Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16d23r
(863 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 54 1e-07
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 52 7e-07
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 44 1e-04
Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical pr... 38 0.012
AL023842-4|CAA19517.2| 229|Caenorhabditis elegans Hypothetical ... 31 0.80
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 3.2
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 3.2
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 29 4.3
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 28 9.9
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 28 9.9
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 54.0 bits (124), Expect = 1e-07
Identities = 64/258 (24%), Positives = 110/258 (42%), Gaps = 17/258 (6%)
Frame = -2
Query: 727 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFTL 548
RI+GG++ + GA+ +A LV NG+ +CGA+++ + VTAAHC Q R F
Sbjct: 37 RIIGGNSIDDGAN-WMAKLVSYGDNGQGILCGATVIDDFWLVTAAHC--ALQLQTRSFVY 93
Query: 547 AFGTANIFSGGTRVTTSSVHLHGSYNMNNLNNDVAIINHNHVGFNNNIQRINLA---SXX 377
N + + ++H YN +ND+A++ + I+ + L S
Sbjct: 94 VREPKN--NRERSFSVKEAYIHSGYNNQTADNDIALLRISSDLSKLGIKPVCLVHDDSKL 151
Query: 376 XXXXXXXXXXXXXGRTSDAASG----ANNQQKRQVSLQVITNAVCARTYG-----NSVII 224
+ +SG N+Q + S+ +I++ C +T+ + I
Sbjct: 152 LKQYKNGVVIGYGLTLGEDSSGEPKLINSQTLQSTSVPIISDDDCVKTWRFLSLLSVKIT 211
Query: 223 GSTLCVSGANGRSTCXXXXXXXXXXXXXXGRQL-IGITSFGSD--RGC--QRGYPAGFAR 59
G +C +GA T G + IGITS+G+D G Q +P + R
Sbjct: 212 GYQIC-AGAYLHGTAPGDSGGPLLIHKSNGEYVQIGITSYGADGLDGVIDQGKFPGVYTR 270
Query: 58 VTSFNSWIRARI*MTT*R 5
++ + WI+ I T+ R
Sbjct: 271 ISKYVPWIQGVIGKTSMR 288
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 51.6 bits (118), Expect = 7e-07
Identities = 60/251 (23%), Positives = 107/251 (42%), Gaps = 8/251 (3%)
Frame = -2
Query: 763 RRAEEAADFDGT--RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAH 590
R A+E AD+ R++GGS ++ + P L+ L + R CG SL+ +TAAH
Sbjct: 43 RSAQEPADYVTLDHRLIGGSESSPHSWPWTVQLLSRLGHHR---CGGSLIDPNFVLTAAH 99
Query: 589 CWRTRNAQARQFTLAFGTANIFSGGTRVTTSSVHLHGSYNMNNLNN-DVAIIN-HNHVGF 416
C+ ++ + +++ G SG T +V +H YN+ ++ D AI+ H V
Sbjct: 100 CF-AKDRRPTSYSVRVGGHRSGSGSPHRVT-AVSIHPWYNIGFPSSYDFAIMRIHPPVNT 157
Query: 415 NNNIQRINLASXXXXXXXXXXXXXXXGRTSDAASGANNQQKRQVSLQVITNAVCAR--TY 242
+ + I L S ++ S + R++ + +++ C+ Y
Sbjct: 158 STTARPICLPSLPAVENRLCVVTGWG--STIEGSSLSAPTLREIHVPLLSTLFCSSLPNY 215
Query: 241 GNSVIIGSTLCVSGANGR-STCXXXXXXXXXXXXXXGRQLIGITSFGSDRGCQR-GYPAG 68
+ + S LC + G+ +C +L G+ S+G GC R G P
Sbjct: 216 IGRIHLPSMLCAGYSYGKIDSCQGDSGGPLMCARDGHWELTGVVSWGI--GCARPGMPGV 273
Query: 67 FARVTSFNSWI 35
+ V S ++WI
Sbjct: 274 YGNVHSASTWI 284
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 44.4 bits (100), Expect = 1e-04
Identities = 41/137 (29%), Positives = 59/137 (43%), Gaps = 5/137 (3%)
Frame = -2
Query: 778 GLRVFR-RAEEAADFDGTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSV 602
GLR A +AA R+VGG GA P A L T CGAS+L T +
Sbjct: 8 GLRYVEVNARDAAKSRIARVVGGFETVPGAFPWTAALRNKATKAHH--CGASILDKTHLI 65
Query: 601 TAAHCW-RTRNAQARQFTLAFGTANIFSGGTRV-TTSSVHLHGSYNMNNLNNDVAIINHN 428
TAAHC+ + + + N G ++ +H + Y + ++D+AI+
Sbjct: 66 TAAHCFEEDERVSSYEVVVGDWDNNQTDGNEQIFYLQRIHFYPLYK-DIFSHDIAILEIP 124
Query: 427 HVG--FNNNIQRINLAS 383
+ G FN Q I L S
Sbjct: 125 YPGIEFNEYAQPICLPS 141
>Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical
protein F15B9.5 protein.
