Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16d06f
(754 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78536-2|CAB01716.1| 363|Caenorhabditis elegans Hypothetical pr... 77 2e-14
AF016664-11|AAK72083.1| 204|Caenorhabditis elegans Hypothetical... 77 2e-14
Z49887-5|CAE17773.1| 184|Caenorhabditis elegans Hypothetical pr... 75 4e-14
Z74037-3|CAA98491.1| 289|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z78536-1|CAB01715.2| 417|Caenorhabditis elegans Hypothetical pr... 62 3e-10
Z68108-4|CAA92136.1| 246|Caenorhabditis elegans Hypothetical pr... 51 1e-06
Z70307-5|CAA94331.1| 209|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z70308-1|CAA94351.1| 213|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z70308-2|CAA94349.1| 212|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U42839-2|AAC69015.1| 425|Caenorhabditis elegans Venom-allergen-... 42 4e-04
U42839-1|AAM54195.1| 424|Caenorhabditis elegans Venom-allergen-... 42 4e-04
AF112356-1|AAD27559.1| 425|Caenorhabditis elegans venom allerge... 42 4e-04
Z70308-5|CAA94348.1| 207|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z70307-6|CAA94332.1| 210|Caenorhabditis elegans Hypothetical pr... 41 0.001
U23514-11|AAM48531.1| 287|Caenorhabditis elegans Long protein 1... 36 0.023
U23514-10|AAK95879.1| 301|Caenorhabditis elegans Long protein 1... 36 0.023
U23514-9|AAC46538.1| 312|Caenorhabditis elegans Long protein 1,... 36 0.023
AF016661-5|AAB66052.1| 207|Caenorhabditis elegans Hypothetical ... 36 0.023
Z73911-1|CAA98140.1| 262|Caenorhabditis elegans Hypothetical pr... 36 0.031
Z73896-3|CAA98060.1| 208|Caenorhabditis elegans Hypothetical pr... 36 0.031
Z70307-2|CAA94335.1| 208|Caenorhabditis elegans Hypothetical pr... 36 0.041
Z81527-1|CAB04269.3| 290|Caenorhabditis elegans Hypothetical pr... 34 0.12
AC006655-3|AAF39874.1| 208|Caenorhabditis elegans Hypothetical ... 34 0.12
AF078781-1|AAC26915.2| 258|Caenorhabditis elegans Hypothetical ... 31 0.88
Z82092-1|CAB05010.1| 196|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z70308-6|CAA94344.1| 207|Caenorhabditis elegans Hypothetical pr... 29 2.7
AF273830-1|AAG15179.1| 598|Caenorhabditis elegans nuclear recep... 29 2.7
AC006671-1|AAF39914.2| 593|Caenorhabditis elegans Nuclear hormo... 29 2.7
Z35719-4|CAA84798.1| 279|Caenorhabditis elegans Hypothetical pr... 29 3.5
U40419-4|AAA81424.3| 1785|Caenorhabditis elegans Novel channel t... 29 3.5
DQ917241-1|ABI94564.1| 1763|Caenorhabditis elegans four domain-t... 29 3.5
AY555272-1|AAS65872.1| 1785|Caenorhabditis elegans four domain-t... 29 3.5
AC006666-2|AAK21416.2| 244|Caenorhabditis elegans Hypothetical ... 29 3.5
Z81548-4|CAB04465.1| 916|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z81503-5|CAB04114.1| 916|Caenorhabditis elegans Hypothetical pr... 28 6.2
AC006627-4|AAK85459.1| 712|Caenorhabditis elegans Hypothetical ... 28 6.2
AF098995-3|AAC67483.1| 276|Caenorhabditis elegans F-box b prote... 28 8.2
AC006801-2|AAF60751.1| 914|Caenorhabditis elegans Hypothetical ... 28 8.2
AC006717-1|AAY55883.2| 101|Caenorhabditis elegans Hypothetical ... 28 8.2
>Z78536-2|CAB01716.1| 363|Caenorhabditis elegans Hypothetical
protein C07A4.3 protein.
