMHSDVGVLKWRLATTNDDKLAPLSVNCWPSEGVNGGCDV 447
DK+ ++S+ + +K +P+P++SDVG+LKW++A + +++L P+S NCWP E + G V
Sbjct: 339 DKKEWQSSSTLKIKPNGKPYPVNSDVGILKWKMALSEEEQL-PISFNCWPQES-SDGVQV 396
Query: 446 NIEYELEQDHLVLTDVNITIPLPSGNTSVVVHQWEGSYT-QKGRN-LIWSIPLVSKQQKT 273
NIEY L+++ + L +V I +PLP+ T+ V + +G Y K +N ++WS+ ++ +
Sbjct: 397 NIEYTLQREDITLNNVRIIVPLPTA-TAPSVGECDGEYEYHKTKNVIVWSLAVIDSSNSS 455
Query: 272 GSLEFTVTPSIPNDFFPLSVTWTSETSLALLTAVKVTQAEDGSPVDFSQEISFHADKYEF 93
G+LEF+V + FFP+SV +TSE +T KV + DGSPV +S E +F+++ +E
Sbjct: 456 GTLEFSVPNGHCDHFFPVSVGFTSENLFVPITVQKVVK-NDGSPVTYSVETTFNSENFEI 514
Query: 92 V 90
V
Sbjct: 515 V 515
>Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -3
Query: 353 HQWEGSYTQKGRNLIWSIPLVSKQQKTGSLEFTVTPSIPNDFFPLS 216
H+ +G YT+K + ++ + KQ++ +E T+ ND F LS
Sbjct: 447 HRKDGQYTKKSKMILGQVQQRQKQEEDEQMESTMAQFTDNDPFNLS 492
>AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -3
Query: 353 HQWEGSYTQKGRNLIWSIPLVSKQQKTGSLEFTVTPSIPNDFFPLS 216
H+ +G YT+K + ++ + KQ++ +E T+ ND F LS
Sbjct: 447 HRKDGQYTKKSKMILGQVQQRQKQEEDEQMESTMAQFTDNDPFNLS 492
>U39678-2|AAL16315.1| 133|Caenorhabditis elegans Hypothetical
protein C39D10.8a protein.
Length = 133
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -3
Query: 470 GVNGGCDVNIEYELEQDHLVLTDVNITIPLPSGNTSVVVHQ-WEGSYTQKGRNLIWSIPL 294
G+ G N E+++E TD ITI SV+ H+ WEG Y Q R+ I +P
Sbjct: 67 GLGPGTTKNSEFKVEH-----TDNVITIRCKYRVQSVLAHETWEGEYIQYWRSEIGQMPK 121
Query: 293 VSKQQ 279
+ + +
Sbjct: 122 IIRDE 126
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Frame = -3
Query: 752 IQTFELSGLLTLRISN---EQFGRIHVHVDN---KDSRPLQLQTHPNVDKEAFRS 606
I T + + TL+ISN EQ G + V N +DS+ L+ PNV F+S
Sbjct: 2121 ITTIKTEDVYTLKISNPKIEQTGTVKVTAQNSAGQDSKQADLKVEPNVKAPKFKS 2175
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 287 CSRAECSR*GCVPSACSYPPTGAPPPK-CCQ 376
CS + CS +P AC PP PPPK CCQ
Sbjct: 56 CSSSCCSSQKPIPLACCPPP---PPPKPCCQ 83
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Frame = -3
Query: 752 IQTFELSGLLTLRISN---EQFGRIHVHVDN---KDSRPLQLQTHPNVDKEAFRS 606
I T + + TL+ISN EQ G + V N +DS+ L+ PNV F+S
Sbjct: 1481 ITTIKTEDVYTLKISNAKIEQTGTVKVTAQNSAGQDSKQADLKVEPNVKAPKFKS 1535
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Frame = -3
Query: 752 IQTFELSGLLTLRISN---EQFGRIHVHVDN---KDSRPLQLQTHPNVDKEAFRS 606
I T + + TL+ISN EQ G + V N +DS+ L+ PNV F+S
Sbjct: 2121 ITTIKTEDVYTLKISNAKIEQTGTVKVTAQNSAGQDSKQADLKVEPNVKAPKFKS 2175
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Frame = -3
Query: 752 IQTFELSGLLTLRISN---EQFGRIHVHVDN---KDSRPLQLQTHPNVDKEAFRS 606
