Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16d09f
         (785 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    25   3.5  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    23   8.1  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    23   8.1  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   8.1  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   8.1  

>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 147 FLVCWRYLLVVQSQHFYLPSF 85
           F VCW  L ++ + + Y P+F
Sbjct: 475 FFVCWAPLHILNTVYLYSPTF 495


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 722 HQRVETERLQARVVHFQ 672
           HQR++ +RL+  V H Q
Sbjct: 206 HQRIDEDRLEIHVNHLQ 222


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 176 KVWSPDIMCVNGGD 217
           KVW PDI+  N  D
Sbjct: 107 KVWKPDIVLFNNAD 120


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 215 DNVCSLLPHNAVQD 256
           DN+C  LP + VQD
Sbjct: 131 DNLCQFLPQDRVQD 144


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 666 HQLEVYDARLKAFGLNSLVVDGHDVTELVKAFD 764
           + LEV+D  L   GL  L +  + +TEL   F+
Sbjct: 557 NHLEVFDYALIPTGLQWLDIHANKITELGNYFE 589


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 730,220
Number of Sequences: 2352
Number of extensions: 16046
Number of successful extensions: 280
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 280
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82328994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)