Length = 363
Score = 76.6 bits (180), Expect = 2e-14
Identities = 44/154 (28%), Positives = 83/154 (53%), Gaps = 9/154 (5%)
Frame = +2
Query: 143 DFENEALEVHNEYRREHGVSPLVINKEISKISQKWAEELA-KRDSLAYSLNQRYGESVYC 319
D + + HN+YR H + ++ ++ ++QKW++E+A + L + +YGE++
Sbjct: 199 DLKKWIVHFHNKYRAHHSSPAVTVDSNLTNLAQKWSDEMAFHKKCLVHEQPSKYGENLTS 258
Query: 320 -GWSPDPNTKIKARDCVDKWYSEINEFSFGK-EPEVLN-CGHFTQIIWRSTSELGIGSAK 490
S P+ K A + +Y+E F++ + P + GHFTQ++W+++ ++G+G +
Sbjct: 259 FASSKFPSPKTCAAALIHGFYTEGYGFNYTRFNPGSWSKVGHFTQLLWKNSRKIGVGVSV 318
Query: 491 SKTGKL---YVVANYYPPGNY--SGLFVKNVLPP 577
+K G + YV Y PPGN S ++ NV P
Sbjct: 319 AKRGTMYHVYVCIKYDPPGNMQTSEAYMDNVRAP 352
>AF016664-11|AAK72083.1| 204|Caenorhabditis elegans Hypothetical
protein D2062.1 protein.
Length = 204
Score = 76.6 bits (180), Expect = 2e-14
Identities = 46/150 (30%), Positives = 82/150 (54%), Gaps = 12/150 (8%)
Frame = +2
Query: 170 HNEYRREHGVSPLVINKEISKISQKWAEELAKRDSLAYSLNQRYGESV--YCGWSPDPNT 343
HN YR +HG PLV + + +++WA+E+AK +++ ++YGE+V +C P
Sbjct: 55 HNLYRSKHGAPPLVADPVMDVAAKRWADEMAKSGWISHEKPRKYGENVAMFCQSGCWPLP 114
Query: 344 KIKARDCVDKWYSEINEFSFGK-EPEVL-NCGHFTQIIWRSTSELGIGSAKSKTGK---- 505
+ A+ V +Y E + + +PE+L GHFTQI+W+S+ ++G+G + K+ +
Sbjct: 115 QTLAQAMVHLFYIEGIGYDYSSFKPELLKENGHFTQIVWKSSRKIGVGISIGKSSQPPYI 174
Query: 506 --LYVVANYYPPGNY--SGLFVKNVLPPGA 583
++ + PPGN ++ NV P A
Sbjct: 175 PTMFHCVKFDPPGNVLAQQYYLSNVQRPTA 204
>Z49887-5|CAE17773.1| 184|Caenorhabditis elegans Hypothetical
protein F09B9.5 protein.
Length = 184
Score = 75.4 bits (177), Expect = 4e-14
Identities = 38/115 (33%), Positives = 66/115 (57%)
Frame = +2
Query: 143 DFENEALEVHNEYRREHGVSPLVINKEISKISQKWAEELAKRDSLAYSLNQRYGESVYCG 322
+F ++ L HN R+ H L ++E+S+++Q+WA++LAK+ +++S GE++
Sbjct: 9 EFVDQMLLEHNTRRKMHSAPNLECSEELSEMAQQWADKLAKQAHISFSELSGIGENITF- 67
Query: 323 WSPDPNTKIKARDCVDKWYSEINEFSFGKEPEVLNCGHFTQIIWRSTSELGIGSA 487
+ PD I A V+ WY E ++ + +FTQ+IWRST E+G+G A
Sbjct: 68 FPPD----IDAESVVEHWYQEHEKYEYETPGWQTGTNYFTQVIWRSTKEIGVGCA 118
>Z74037-3|CAA98491.1| 289|Caenorhabditis elegans Hypothetical
protein F57B7.2 protein.
Length = 289
Score = 69.7 bits (163), Expect = 2e-12
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 3/145 (2%)
Frame = +2
Query: 143 DFENEALEVHNEYRREHGVSPLVINKEISKISQKWAEELAKRDSLAYSLNQRYGESVYCG 322
+F+ L+ HNE R+ +G L + E+++++ WA +LA R + Y GE++
Sbjct: 112 NFQRSCLDAHNECRQRYGNENLCWSTELAEMAHAWAVKLADRGRVLYPELPGIGENLILK 171
Query: 323 WSPDPNTKIKARDCVDKWYSEINEFSFGKEPEVLNCGHFTQIIWRSTSELGIGSAKSKTG 502
+ + + ++ + +W E F F K C F+Q++W+ T+ELG +
Sbjct: 172 EANEQSHLPTGQEVIQEWEKEAQFFDFDKPRWNPKCQRFSQVVWKDTTELGAARYWNTAN 231
Query: 503 KLYVVANYYPP---GNYSGLFVKNV 568
V +Y P N G F NV
Sbjct: 232 NCVAVVCFYRPAGNSNAPGEFASNV 256
>Z78536-1|CAB01715.2| 417|Caenorhabditis elegans Hypothetical
protein C07A4.2 protein.
