Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16d24f
(743 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 33 0.057
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.23
SPBP23A10.11c |||conserved fungal protein|Schizosaccharomyces po... 30 0.40
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 29 0.53
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 29 0.53
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 27 2.1
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 2.1
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 2.8
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 27 3.7
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 3.7
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 3.7
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 26 4.9
SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr 2... 26 4.9
SPCC1672.03c |||guanine deaminase |Schizosaccharomyces pombe|chr... 26 4.9
SPBC16G5.15c |fkh2||fork head transcription factor Fkh2 |Schizos... 26 6.5
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 6.5
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 26 6.5
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 25 8.6
SPBP8B7.09c |||karyopherin|Schizosaccharomyces pombe|chr 2|||Manual 25 8.6
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 25 8.6
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 32.7 bits (71), Expect = 0.057
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = -2
Query: 664 TPPGPSRIQTGNPVGSATSLSSSVTDNVRAQAEANQVDSTPIAASVVDEPDQKVAKELSD 485
TP S + + S+T +SSS+T ++ + A ++ S+ ++ + D AK +S
Sbjct: 148 TPSSSSTTSSSSSSSSSTPISSSITSSISSSASSSVSSSSASSSGSISSAD---AKTVSA 204
Query: 484 TGNS-IDG-SVV*TVGKTTPVHNNNVAVGDGQQGGADHGVHSGVSVA 350
+ NS I G S T ++ N++ + G +GV + +SVA
Sbjct: 205 SSNSTISGFSTSTTSASSSAAGNSSSSSYTSYSGAVSNGV-AQLSVA 250
Score = 31.1 bits (67), Expect = 0.17
Identities = 16/80 (20%), Positives = 35/80 (43%)
Frame = -2
Query: 643 IQTGNPVGSATSLSSSVTDNVRAQAEANQVDSTPIAASVVDEPDQKVAKELSDTGNSIDG 464
I + S +S +++ + + + ++ STPI++S+ + +S + S G
Sbjct: 133 IYSSTSASSTSSSTATPSSSSTTSSSSSSSSSTPISSSITSSISSSASSSVSSSSASSSG 192
Query: 463 SVV*TVGKTTPVHNNNVAVG 404
S+ KT +N+ G
Sbjct: 193 SISSADAKTVSASSNSTISG 212
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 30.7 bits (66), Expect = 0.23
Identities = 32/110 (29%), Positives = 44/110 (40%), Gaps = 5/110 (4%)
Frame = -3
Query: 696 PALRFRAWLLPPHLGPAG---SKPV-TLLGLPPACRPALPTTCAPKLKPIKWTRPQLPPP 529
PA+ R+ P LG A + PV T LPP+ P+LP + P L P LPP
Sbjct: 393 PAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPS 452
Query: 528 LLMSQTKKLPRNCPTL-GTPLTAVLYRPLARPRQSTTITLQSETASKAGR 382
++ LP P P A P P + + +E + GR
Sbjct: 453 APIA--PPLPAGMPAAPPLPPAAPAPPPAPAPAPAAPVASIAELPQQDGR 500
Score = 29.1 bits (62), Expect = 0.70
Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 12/86 (13%)
Frame = -3
Query: 666 PPHLGPA-GSKPVTL-----LGLPPACRPALPTTCAPKLKPI----KWTRPQL--PPPLL 523
PP P+ G +P L + PPA PA+P AP L P+ + + P + PP L
Sbjct: 365 PPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLP 424
Query: 522 MSQTKKLPRNCPTLGTPLTAVLYRPL 445
S LP + P P+ A PL
Sbjct: 425 PSAPPSLPPSAPP-SLPMGAPAAPPL 449
>SPBP23A10.11c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 507
Score = 29.9 bits (64), Expect = 0.40
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = -2
Query: 685 VQGLVVTTPPGPSRIQTGNPVGSATSLSSSVTDNVRAQAEANQVDSTPIAASVVDEPD-Q 509
V G TTP + + + S SLSS+ TDN+ A V T +AASV D
Sbjct: 146 VYGDSATTPAASEAQASSDILSSLASLSSASTDNLAA-----SVTPTTVAASVASSVDTD 200
Query: 508 KVAKELSDTGNSIDGSV 458
+ +S +S SV
Sbjct: 201 SASATISSVVDSATSSV 217
