Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16d08f
         (751 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    54   1e-09
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    24   1.8  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    24   1.8  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   2.3  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 54.4 bits (125), Expect = 1e-09
 Identities = 54/172 (31%), Positives = 77/172 (44%), Gaps = 8/172 (4%)
 Frame = +3

Query: 243 IIHHEWVLTAAHCL--ANRINFVVRLG-----LTNLTRPDYLVETTHKFIHPRY-IEILG 398
           II   +VLTAAHC+   N     + +G         T    L       IHP+Y I    
Sbjct: 192 IISKRYVLTAAHCIIDENTTKLAIVVGEHDWSSKTETNATVLHSINKVIIHPKYDIIEKD 251

Query: 399 GVQTDDIALVKLNHHIPYSRYIQPCRLQNSEQKNINYEGAIFTVSGYGRTDDPWNGGVAS 578
             Q +DIAL+K    I +   + P  L      + ++ G+  TV G+G T   +N G+ S
Sbjct: 252 DWQINDIALLKTEKDIKFGDKVGPACLPFQHFLD-SFAGSDVTVLGWGHTS--FN-GMLS 307

Query: 579 EILLWVHLRGITNEQCLTHYPNSRVIQKQTLCAAYYNDTAQSSCQGDSGGPL 734
            IL    L  +T  +C  +Y N   I    +C AY     + +CQ DSGGP+
Sbjct: 308 HILQKTTLNMLTQVECYKYYGN---IMVNAMC-AYAK--GKDACQMDSGGPV 353


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
 Frame = +3

Query: 528 VSGYGRTDDP----WNGGVASEILLWVHLRGITNEQCLTHYPNSRVIQKQTLC 674
           ++ YG T D     W  G   +++  +HL   T E+  T Y NS+    +  C
Sbjct: 178 MASYGWTTDDLVFLWKEGDPVQVVKNLHLPRFTLEKFFTDYCNSKTNTGEYSC 230


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
 Frame = +3

Query: 528 VSGYGRTDDP----WNGGVASEILLWVHLRGITNEQCLTHYPNSRVIQKQTLC 674
           ++ YG T D     W  G   +++  +HL   T E+  T Y NS+    +  C
Sbjct: 178 MASYGWTTDDLVFLWKEGDPVQVVKNLHLPRFTLEKFFTDYCNSKTNTGEYSC 230


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +1

Query: 202 WSAPSGESAPAAVQSFTTNGS*LRPTASPIASTSW 306
           W+A S E++  A   F T      P + PI  T W
Sbjct: 32  WTATSHEASAPAEGKFKTVSKVPGPFSLPIFGTRW 66


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,849
Number of Sequences: 438
Number of extensions: 4774
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)