BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16d09r
(925 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X59350-1|CAA42006.1| 847|Homo sapiens B Cell membrane protein C... 32 2.6
U62631-1|AAB06448.1| 847|Homo sapiens B-cell receptor CD22-B is... 32 2.6
EF064756-1|ABK41939.1| 847|Homo sapiens CD22 molecule protein. 32 2.6
BC109306-1|AAI09307.1| 675|Homo sapiens CD22 protein protein. 32 2.6
AB253795-1|BAF32758.1| 847|Homo sapiens CD22 antigen protein. 32 2.6
AB253794-1|BAF32757.1| 847|Homo sapiens CD22 antigen protein. 32 2.6
AB253793-1|BAF32756.1| 847|Homo sapiens CD22 antigen protein. 32 2.6
AB013000-1|BAA36569.1| 88|Homo sapiens CD22 protein. 32 2.6
S61375-1|AAC18956.1| 662|Homo sapiens CD22 protein protein. 32 3.4
>X59350-1|CAA42006.1| 847|Homo sapiens B Cell membrane protein CD22
protein.
Length = 847
Score = 32.3 bits (70), Expect = 2.6
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +2
Query: 215 TLTVKIQSKNPSAFTLSVPHEGTSL*KYAARFTLGLTYITRNTS 346
T+T ++ S NP T+S +GTSL K FTL L +T++ S
Sbjct: 262 TMTCEVSSSNPEYTTVSWLKDGTSL-KKQNTFTLNLREVTKDQS 304
>U62631-1|AAB06448.1| 847|Homo sapiens B-cell receptor CD22-B
isoform protein.
Length = 847
Score = 32.3 bits (70), Expect = 2.6
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +2
Query: 215 TLTVKIQSKNPSAFTLSVPHEGTSL*KYAARFTLGLTYITRNTS 346
T+T ++ S NP T+S +GTSL K FTL L +T++ S
Sbjct: 262 TMTCEVSSSNPEYTTVSWLKDGTSL-KKQNTFTLNLREVTKDQS 304
>EF064756-1|ABK41939.1| 847|Homo sapiens CD22 molecule protein.
Length = 847
Score = 32.3 bits (70), Expect = 2.6
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +2
Query: 215 TLTVKIQSKNPSAFTLSVPHEGTSL*KYAARFTLGLTYITRNTS 346
T+T ++ S NP T+S +GTSL K FTL L +T++ S
Sbjct: 262 TMTCEVSSSNPEYTTVSWLKDGTSL-KKQNTFTLNLREVTKDQS 304
>BC109306-1|AAI09307.1| 675|Homo sapiens CD22 protein protein.
Length = 675
Score = 32.3 bits (70), Expect = 2.6
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +2
Query: 215 TLTVKIQSKNPSAFTLSVPHEGTSL*KYAARFTLGLTYITRNTS 346
T+T ++ S NP T+S +GTSL K FTL L +T++ S
Sbjct: 90 TMTCEVSSSNPEYTTVSWLKDGTSL-KKQNTFTLNLREVTKDQS 132
>AB253795-1|BAF32758.1| 847|Homo sapiens CD22 antigen protein.
Length = 847
Score = 32.3 bits (70), Expect = 2.6
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +2
Query: 215 TLTVKIQSKNPSAFTLSVPHEGTSL*KYAARFTLGLTYITRNTS 346
T+T ++ S NP T+S +GTSL K FTL L +T++ S
Sbjct: 262 TMTCEVSSSNPEYTTVSWLKDGTSL-KKQNTFTLNLREVTKDQS 304
>AB253794-1|BAF32757.1| 847|Homo sapiens CD22 antigen protein.
Length = 847
Score = 32.3 bits (70), Expect = 2.6
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +2
Query: 215 TLTVKIQSKNPSAFTLSVPHEGTSL*KYAARFTLGLTYITRNTS 346
T+T ++ S NP T+S +GTSL K FTL L +T++ S
Sbjct: 262 TMTCEVSSSNPEYTTVSWLKDGTSL-KKQNTFTLNLREVTKDQS 304
>AB253793-1|BAF32756.1| 847|Homo sapiens CD22 antigen protein.
Length = 847
Score = 32.3 bits (70), Expect = 2.6
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +2
Query: 215 TLTVKIQSKNPSAFTLSVPHEGTSL*KYAARFTLGLTYITRNTS 346
T+T ++ S NP T+S +GTSL K FTL L +T++ S
Sbjct: 262 TMTCEVSSSNPEYTTVSWLKDGTSL-KKQNTFTLNLREVTKDQS 304
>AB013000-1|BAA36569.1| 88|Homo sapiens CD22 protein.
Length = 88
Score = 32.3 bits (70), Expect = 2.6
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +2
Query: 215 TLTVKIQSKNPSAFTLSVPHEGTSL*KYAARFTLGLTYITRNTS 346
T+T ++ S NP T+S +GTSL K FTL L +T++ S
Sbjct: 22 TMTCEVSSSNPEYTTVSWLKDGTSL-KKQNTFTLNLREVTKDQS 64
>S61375-1|AAC18956.1| 662|Homo sapiens CD22 protein protein.
Length = 662
Score = 31.9 bits (69), Expect = 3.4
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +2
Query: 215 TLTVKIQSKNPSAFTLSVPHEGTSL*KYAARFTLGLTYITRNTS 346
T+T ++ S NP T+S +GTSL K FTL L +T++ S
Sbjct: 142 TMTCEVSSTNPEYTTVSWLKDGTSL-KKQNTFTLNLREVTKDQS 184
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,395,277
Number of Sequences: 237096
Number of extensions: 2433155
Number of successful extensions: 3507
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3507
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12047931574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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