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 29.5 bits (63), Expect = 0.53
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -3
Query: 618 LPPACRPALPTTCAPKLKPIKWTRPQLPPP 529
L P+ P LP + +L P+ TRPQ+P P
Sbjct: 1046 LSPSVTPQLPPVSS-RLPPVSATRPQIPQP 1074
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 29.5 bits (63), Expect = 0.53
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = -3
Query: 699 APALRFRAWLLPPHLGPAGSKPVTLLGLPPACR-PALPTTCAPKLKPIKWTRPQLP-PPL 526
APAL LPP P V L P+ P +P T AP L P + P +P PP+
Sbjct: 450 APALSMNPSSLPPWQQPTQQSAVQPSNLVPSQNAPFIPGTSAP-LPPTTFAPPGVPLPPI 508
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 27.5 bits (58), Expect = 2.1
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 2/113 (1%)
Frame = -2
Query: 619 SATSLSSSVTDNVRAQAEANQVDSTPIAASVVDEPDQKVAKELSDTGNSIDGSVV*TVGK 440
S TS+SSS ++N + +VDS P + V D K KE S+ G S T+
Sbjct: 368 STTSISSSPSENSDTSDDLTKVDS-PNKSLVNDNVSAKHDKE-SENGKSKFPPPSQTLVT 425
Query: 439 TTPVH--NNNVAVGDGQQGGADHGVHSGVSVAVPAVDNNKERQVSIVVRVPDR 287
T+ + N + G + +D S SV + + +++ S+ + +R
Sbjct: 426 TSTISAAGNEPSDEIGSENDSDSDSDSDSSVPLSQLQKKSQQRNSVSHEIQNR 478
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.5 bits (58), Expect = 2.1
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = -3
Query: 666 PPHLGPAGSKPVTLLGLPPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCP 487
PP P+G+ PV + PA + P KP P +PPP S+ +P+ P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGV-PPVPPP---SEAPPVPK--P 1203
Query: 486 TLGTP 472
++G P
Sbjct: 1204 SVGVP 1208
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.1 bits (57), Expect = 2.8
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = +3
Query: 408 TATLLLWTGVVLPTVYTTLPSMEFPVSDSSLATFWSGSSTTEAAIGVEST*LASAWARTL 587
+AT WT + T+ + + SS A+ WS SS + + +T +++ T
Sbjct: 922 SATSSSWTAETSSSAITSSVAASVTPTSSSSASSWSSSSEVDPSTAASATGSSTSSIATA 981
Query: 588 SVT 596
SV+
Sbjct: 982 SVS 984
Score = 25.4 bits (53), Expect = 8.6
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = -2
Query: 742 NTEKTTVGVDCLHISSCVTVQGLVVTTPPGPSRIQTGNPVGSATSLSSS--VTDNVRAQA 569
N E T+ + + VT T GPS + + S TSLS+S VT +V
Sbjct: 848 NLESTSSVTSTAYTTDSVT--STTALTSQGPSSSVVSSSLSSTTSLSTSIPVTSSVAPAV 905
Query: 568 EANQVDSTPIAASVVD 521
+ +++ + S D
Sbjct: 906 TSTGSETSSVVGSGTD 921
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 26.6 bits (56), Expect = 3.7
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -2
Query: 343 AVDNNKERQVSIVVRVPDRVDIAICNNLMVVLVTSG 236
A+ + E +++VVRV R D + +N + + TSG
Sbjct: 64 ALHDENETNINVVVRVRGRTDQEVRDNSSLAVSTSG 99
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 26.6 bits (56), Expect = 3.7
Identities = 44/173 (25%), Positives = 59/173 (34%), Gaps = 7/173 (4%)
Frame = +2
Query: 170 EEPAEEDILMSRNGANNQYWLFTRRNQNNHQVITNG--NVNSIRNSNYNGNLPLFVIV-- 337
E P E L GA + N N TN N N+ N+N N
Sbjct: 40 EPPVENLKLAPPPGATSVNTAVYNNNNNTSAANTNAAYNANTAANANANTATTTNAAATT 99
Query: 338 -HGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLV 514
+N N + N P A + N D +GL +GL T+ NG + + V
Sbjct: 100 SAAYNPNAPANTNAAYYPNAAATTTTNADGSD-KGLFSGL--TSSNGYTTGNSYSRPSYV 156
Query: 515 WLINNGGGNWGRVHLIGFSLG--AHVVGNAGRQAGGRPNRVTGLDPAGPRWGG 667
+ G G L +LG H G+ G GG G P +GG
Sbjct: 157 APVAAGLGGLALGGLASHALGNLFHHRGHNGGGFGGFGGGSGGPPPGPGGFGG 209
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.6 bits (56), Expect = 3.7
Identities = 15/46 (32%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = -3
Query: 666 PPHLGPAGSK-PVTLLGLPPACRPALPTTCAPKLKPIKWTRPQLPP 532
P P SK P LPP +PA P P + P +PP
Sbjct: 154 PASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPP 199
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 26.2 bits (55), Expect = 4.9