Length = 417
Score = 62.5 bits (145), Expect = 3e-10
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 20/158 (12%)
Frame = +2
Query: 170 HNEYRREHGVSPLVINKEISKISQKWAEELA-KRDSLAYSLNQRYGESV-YCGWSPDPNT 343
HN YR +HG L+ + + ++WA+ELA + L + + YGE++ + G P+
Sbjct: 260 HNVYRSKHGAPALISDSVLDSRGKRWADELAYHKGCLVHEQPRTYGENLFFFGARHLPSP 319
Query: 344 KIKARDCVDKWYSE-IN-EFSFGKEPEVLNCGHFTQIIWRSTSELGIGSAKSKTGK---- 505
+ A + +Y E I +S + GHFTQ+IW+++ ++G+G + K+
Sbjct: 320 QTLAAAVIQSFYLEGIGYNYSSWRPMSFFKTGHFTQLIWKNSRKIGVGVSIVKSSSIRSP 379
Query: 506 ----------LYVVANYYPPGNYSG--LFVKNVLPPGA 583
+YVV Y P GN+ ++ NV P A
Sbjct: 380 CVSSSPNMYFIYVVVKYDPAGNFESHKAYLNNVERPVA 417
>Z68108-4|CAA92136.1| 246|Caenorhabditis elegans Hypothetical
protein T05A10.5 protein.
Length = 246
Score = 50.8 bits (116), Expect = 1e-06
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 9/115 (7%)
Frame = +2
Query: 224 ISKISQKWAEELAKRDSLAYSLNQRYGESVYCGWSPDPNTKIKARDCVDKWYSEINEFSF 403
+ + +Q WA S Y G+++Y +P+ + V+KW+ E+ EF
Sbjct: 98 LERFAQNWANNCVFAHSAHYE-RPNQGQNLYMSSFSNPDPRSLIHTAVEKWWQELEEFGT 156
Query: 404 GKE----PEVLNC-----GHFTQIIWRSTSELGIGSAKSKTGKLYVVANYYPPGN 541
+ PE+ + GH+TQ+ W T LG G A YVV +Y P GN
Sbjct: 157 PIDNVLTPELWDLKGKAIGHYTQMAWDRTYRLGCGIANCPK-MSYVVCHYGPAGN 210
>Z70307-5|CAA94331.1| 209|Caenorhabditis elegans Hypothetical
protein C39E9.5 protein.
Length = 209
Score = 50.0 bits (114), Expect = 2e-06
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 14/126 (11%)
Frame = +2
Query: 248 AEELAKRDSLAYSLNQRYGESVYCGWSPDPNTKIK--ARDCVDKWYSEINEFSFGKEPEV 421
A+ A + +S ++ YGE+++ +S P T + + VD W SE F +
Sbjct: 68 AQNYANGCPMQHSPDKSYGENLFWAYSSSPITDLDKYVQSAVDTWVSEFQMFGWNSNKFT 127
Query: 422 L-----NCGHFTQIIWRSTSELGIG-------SAKSKTGKLYVVANYYPPGNYSGLFVKN 565
GH TQ+ W +T ++G G S + + K +V Y PGNY LF KN
Sbjct: 128 TALWNTGIGHATQVAWSATGQVGCGAKNCGADSVRVGSYKATIVCQYKVPGNY--LF-KN 184
Query: 566 VLPPGA 583
+ GA
Sbjct: 185 IYNSGA 190
>Z70308-1|CAA94351.1| 213|Caenorhabditis elegans Hypothetical
protein F49E11.4 protein.
Length = 213
Score = 43.2 bits (97), Expect = 2e-04
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 22/160 (13%)
Frame = +2
Query: 137 SNDFENEALEVHNEYRREHGVSPLV---INKEISKISQK--WAEEL-------AKRDSLA 280
S + + L VHNE+R + + L + K + + +K W+++L A+
Sbjct: 21 SKEGQLNLLNVHNEFRSQLALGQLSFRGVKKPSASMMRKISWSKKLTNAATKFAETCPKN 80
Query: 281 YSLNQRYGESVYCGWSPDPNTKIK-ARDCVDKWYSEI-----NEFSFGKEPEVLNCGHFT 442
+S+ GES++ +S +T + A KW++E + + + GH
Sbjct: 81 HSVVMNTGESIFWHFSSSLSTPEQYATLAPQKWWNEFETNGWDSLIYNHASQRFQIGHAV 140
Query: 443 QIIWRSTSELGIGSAKSKTG----KLYVVANYYPPGNYSG 550
Q+ W +TS++G G +K G + VV Y+ GN G
Sbjct: 141 QMAWHTTSKVGCGYSKCAVGTPEQTMVVVCRYFQKGNIEG 180
>Z70308-2|CAA94349.1| 212|Caenorhabditis elegans Hypothetical
protein F49E11.5 protein.