Length = 297
Score = 37.5 bits (83), Expect = 0.012
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = -2
Query: 730 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 587
T I+ G +AN+ LA ++ +G T++CG L+ + +T+AHC
Sbjct: 15 TSIINGFSANSFDTLSLASVITRFPDGTTNVCGGVLIAPSIVITSAHC 62
>AL023842-4|CAA19517.2| 229|Caenorhabditis elegans Hypothetical
protein Y44A6D.3 protein.
Length = 229
Score = 31.5 bits (68), Expect = 0.80
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -2
Query: 523 SGGTRVTTSSVHLHGSYNMNNLNNDVAIINHNHVGFNNNIQ 401
+ R+ S H G +NN+NN+ NHNH NNNIQ
Sbjct: 68 AAAARLNAQSSHSSGPARLNNMNNN-NNNNHNH-SKNNNIQ 106
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.5 bits (63), Expect = 3.2
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Frame = +3
Query: 618 VSKEAPQMEVLPFVSAITSPAR--WG*AP-ALAAEPPTILVPSKSAASSARLKTLSPGDT 788
+SK E +PF+ + A G AP A AA PP ++VP+ S+ SS K SP +
Sbjct: 1 MSKTGGNTEPMPFIRKWGNEAGEDLGAAPSATAAPPPALVVPTISSMSSGDNK--SPSRS 58
Query: 789 DLVVVVKFDGLFCHDHGRQR 848
+ V K D D R++
Sbjct: 59 ESVSDRKRDRSRSRDRDRKK 78
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.5 bits (63), Expect = 3.2
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Frame = +3
Query: 618 VSKEAPQMEVLPFVSAITSPAR--WG*AP-ALAAEPPTILVPSKSAASSARLKTLSPGDT 788
+SK E +PF+ + A G AP A AA PP ++VP+ S+ SS K SP +
Sbjct: 1 MSKTGGNTEPMPFIRKWGNEAGEDLGAAPSATAAPPPALVVPTISSMSSGDNK--SPSRS 58
Query: 789 DLVVVVKFDGLFCHDHGRQR 848
+ V K D D R++
Sbjct: 59 ESVSDRKRDRSRSRDRDRKK 78
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Frame = -2
Query: 712 SAANAGAHPHLAGLVIAL-TNGRTS----ICGASLLTNTRSVTAAHCWR 581
+A N G HLA + + R ICG +L+T +TAAHC++
Sbjct: 32 AAGNTGNPTHLAPWAVQIRVKARKGDFEVICGGTLITLKHVLTAAHCFQ 80
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 500 GGDPGAAGEDVSCTKSEGELTSLGVPGSP 586
GG PG AG+ S G+ G PGSP
Sbjct: 192 GGRPGQAGQTRSAPSPPGQPGQPGEPGSP 220
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 500 GGDPGAAGEDVSCTKSEGELTSLGVPGSP 586
GG PG AG+ S G+ G PGSP
Sbjct: 192 GGRPGQAGQTRSAPSPPGQPGQPGEPGSP 220
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,221,957
Number of Sequences: 27780
Number of extensions: 270410
Number of successful extensions: 985
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 984
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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