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +3
Query: 438 VLPTVYTTLPSMEFPVSDSSLATFWSGSSTTEAAIGVEST 557
VLPT T S VS SSL++F ST G +T
Sbjct: 244 VLPTSIITSTSTPVTVSSSSLSSFTPSYSTNLTTTGSTTT 283
>SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 426
Score = 26.2 bits (55), Expect = 4.9
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 131 SKRIGLHLPHSDCCLQGSW 75
S + LPHSD L GSW
Sbjct: 290 SNSVSAKLPHSDSVLTGSW 308
>SPCC1672.03c |||guanine deaminase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 527
Score = 26.2 bits (55), Expect = 4.9
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +2
Query: 227 WLFTRRNQNNHQVITNGNVNS--IRNSNYNGNLPLFVIVHGWNSNGNSAVNTMIRPALLA 400
W+FT ++N QV NG + S +N + PL +G S+G+ + + LL
Sbjct: 425 WVFTSDDRNLAQVWVNGRLVSGFEMKANLKNSTPL---TNGVTSSGHQVFKELTQAHLLP 481
Query: 401 VSDC 412
+ C
Sbjct: 482 RTQC 485
>SPBC16G5.15c |fkh2||fork head transcription factor Fkh2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 25.8 bits (54), Expect = 6.5
Identities = 18/60 (30%), Positives = 24/60 (40%)
Frame = -3
Query: 642 SKPVTLLGLPPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPLTA 463
S PV LL P+LP PK+K + P S + P +G+P TA
Sbjct: 321 SSPVPLLAKKREGSPSLPIPILPKMKDTSIPAAE-PASSTTSARDQTPSTPKDVGSPSTA 379
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.8 bits (54), Expect = 6.5
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -3
Query: 651 PAGSKPVTLLGLPPACRPALPTTCAPKLK-PIKWTRPQLPPP 529
P S P +++ PP+ +P P+ AP P + P PPP
Sbjct: 156 PTVSAPNSMVSPPPSFQP--PSAAAPATSLPSDYNPPPPPPP 195
Score = 25.8 bits (54), Expect = 6.5
Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 6/78 (7%)
Frame = -3
Query: 609 ACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQ---TKKLP---RNCPTLGTPLTAVLYRP 448
A P +P T PK P PPP L Q T +LP RN LG+ + + P
Sbjct: 218 AVSPEIPPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVN--IPPP 275
Query: 447 LARPRQSTTITLQSETAS 394
A P Q + T S
Sbjct: 276 PATPSQPPRPPTNASTRS 293
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 25.8 bits (54), Expect = 6.5
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 95 SHYVEGVSRYVWMPDGEGVPHLVDLEEPAEEDILMSR 205
S Y +G+S V + G+GV H+V + E + L+ R
Sbjct: 141 SLYAQGLSSGVVVDSGDGVTHIVPVYESVVLNHLVGR 177
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 25.4 bits (53), Expect = 8.6
Identities = 14/52 (26%), Positives = 21/52 (40%)
Frame = -3
Query: 627 LLGLPPACRPALPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTP 472
+ G P PA + ++P ++ LPPP K LP +L P
Sbjct: 21 IFGAPRKREPARTVSTPAFMEPAPVSKKPLPPPTRRLPRKPLPFRSTSLQPP 72
>SPBP8B7.09c |||karyopherin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 978
Score = 25.4 bits (53), Expect = 8.6
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 284 NSIRNSNYNGNLPLFVIVHGWNSNGN 361
+SIRNS++N L LF V S+GN
Sbjct: 604 SSIRNSDFNSQLYLFETVGVLISSGN 629
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 25.4 bits (53), Expect = 8.6
Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
Frame = -3
Query: 618 LPPACRPALPTTCAPKLKPIKWTRPQLPP----PLLMSQTKKLPRNCPTLGTPLTAVLYR 451
LPP PA P + P +PP PL+ + T P + P + P TA +
Sbjct: 210 LPPGFSPATPAPTSAANTPATIAATSIPPVPNVPLVGATTAVPPLSIPNV-LPFTAAQHF 268
Query: 450 P 448
P
Sbjct: 269 P 269
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,418,713
Number of Sequences: 5004
Number of extensions: 76365
Number of successful extensions: 304
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 302
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 353266144
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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