Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16d18r
(729 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK022360-1|BAB14021.1| 561|Homo sapiens protein ( Homo sapiens ... 33 1.4
BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein. 32 2.4
BX640701-1|CAE45821.1| 477|Homo sapiens hypothetical protein pr... 30 7.4
BC090041-1|AAH90041.1| 477|Homo sapiens ZWILCH protein protein. 30 7.4
BC036900-1|AAH36900.1| 477|Homo sapiens ZWILCH protein protein. 30 7.4
AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens ... 30 7.4
AK027468-1|BAB55133.1| 236|Homo sapiens protein ( Homo sapiens ... 30 7.4
AK023175-1|BAB14446.1| 591|Homo sapiens protein ( Homo sapiens ... 30 7.4
>AK022360-1|BAB14021.1| 561|Homo sapiens protein ( Homo sapiens
cDNA FLJ12298 fis, clone MAMMA1001837, weakly similar to
ZINC FINGER PROTEIN 29. ).
Length = 561
Score = 32.7 bits (71), Expect = 1.4
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = -1
Query: 402 CSL*SAGETSTISLAPWWMVASSRQTVPTRKDGSSLS*PTSRDTTSGTEPRSDSSS 235
CSL + S L PW M A S+ P+++DG L D+ EP ++S
Sbjct: 3 CSLTAQRRGSDAELGPWVMAARSKDAAPSQRDG-LLPVKVEEDSPGSWEPNYPAAS 57
>BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein.
Length = 257
Score = 31.9 bits (69), Expect = 2.4
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 2/108 (1%)
Frame = -1
Query: 387 AGETSTISLAPWWMVASSRQTVPTRKDGSSLS*PTSRDTTSGTEPRSDSS--STNGSFRQ 214
+ +ST S + +SS + SS S P+S ++S + P S SS S++ S
Sbjct: 84 SSSSSTSSPSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSS 143
Query: 213 TPPSNALLSDXXXXXXXXXXXXXXTQLKSSIG*RTPSRSIDXVSSSAN 70
+ PS++ S + S +PS S SSS++
Sbjct: 144 SSPSSSSSSPSSSSSSSSSSSSSPSSSSPSSSGSSPSSSNSSPSSSSS 191
Score = 30.3 bits (65), Expect = 7.4
Identities = 24/91 (26%), Positives = 39/91 (42%)
Frame = -1
Query: 342 ASSRQTVPTRKDGSSLS*PTSRDTTSGTEPRSDSSSTNGSFRQTPPSNALLSDXXXXXXX 163
+SS + P+ SS S P+S ++S S SSS++ S + PS++ S
Sbjct: 110 SSSSSSSPSSSSSSSSSSPSS--SSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSP 167
Query: 162 XXXXXXXTQLKSSIG*RTPSRSIDXVSSSAN 70
+ S +PS S SSS++
Sbjct: 168 SSSSPSSSGSSPSSSNSSPSSSSSSPSSSSS 198
>BX640701-1|CAE45821.1| 477|Homo sapiens hypothetical protein
protein.
Length = 477
Score = 30.3 bits (65), Expect = 7.4
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +2
Query: 233 VDEESERGSVPEVVSLEVGQDKLEPSFLVGTVWREEATIHH 355
+D S G++P + LE+G DKL+ ++ + +E A+++H
Sbjct: 292 MDTVSLSGTIPVQMLLEIGLDKLKKDYISFFIGQELASLNH 332
>BC090041-1|AAH90041.1| 477|Homo sapiens ZWILCH protein protein.
Length = 477
Score = 30.3 bits (65), Expect = 7.4
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +2
Query: 233 VDEESERGSVPEVVSLEVGQDKLEPSFLVGTVWREEATIHH 355
+D S G++P + LE+G DKL+ ++ + +E A+++H
Sbjct: 292 MDTVSLSGTIPVQMLLEIGLDKLKKDYISFFIGQELASLNH 332
>BC036900-1|AAH36900.1| 477|Homo sapiens ZWILCH protein protein.
Length = 477
Score = 30.3 bits (65), Expect = 7.4
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +2
Query: 233 VDEESERGSVPEVVSLEVGQDKLEPSFLVGTVWREEATIHH 355
+D S G++P + LE+G DKL+ ++ + +E A+++H
Sbjct: 292 MDTVSLSGTIPVQMLLEIGLDKLKKDYISFFIGQELASLNH 332
>AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens
cDNA FLJ35107 fis, clone PLACE6006871, moderately
similar to SUPPRESSOR PROTEIN SRP40. ).
Length = 258
Score = 30.3 bits (65), Expect = 7.4
Identities = 24/91 (26%), Positives = 39/91 (42%)
Frame = -1
Query: 342 ASSRQTVPTRKDGSSLS*PTSRDTTSGTEPRSDSSSTNGSFRQTPPSNALLSDXXXXXXX 163
+SS + P+ SS S P+S ++S S SSS++ S + PS++ S
Sbjct: 111 SSSSSSSPSSSSSSSSSSPSS--SSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSP 168
Query: 162 XXXXXXXTQLKSSIG*RTPSRSIDXVSSSAN 70
+ S +PS S SSS++
Sbjct: 169 SSSSPSSSGSSPSSSNSSPSSSSSSPSSSSS 199
>AK027468-1|BAB55133.1| 236|Homo sapiens protein ( Homo sapiens
cDNA FLJ14562 fis, clone NT2RM4000027. ).
Length = 236
Score = 30.3 bits (65), Expect = 7.4
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +2
Query: 233 VDEESERGSVPEVVSLEVGQDKLEPSFLVGTVWREEATIHH 355
+D S G++P + LE+G DKL+ ++ + +E A+++H
Sbjct: 51 MDTVSLSGTIPVQMLLEIGLDKLKKDYISFFIGQELASLNH 91
>AK023175-1|BAB14446.1| 591|Homo sapiens protein ( Homo sapiens
cDNA FLJ13113 fis, clone NT2RP3002590. ).
Length = 591
Score = 30.3 bits (65), Expect = 7.4
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +2
Query: 233 VDEESERGSVPEVVSLEVGQDKLEPSFLVGTVWREEATIHH 355
+D S G++P + LE+G DKL+ ++ + +E A+++H
Sbjct: 406 MDTVSLSGTIPVQMLLEIGLDKLKKDYISFFIGQELASLNH 446
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,095,834
Number of Sequences: 237096
Number of extensions: 2616837
Number of successful extensions: 6149
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6116
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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