Length = 212
Score = 42.3 bits (95), Expect = 4e-04
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Frame = +2
Query: 302 GESVYCGWSP---DPNTKIKARDCVDKWYSEINEFSFGKE---PEVLNCG--HFTQIIWR 457
GE++Y SP + ++ + W SE F + E+ N G H TQ+ W
Sbjct: 91 GENMYWWTSPVVTQTDAELLGNRSANLWESEFQRFGWNGNLLTEELFNSGIGHATQMAWA 150
Query: 458 STSELGIGSAKSKT---GKLYVVANYY-PPGNYSGL 553
+T+++G G +K + G YVV Y P GNY G+
Sbjct: 151 TTNKIGCGISKCSSDSFGTQYVVVCLYSPAGNYIGM 186
>U42839-2|AAC69015.1| 425|Caenorhabditis elegans
Venom-allergen-like protein protein1, isoform a protein.
Length = 425
Score = 42.3 bits (95), Expect = 4e-04
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Frame = +2
Query: 302 GESVYCGWSPDPNTKIK-ARDCVDKWYSEINEFSFGKEPEVLNC------GHFTQIIWRS 460
GE++Y S + KI+ A D W+SE+ +F G + + GH+TQ+ W
Sbjct: 306 GENLYM-ISINNMPKIQTAEDSSKAWWSELKDFGVGSDNILTQAVFDRGVGHYTQMAWEG 364
Query: 461 TSELGIGSAKSKTGKLYVVANYYPPGNY 544
T+E+G T Y V Y P GNY
Sbjct: 365 TTEIGCFVENCPT-FTYSVCQYGPAGNY 391
>U42839-1|AAM54195.1| 424|Caenorhabditis elegans
Venom-allergen-like protein protein1, isoform b protein.
Length = 424
Score = 42.3 bits (95), Expect = 4e-04
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Frame = +2
Query: 302 GESVYCGWSPDPNTKIK-ARDCVDKWYSEINEFSFGKEPEVLNC------GHFTQIIWRS 460
GE++Y S + KI+ A D W+SE+ +F G + + GH+TQ+ W
Sbjct: 305 GENLYM-ISINNMPKIQTAEDSSKAWWSELKDFGVGSDNILTQAVFDRGVGHYTQMAWEG 363
Query: 461 TSELGIGSAKSKTGKLYVVANYYPPGNY 544
T+E+G T Y V Y P GNY
Sbjct: 364 TTEIGCFVENCPT-FTYSVCQYGPAGNY 390
>AF112356-1|AAD27559.1| 425|Caenorhabditis elegans venom
allergen-like protein protein.
Length = 425
Score = 42.3 bits (95), Expect = 4e-04
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Frame = +2
Query: 302 GESVYCGWSPDPNTKIK-ARDCVDKWYSEINEFSFGKEPEVLNC------GHFTQIIWRS 460
GE++Y S + KI+ A D W+SE+ +F G + + GH+TQ+ W
Sbjct: 306 GENLYM-ISINNMPKIQTAEDSSKAWWSELKDFGVGSDNILTQAVFDRGVGHYTQMAWEG 364
Query: 461 TSELGIGSAKSKTGKLYVVANYYPPGNY 544
T+E+G T Y V Y P GNY
Sbjct: 365 TTEIGCFVENCPT-FTYSVCQYGPAGNY 391
>Z70308-5|CAA94348.1| 207|Caenorhabditis elegans Hypothetical
protein F49E11.9 protein.
Length = 207
Score = 41.9 bits (94), Expect = 5e-04
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 14/115 (12%)
Frame = +2
Query: 248 AEELAKRDSLAYSLNQRYGESVYCGW-SPDPNTKIKARD-CVDKWYSEINEFSF---GKE 412
A+ A +S YGE++Y W S D + + W E +F + +
Sbjct: 66 AQNYANTCPTGHSKGTGYGENLYWSWTSADVGSLDSYGEIAAAAWEKEFQDFGWKSNAMD 125
Query: 413 PEVLNCG--HFTQIIWRSTSELGIG-------SAKSKTGKLYVVANYYPPGNYSG 550
+ N G H TQ+ W +TS +G G ++ K+ VV Y PPGN G
Sbjct: 126 TTLFNSGIGHATQMAWANTSSIGCGVKNCGRDASMRNMNKIAVVCQYSPPGNTMG 180
>Z70307-6|CAA94332.1| 210|Caenorhabditis elegans Hypothetical
protein C39E9.6 protein.
