Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16d15r
         (789 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    24   1.4  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   9.9  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   9.9  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   9.9  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              21   9.9  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    21   9.9  

>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 162 YNYLQLIYFTIALRKFTYICN*KKCYDHIISN 257
           +N L +IY    L+ F    + K+ YD ++SN
Sbjct: 13  FNTLHIIYSVAGLKIFEANPDTKRLYDDLLSN 44


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 455 WMILFILFYCYFIRTGYC 508
           ++I ++ F+C  I T YC
Sbjct: 281 FLICWVPFFCVNIVTSYC 298


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 396 ICYSNFKVPMFSLDRLL 446
           I Y N K+  F++D+L+
Sbjct: 444 IIYPNLKIESFTVDKLI 460


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 396 ICYSNFKVPMFSLDRLL 446
           I Y N K+  F++D+L+
Sbjct: 444 IIYPNLKIESFTVDKLI 460


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = -3

Query: 154 ENYDCNSNHL*DSHLPIYYC 95
           E Y C  ++L + H+ +++C
Sbjct: 90  ECYCCRESYLKERHITLHHC 109


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = -3

Query: 154 ENYDCNSNHL*DSHLPIYYC 95
           E Y C  ++L + H+ +++C
Sbjct: 90  ECYCCRESYLKERHITLHHC 109


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,633
Number of Sequences: 438
Number of extensions: 4512
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)