Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16e01r
         (910 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1289 - 36010924-36011001,36011441-36011518,36012321-360124...    34   0.14 
05_05_0110 + 22470869-22470920,22471044-22471146,22473261-224733...    33   0.31 
01_03_0184 + 13560830-13562981,13563604-13564088                       30   2.2  
11_01_0205 + 1617044-1617197,1617845-1618233                           28   8.9  
03_06_0648 + 35280492-35280645,35281742-35281820,35282491-352825...    28   8.9  

>01_06_1289 -
           36010924-36011001,36011441-36011518,36012321-36012421,
           36012506-36012603,36016213-36016315,36016435-36016486
          Length = 169

 Score = 34.3 bits (75), Expect = 0.14
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = -2

Query: 855 EWRESYSEFKRKVAQCVRKSQE 790
           EWRE   +FK+KV + VRKSQE
Sbjct: 146 EWREKRDDFKKKVRRLVRKSQE 167


>05_05_0110 +
           22470869-22470920,22471044-22471146,22473261-22473358,
           22473430-22473530,22474052-22474129,22474578-22474655
          Length = 169

 Score = 33.1 bits (72), Expect = 0.31
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = -2

Query: 855 EWRESYSEFKRKVAQCVRKSQE 790
           +WRE   +FK+KV + VRKSQE
Sbjct: 146 DWREKRDDFKKKVRRIVRKSQE 167


>01_03_0184 + 13560830-13562981,13563604-13564088
          Length = 878

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +3

Query: 543 FHHYNNC*LTCLKKDEKKTFNSILF 617
           F+H   C L C K D+ K F SILF
Sbjct: 393 FYHQITCVLICGKNDQAKQFGSILF 417


>11_01_0205 + 1617044-1617197,1617845-1618233
          Length = 180

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = -2

Query: 120 LYKINTYCYRDKYIYSE 70
           +YK++ Y Y+DK++Y E
Sbjct: 1   MYKVHFYIYKDKFVYKE 17


>03_06_0648 +
           35280492-35280645,35281742-35281820,35282491-35282593,
           35282695-35282815,35283144-35283232,35283324-35283473,
           35285842-35287161
          Length = 671

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = -1

Query: 901 PQLXCWLILFHFXQKXVERILFGV*KESSTVCEKEPRGLFLITVP 767
           P+  CWL+L       +++IL    K+ S   +K+P G    +VP
Sbjct: 254 PESYCWLVLTKLGDSMIKQILGRFPKKPSKSGDKDPIGRSSPSVP 298


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,045,337
Number of Sequences: 37544
Number of extensions: 395050
Number of successful extensions: 597
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)