Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16d07f
         (756 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr...    31   0.88 
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr...    31   0.88 
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p...    31   0.88 

>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
            F25F2.2 protein.
          Length = 4307

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 21/74 (28%), Positives = 38/74 (51%)
 Frame = -3

Query: 460  IFSGALFSAIEGKITATMRRLNLARRRQSIASDPTVVESLTIGCDTKVHCTRGKFTVRGK 281
            +F    ++A   + T+  +RL   +   S  +D T+  SL+   D ++H   G  T+ G+
Sbjct: 2200 VFEKLKYTASTPESTSIGQRLLTIKATTSDEND-TIEYSLSGSKDIEIHPETGDVTITGQ 2258

Query: 280  LPSEESRNKHLKLV 239
            L  E+++   LKLV
Sbjct: 2259 LDYEKTQKYDLKLV 2272


>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
            F25F2.2 protein.
          Length = 4307

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 21/74 (28%), Positives = 38/74 (51%)
 Frame = -3

Query: 460  IFSGALFSAIEGKITATMRRLNLARRRQSIASDPTVVESLTIGCDTKVHCTRGKFTVRGK 281
            +F    ++A   + T+  +RL   +   S  +D T+  SL+   D ++H   G  T+ G+
Sbjct: 2200 VFEKLKYTASTPESTSIGQRLLTIKATTSDEND-TIEYSLSGSKDIEIHPETGDVTITGQ 2258

Query: 280  LPSEESRNKHLKLV 239
            L  E+++   LKLV
Sbjct: 2259 LDYEKTQKYDLKLV 2272


>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
            protein F25F2.2 protein.
          Length = 4307

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 21/74 (28%), Positives = 38/74 (51%)
 Frame = -3

Query: 460  IFSGALFSAIEGKITATMRRLNLARRRQSIASDPTVVESLTIGCDTKVHCTRGKFTVRGK 281
            +F    ++A   + T+  +RL   +   S  +D T+  SL+   D ++H   G  T+ G+
Sbjct: 2200 VFEKLKYTASTPESTSIGQRLLTIKATTSDEND-TIEYSLSGSKDIEIHPETGDVTITGQ 2258

Query: 280  LPSEESRNKHLKLV 239
            L  E+++   LKLV
Sbjct: 2259 LDYEKTQKYDLKLV 2272


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,613,169
Number of Sequences: 27780
Number of extensions: 323701
Number of successful extensions: 850
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)