Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16d15f
         (760 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99281-45|CAC70123.2|  222|Caenorhabditis elegans Hypothetical p...   115   3e-26
U50193-10|AAP68919.1| 1098|Caenorhabditis elegans Hypothetical p...    36   0.041
U50193-9|AAA91253.2| 1332|Caenorhabditis elegans Hypothetical pr...    36   0.041
Z66500-5|CAA91306.1|  168|Caenorhabditis elegans Hypothetical pr...    30   2.1  
AF016425-1|AAD34668.1|  458|Caenorhabditis elegans Hypothetical ...    30   2.1  
AC006685-1|AAK84571.1|  154|Caenorhabditis elegans Hypothetical ...    29   2.7  
Z79755-7|CAB02103.1|  466|Caenorhabditis elegans Hypothetical pr...    29   4.7  
U64599-2|ABB88205.1|  420|Caenorhabditis elegans Unidentified vi...    29   4.7  
U64599-1|AAB04560.3|  426|Caenorhabditis elegans Unidentified vi...    29   4.7  
Z93785-2|CAB07859.2| 1335|Caenorhabditis elegans Hypothetical pr...    28   6.3  

>Z99281-45|CAC70123.2|  222|Caenorhabditis elegans Hypothetical
           protein Y57G11C.34 protein.
          Length = 222

 Score =  115 bits (277), Expect = 3e-26
 Identities = 68/190 (35%), Positives = 104/190 (54%), Gaps = 2/190 (1%)
 Frame = +2

Query: 197 PDYYQNPIFRKEDQVKLIADSDLKNRATVPVKPPTVSETSSVYFDPLVNKVINHVMEKGN 376
           P  +++P+   ++  K +   D +N   + +K      T   Y D +++K+I    + G 
Sbjct: 26  PRVFRDPVTNVQELRKPLDSDDERN--FLFLKAMKSDATPVFYRDHVIDKLIRVCTKDGE 83

Query: 377 KRLARQLVEKAFENIKRKQIERYHLASTPEEKAKIELNPKDILYKAVENCKPLLQLQPIK 556
           K  +R+ V  A E IKR+Q + +  AS  EEK  IEL+P  +  K ++NC PL++LQ + 
Sbjct: 84  KETSRKNVLSALEIIKRRQYKAWAKASE-EEKKSIELDPFLVAKKGIKNCHPLMKLQGVT 142

Query: 557 RGGITYQVPGPITEKRSLFLAIKWLLE--TTDEKERTVHFPEQFAWELLEASNNTGKVVK 730
           RGG TYQVP PI E  + F A+K + +      K    HF +  A ELL AS N G  ++
Sbjct: 143 RGGTTYQVPFPIEEPEAEFRAMKMMRDICRVRSKHGETHFKDILATELLAASQNEGSTIQ 202

Query: 731 RKQDLHRQCE 760
            KQ+LH+ CE
Sbjct: 203 AKQELHKTCE 212


>U50193-10|AAP68919.1| 1098|Caenorhabditis elegans Hypothetical
           protein ZK328.7b protein.
          Length = 1098

 Score = 35.5 bits (78), Expect = 0.041
 Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
 Frame = +2

Query: 383 LARQLVEKAFENIKRK-----QIERYHLASTPEEKAKIELNPKDILYKAVENCKPLLQLQ 547
           LA+Q  +K+FEN ++      ++ R  L S P     + L   D+LY AVE C     L 
Sbjct: 424 LAKQSKDKSFENFRQHIENLVEMLRNQLQSFPFGLDYLSLFSSDLLYSAVEQCFDFYPLV 483

Query: 548 PIK 556
           PIK
Sbjct: 484 PIK 486


>U50193-9|AAA91253.2| 1332|Caenorhabditis elegans Hypothetical
           protein ZK328.7a protein.
          Length = 1332

 Score = 35.5 bits (78), Expect = 0.041
 Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
 Frame = +2

Query: 383 LARQLVEKAFENIKRK-----QIERYHLASTPEEKAKIELNPKDILYKAVENCKPLLQLQ 547
           LA+Q  +K+FEN ++      ++ R  L S P     + L   D+LY AVE C     L 
Sbjct: 424 LAKQSKDKSFENFRQHIENLVEMLRNQLQSFPFGLDYLSLFSSDLLYSAVEQCFDFYPLV 483

Query: 548 PIK 556
           PIK
Sbjct: 484 PIK 486


>Z66500-5|CAA91306.1|  168|Caenorhabditis elegans Hypothetical
           protein T05C12.5 protein.
          Length = 168