Length = 210
Score = 40.7 bits (91), Expect = 0.001
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 15/148 (10%)
Frame = +2
Query: 185 REHGVSPLVINKEISKISQKWAEELAKRDSLAYSLNQR-YGESVYCGWSPDPNTKIK--A 355
R+ + ++ K S + Q A+ A + +S N + GE++Y WS DP + +
Sbjct: 48 RKESATNMLKMKWDSSLEQS-AQNYANGCHMQHSTNDKTIGENLYWEWSGDPFSDLDKFG 106
Query: 356 RDCVDKWYSEINEFSFGKEP---EVLNCG--HFTQIIWRSTSELGIG----SAKSKTGKL 508
+ W E +F + + N G H TQI W T ++G G ++ G L
Sbjct: 107 KIATVAWDHEFEQFGWNSNKFSLALFNTGVAHATQIAWAPTGKIGCGVKNCGRDARRGGL 166
Query: 509 Y---VVANYYPPGNYSGLFVKNVLPPGA 583
+ +V Y GN+ F KN+ GA
Sbjct: 167 FQVAIVCQYRVRGNF---FFKNIYNSGA 191
>U23514-11|AAM48531.1| 287|Caenorhabditis elegans Long protein 1,
isoform c protein.
Length = 287
Score = 36.3 bits (80), Expect = 0.023
Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Frame = +2
Query: 170 HNEYRR---EHGVSPLVINKEISKISQKWAEELAKRDSLAYSLNQRYGESVYCGWSPDPN 340
HN YRR ++ L + E++ +Q+ A+ R S +N GE+++ +P N
Sbjct: 88 HNRYRRMVPASDMNMLYWSDELAASAQRHADTCDFRHSRG-RIN--VGENIWA--APYSN 142
Query: 341 TKIKARDCVDKWYSEINEFSFGKEPEVLNC-GHFTQIIWRSTSELGIGSAKSK 496
D + W++E++ G +C GH+ Q++W T+ +G G ++ +
Sbjct: 143 YS----DAISIWFNEVHNPRCGCNHAYKHCCGHYVQVVWAKTNLVGCGFSRCR 191
>U23514-10|AAK95879.1| 301|Caenorhabditis elegans Long protein 1,
isoform b protein.
Length = 301
Score = 36.3 bits (80), Expect = 0.023
Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Frame = +2
Query: 170 HNEYRR---EHGVSPLVINKEISKISQKWAEELAKRDSLAYSLNQRYGESVYCGWSPDPN 340
HN YRR ++ L + E++ +Q+ A+ R S +N GE+++ +P N
Sbjct: 88 HNRYRRMVPASDMNMLYWSDELAASAQRHADTCDFRHSRG-RIN--VGENIWA--APYSN 142
Query: 341 TKIKARDCVDKWYSEINEFSFGKEPEVLNC-GHFTQIIWRSTSELGIGSAKSK 496
D + W++E++ G +C GH+ Q++W T+ +G G ++ +
Sbjct: 143 YS----DAISIWFNEVHNPRCGCNHAYKHCCGHYVQVVWAKTNLVGCGFSRCR 191
>U23514-9|AAC46538.1| 312|Caenorhabditis elegans Long protein 1,
isoform a protein.
Length = 312
Score = 36.3 bits (80), Expect = 0.023
Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Frame = +2
Query: 170 HNEYRR---EHGVSPLVINKEISKISQKWAEELAKRDSLAYSLNQRYGESVYCGWSPDPN 340
HN YRR ++ L + E++ +Q+ A+ R S +N GE+++ +P N
Sbjct: 88 HNRYRRMVPASDMNMLYWSDELAASAQRHADTCDFRHSRG-RIN--VGENIWA--APYSN 142
Query: 341 TKIKARDCVDKWYSEINEFSFGKEPEVLNC-GHFTQIIWRSTSELGIGSAKSK 496
D + W++E++ G +C GH+ Q++W T+ +G G ++ +
Sbjct: 143 YS----DAISIWFNEVHNPRCGCNHAYKHCCGHYVQVVWAKTNLVGCGFSRCR 191
>AF016661-5|AAB66052.1| 207|Caenorhabditis elegans Hypothetical
protein F02E11.5 protein.