I T + + TL+ISN EQ G + V N +DS+ L+ PNV F+S
Sbjct: 2121 ITTIKTEDVYTLKISNAKIEQTGTVKVTAQNSAGQDSKQADLKVEPNVKAPKFKS 2175
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Frame = -3
Query: 752 IQTFELSGLLTLRISN---EQFGRIHVHVDN---KDSRPLQLQTHPNVDKEAFRS 606
I T + + TL+ISN EQ G + V N +DS+ L+ PNV F+S
Sbjct: 1481 ITTIKTEDVYTLKISNAKIEQTGTVKVTAQNSAGQDSKQADLKVEPNVKAPKFKS 1535
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Frame = -3
Query: 752 IQTFELSGLLTLRISN---EQFGRIHVHVDN---KDSRPLQLQTHPNVDKEAFRS 606
I T + + TL+ISN EQ G + V N +DS+ L+ PNV F+S
Sbjct: 2121 ITTIKTEDVYTLKISNAKIEQTGTVKVTAQNSAGQDSKQADLKVEPNVKAPKFKS 2175
>U29244-3|AAC71088.1| 363|Caenorhabditis elegans Hypothetical
protein ZK1248.7 protein.
Length = 363
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +3
Query: 237 GYRRSDGELKTPGFLLFAHERNAPDEVASLLRVATLPLVHHHRSVA 374
G+ G KTP + + A + NAP L T L HHH+ VA
Sbjct: 284 GHTTLQGTAKTPLYTILADDCNAP---MDRLEELTYTLCHHHQIVA 326
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 611 GTLLCPRLDGSATVTVSSLCCRRARVCDRTARC*CVASANLIVQKFVC 754
GT C + + +++ SLC +A+ CD + R C A I +VC
Sbjct: 2055 GTTACSKKSTADCISLPSLCADKAK-CDNSTRS-CECDAGYIGDGYVC 2100
>Z81525-5|CAB54242.1| 168|Caenorhabditis elegans Hypothetical
protein F33A8.7 protein.
Length = 168
Score = 28.7 bits (61), Expect = 6.0
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Frame = +3
Query: 348 LVHHHRSVARRKRYGDIDICQHQVILLQLVFDIDVTSSVDAFGRPTVYGKRSQLVIVGSG 527
L+H HR+ ++ + DI ++I LQ + D +V + + + S+LV S
Sbjct: 45 LLHRHRTERQKIEKVNNDIRDARLIKLQQILDSPAPQNVTLIATQSDFSRISRLVHPVSN 104
Query: 528 QPPLEDSD-----VAVHREGALSLLQPNHAGR 608
+P + D + VHR A Q + A +
Sbjct: 105 KPVTDSVDELNKVLGVHRRQARKGAQSDAAAQ 136
>Z66519-3|CAA91372.1| 634|Caenorhabditis elegans Hypothetical
protein B0334.3b protein.
Length = 634
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 506 LAPLSVNCWPSEGVNGGCDVNIE 438
LA +VNCWP + G DV++E
Sbjct: 153 LANATVNCWPVVCIGGTADVDLE 175
>Z66519-2|CAA91381.1| 634|Caenorhabditis elegans Hypothetical
protein B0334.3a protein.
Length = 634
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 506 LAPLSVNCWPSEGVNGGCDVNIE 438
LA +VNCWP + G DV++E
Sbjct: 153 LANATVNCWPVVCIGGTADVDLE 175
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,410,142
Number of Sequences: 27780
Number of extensions: 499958
Number of successful extensions: 1731
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1727
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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