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 18/61 (29%), Positives = 32/61 (52%)
 Frame = +2

Query: 248 IADSDLKNRATVPVKPPTVSETSSVYFDPLVNKVINHVMEKGNKRLARQLVEKAFENIKR 427
           I+D++     T+ V P   ++TS+       + V    +E  N +L RQL+EK  + +K+
Sbjct: 3   ISDTERHQHYTISVCPVLQTDTSTT------SSVAKRQIESKNAQLLRQLIEKKNKKLKK 56

Query: 428 K 430
           K
Sbjct: 57  K 57


>AF016425-1|AAD34668.1|  458|Caenorhabditis elegans Hypothetical
           protein F59A7.1 protein.
          Length = 458

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = -2

Query: 621 IAKNNDLFSVIGPGTWYVIPPLLMGCNCNNGLQFSTALYKMSLGFN 484
           I K ND +S+I    W V P    G    NG   S   Y M L ++
Sbjct: 399 ITKTNDKYSIID---WQVYPASFNGILTGNGFTLSPVTYSMELQYD 441


>AC006685-1|AAK84571.1|  154|Caenorhabditis elegans Hypothetical
           protein T13G4.2 protein.
          Length = 154

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
 Frame = +3

Query: 402 RKHSKISKGNKLNDTIWLLHQKKKPK*S*ILRTFYIKPLKIANHCYNYSPSRGV----VS 569
           R+  ++ +G KL     LL  +K+     I R  Y +PL   +HC+  +PS  +     S
Sbjct: 33  RRREELGEGEKL-----LLQPQKRG----IERGVYYRPLNFTDHCFKMTPSANIGTMPCS 83

Query: 570 HTRCL 584
           H+ C+
Sbjct: 84  HSMCV 88


>Z79755-7|CAB02103.1|  466|Caenorhabditis elegans Hypothetical
           protein F43G9.10 protein.
          Length = 466

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 1/97 (1%)
 Frame = +2

Query: 224 RKEDQVKLIADSDLKNRATVPVKPPTVSETSSVYFDPLVNKVINHVME-KGNKRLARQLV 400
           RK +  KL+     +  A    K     + SSV  D     +     + +  KRL R   
Sbjct: 261 RKRESAKLVEKVLQEEEAAEKRKTEDRVDLSSVLTDDETENMAYEAWKLREMKRLKRNRD 320

Query: 401 EKAFENIKRKQIERYHLASTPEEKAKIELNPKDILYK 511
           E+     ++ ++++ H  S  E    + LNPK I  K
Sbjct: 321 EREEAAREKAELDKIHAMSEEERLKYLRLNPKVITNK 357


>U64599-2|ABB88205.1|  420|Caenorhabditis elegans Unidentified
           vitellogenin-linkedtranscript protein 6, isoform b
           protein.
          Length = 420

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 16/60 (26%), Positives = 28/60 (46%)
 Frame = -1

Query: 343 INERIKVNGRRFRNRRWLHRYSCSVLQIRICNEFHLIFFSKYWILIIVWKACRLRIISNL 164
           + E  K + R  RN+R    Y      ++    FHL+ +S +W+  +     R+RI + L
Sbjct: 210 LREAAKGSRRLHRNKRSRSSYQRVTRSVQRVVLFHLLCWSPFWLFNLFSAIFRVRITTQL 269


>U64599-1|AAB04560.3|  426|Caenorhabditis elegans Unidentified
           vitellogenin-linkedtranscript protein 6, isoform a
           protein.
          Length = 426

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 16/60 (26%), Positives = 28/60 (46%)
 Frame = -1

Query: 343 INERIKVNGRRFRNRRWLHRYSCSVLQIRICNEFHLIFFSKYWILIIVWKACRLRIISNL 164
           + E  K + R  RN+R    Y      ++    FHL+ +S +W+  +     R+RI + L
Sbjct: 210 LREAAKGSRRLHRNKRSRSSYQRVTRSVQRVVLFHLLCWSPFWLFNLFSAIFRVRITTQL 269


>Z93785-2|CAB07859.2| 1335|Caenorhabditis elegans Hypothetical protein
            W09D10.2 protein.
          Length = 1335

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -1

Query: 271  VLQIRICNEFHLIFFSKYWILIIVW 197
            V Q+ I N FHL  F +YW   + W
Sbjct: 1182 VTQLIIVNTFHLALFVQYWTWPMFW 1206


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,596,424
Number of Sequences: 27780
Number of extensions: 351767
Number of successful extensions: 1188
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1187
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)