Length = 207
Score = 36.3 bits (80), Expect = 0.023
Identities = 43/154 (27%), Positives = 61/154 (39%), Gaps = 27/154 (17%)
Frame = +2
Query: 161 LEVHNEYRREHGVSPLVINKEISK-----ISQKWAEELAKRDSLAYSLN-------QRYG 304
++ HN R V NK + + KW +AK + AY+ +YG
Sbjct: 28 VDAHNTLRSSIAKGTYVANKTRKEPGSNILKMKWDPTIAK-SAQAYANTCPTGHGKSKYG 86
Query: 305 ESVYCGWSPDPNTKIKARD-----CVDKWYSEINEFSF--GKEPEVL---NCGHFTQIIW 454
E++Y WS IK+ D W SE ++ + K L GH TQ+ W
Sbjct: 87 ENLYWRWS---GAVIKSIDDYGVRASGAWASEFQKYGWKTNKLDSALFKTGIGHATQMAW 143
Query: 455 RSTSELG-----IGSAKSKTGKLYVVANYYPPGN 541
ST +G G K+K K+ VV Y GN
Sbjct: 144 ASTGSIGCGVKNCGMDKNKMYKVAVVCQYSARGN 177
>Z73911-1|CAA98140.1| 262|Caenorhabditis elegans Hypothetical
protein T12A7.3 protein.
Length = 262
Score = 35.9 bits (79), Expect = 0.031
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 16/118 (13%)
Frame = +2
Query: 239 QKWAEELAKRDSLAYSLNQRYGESVYCGWSPDPNTKIKARDCVD-KWYSEINEFSFGKEP 415
++ A A+++ +S GE+++ WS P K W E E F
Sbjct: 118 ERSAYSFAQKNPSQHSFIPDIGENLFWHWSTRPGDFNKYGPMAALSWIKEFRE-KFWDSN 176
Query: 416 EVLN------CGHFTQIIWRSTSELGIGSAKSK-----TG----KLYVVANYYPPGNY 544
+ N GH TQ++W T ++G + K TG K+ VV +Y+P GNY
Sbjct: 177 ILTNDLFGSGVGHATQMVWADTYQMGCAVSHFKEIHKRTGRPITKICVVCHYWPKGNY 234
>Z73896-3|CAA98060.1| 208|Caenorhabditis elegans Hypothetical
protein F09E8.5 protein.
Length = 208
Score = 35.9 bits (79), Expect = 0.031
Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 12/131 (9%)
Frame = +2
Query: 188 EHGVSPLVINKEISKISQKWAEELAKRDSLAYSLNQRYGESVYCGWSPDPNTKIKARDCV 367
+H S ++ K + ++ ++ A R +S GE++Y W+ T I +
Sbjct: 50 KHAASDMLKMKWLRSLATS-SQIYANRCPTGHSNMIGVGENLYWYWTSGTITNIDQFGAM 108
Query: 368 DK--WYSEINEFSFGKEPEVLNC-----GHFTQIIWRSTSELGIGSAK-----SKTGKLY 511
W E ++ + ++ GH TQ+ W T+ +G G + K+
Sbjct: 109 ASAAWEKEFQDYGWSSNTLTMSLFNSGVGHATQMAWAKTNLIGCGVKNCGMDTNGMNKVA 168
Query: 512 VVANYYPPGNY 544
VV +Y P GNY
Sbjct: 169 VVCHYQPQGNY 179
>Z70307-2|CAA94335.1| 208|Caenorhabditis elegans Hypothetical
protein C39E9.2 protein.
Length = 208
Score = 35.5 bits (78), Expect = 0.041
Identities = 29/111 (26%), Positives = 44/111 (39%), Gaps = 12/111 (10%)
Frame = +2
Query: 248 AEELAKRDSLAYSLNQRYGESVYCGWSPDPNTKIKARDCVDK--WYSEINEFSFGKEPEV 421
A+ A + +S GE++Y W+ T I W E ++ +
Sbjct: 69 AQAYANKCPTGHSGAAGLGENLYWYWTSATITNIDQFGATGSAAWEKEFQDYGWSSNTLS 128
Query: 422 LNC-----GHFTQIIWRSTSELGIG---SAKSKTG--KLYVVANYYPPGNY 544
++ GH TQ+ W T+ +G G K G K+ VV Y P GNY
Sbjct: 129 MSLFNTGIGHATQMAWAKTNLIGCGVKNCGKDTNGFNKVTVVCQYKPQGNY 179
>Z81527-1|CAB04269.3| 290|Caenorhabditis elegans Hypothetical
protein F35E12.1 protein.
Length = 290
Score = 33.9 bits (74), Expect = 0.12
Identities = 26/103 (25%), Positives = 38/103 (36%), Gaps = 14/103 (13%)
Frame = +2
Query: 299 YGESVYCGWSPDPNTK--IKARDCVDKWYSEINEFS-----FGKEPEVLNCGHFTQIIWR 457
YGE+++ WS T I + W E + + K+ E GH TQ++W
Sbjct: 166 YGENMHRSWSSKEITDLDIYGTKAAESWAGEFQKKGWESNIYTKDTEKSGIGHATQMVWS 225
Query: 458 STSELGIG-------SAKSKTGKLYVVANYYPPGNYSGLFVKN 565
+G G K K+ VV Y GN + N
Sbjct: 226 QAYLIGCGVKDCGPDKTKKNMHKITVVCRYIEKGNIKDTNIYN 268
>AC006655-3|AAF39874.1| 208|Caenorhabditis elegans Hypothetical
protein H10D18.2 protein.
Length = 208
Score = 33.9 bits (74), Expect = 0.12
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 14/95 (14%)
Frame = +2
Query: 299 YGESVYCGWSPDPNTKIKARDCV--DKWYSEINEFSFGK---EPEVLN--CGHFTQIIWR 457
YGE++Y WS T + + W E ++ + + ++ + GH TQ+ W
Sbjct: 84 YGENLYWSWSSSAPTSLDKFGVAASNSWEKEFQDYGWESTYMDADLFDSGIGHATQMAWA 143
Query: 458 STSELGIG-------SAKSKTGKLYVVANYYPPGN 541
T+++G G S+ + K+ VV Y GN
Sbjct: 144 ETNKIGCGVKNCGKDSSMNNMYKVAVVCQYDQAGN 178
>AF078781-1|AAC26915.2| 258|Caenorhabditis elegans Hypothetical
protein B0545.3 protein.
Length = 258
Score = 31.1 bits (67), Expect = 0.88
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 9/46 (19%)
Frame = +2
Query: 431 GHFTQIIWRSTSELGIGSAK-------SKTGKLYVVA--NYYPPGN 541
GH TQI+W+ T +LG + S G+ Y VA YYP GN
Sbjct: 168 GHATQILWKETRKLGCAVQECPARQDGSLDGQKYNVAVCKYYPTGN 213
>Z82092-1|CAB05010.1| 196|Caenorhabditis elegans Hypothetical
protein ZK384.1 protein.
Length = 196
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +2
Query: 440 TQIIWRSTSELGIGSAKSKTGKLYVVANYYPPGNYSGLFVKNVLPP 577
+Q++W T +G G + + VV YY GN G + PP
Sbjct: 126 SQMVWAGTKYVGCGVKRCDPINVVVVCMYYQQGNLVGRPIYKEGPP 171
>Z70308-6|CAA94344.1| 207|Caenorhabditis elegans Hypothetical
protein F49E11.10 protein.
Length = 207
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +2
Query: 431 GHFTQIIWRSTSELGIG---SAKSKTG--KLYVVANYYPPGNYSGLFV 559
GH TQ+ W ++ +G G + G K+ VV Y P GN+ ++
Sbjct: 136 GHATQMAWAKSNLIGCGVKDCGRDSNGLNKVTVVCQYKPQGNFINQYI 183
>AF273830-1|AAG15179.1| 598|Caenorhabditis elegans nuclear receptor
NHR-88 protein.
Length = 598
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 195 PCSRLYSLWTSNASFSKSFDLEVNSLLIVLYV 100
P ++L SL N +K F + ++SLL+ LYV
Sbjct: 394 PLAKLSSLIGENVQLAKMFGIPIDSLLVELYV 425
>AC006671-1|AAF39914.2| 593|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 88, isoform a protein.
Length = 593
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 195 PCSRLYSLWTSNASFSKSFDLEVNSLLIVLYV 100
P ++L SL N +K F + ++SLL+ LYV
Sbjct: 389 PLAKLSSLIGENVQLAKMFGIPIDSLLVELYV 420
>Z35719-4|CAA84798.1| 279|Caenorhabditis elegans Hypothetical
protein F17C8.6 protein.
Length = 279
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +2
Query: 251 EELAKRDSLAYSLNQRYGESVYCGWSPD--PNTKIKARDCVDKWYSEINEFSFGKEPEVL 424
EEL +R+ L Y + + + W + N K K + + K S + F+F + EVL
Sbjct: 105 EELLQREELEYIIEEEVAKHTIRAWLENCLKNIKAKQNNTLGKMSSIGSTFAFPQSQEVL 164
Query: 425 NCG 433
G
Sbjct: 165 TKG 167
>U40419-4|AAA81424.3| 1785|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 2 protein.
Length = 1785
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +2
Query: 251 EELAKRDSLAYSLNQRYGESVYCGWSPD--PNTKIKARDCVDKWYSEINEFSFGKEPEVL 424
EEL +R+ L Y + + + W + N K K + + K S + F+F + EVL
Sbjct: 1611 EELLQREELEYIIEEEVAKHTIRAWLENCLKNIKAKQNNTLGKMSSIGSTFAFPQSQEVL 1670
Query: 425 NCG 433
G
Sbjct: 1671 TKG 1673
>DQ917241-1|ABI94564.1| 1763|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1763
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +2
Query: 251 EELAKRDSLAYSLNQRYGESVYCGWSPD--PNTKIKARDCVDKWYSEINEFSFGKEPEVL 424
EEL +R+ L Y + + + W + N K K + + K S + F+F + EVL
Sbjct: 1589 EELLQREELEYIIEEEVAKHTIRAWLENCLKNIKAKQNNTLGKMSSIGSTFAFPQSQEVL 1648
Query: 425 NCG 433
G
Sbjct: 1649 TKG 1651
>AY555272-1|AAS65872.1| 1785|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1785
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +2
Query: 251 EELAKRDSLAYSLNQRYGESVYCGWSPD--PNTKIKARDCVDKWYSEINEFSFGKEPEVL 424
EEL +R+ L Y + + + W + N K K + + K S + F+F + EVL
Sbjct: 1611 EELLQREELEYIIEEEVAKHTIRAWLENCLKNIKAKQNNTLGKMSSIGSTFAFPQSQEVL 1670
Query: 425 NCG 433
G
Sbjct: 1671 TKG 1673
>AC006666-2|AAK21416.2| 244|Caenorhabditis elegans Hypothetical
protein H31G24.3 protein.
Length = 244
Score = 29.1 bits (62), Expect = 3.5
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +2
Query: 230 KISQKWAEELAKRDSLAYSLNQRYGESVYCGWSPDPNTKIK-ARDCVDKWYSEINEFSF- 403
K+ +W+EEL + + ++ L R +V WS D KI +D + ++FS
Sbjct: 40 KLHAEWSEEL-ETEVVSIKLRHRR-RNVDDIWSMDATVKIHFEQDWLKGEVQVDSQFSNQ 97
Query: 404 GKEPEVLNCG 433
G+E E+LNCG
Sbjct: 98 GQEIEILNCG 107
>Z81548-4|CAB04465.1| 916|Caenorhabditis elegans Hypothetical
protein F14F7.5 protein.
Length = 916
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -2
Query: 432 PQFNTSGSLPKENSLISLYHLSTQSLALIFVFGSGDHPQ*TLSPYLWF 289
PQ GS P S S T SLAL+ + S P +S ++WF
Sbjct: 800 PQPGPRGSSPPAPSAPSAPETDTNSLALVDLTDSPADPTPEVSGFMWF 847
>Z81503-5|CAB04114.1| 916|Caenorhabditis elegans Hypothetical
protein F14F7.5 protein.
Length = 916
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -2
Query: 432 PQFNTSGSLPKENSLISLYHLSTQSLALIFVFGSGDHPQ*TLSPYLWF 289
PQ GS P S S T SLAL+ + S P +S ++WF
Sbjct: 800 PQPGPRGSSPPAPSAPSAPETDTNSLALVDLTDSPADPTPEVSGFMWF 847
>AC006627-4|AAK85459.1| 712|Caenorhabditis elegans Hypothetical
protein E01A2.2a protein.
Length = 712
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +2
Query: 107 RTMSRLFTSKSNDF-ENEALEVHNEYRREH 193
+T + TS+ +D E +A++ +NEY+ EH
Sbjct: 85 QTFKKFLTSQEDDISEEDAIKKYNEYKTEH 114
>AF098995-3|AAC67483.1| 276|Caenorhabditis elegans F-box b protein
protein 17 protein.
Length = 276
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 475 PQFTRRSPDYLCEMTTVQHFRLL 407
P + R S DY+CE VQ+F L
Sbjct: 169 PNYLRLSNDYICESILVQNFETL 191
>AC006801-2|AAF60751.1| 914|Caenorhabditis elegans Hypothetical
protein Y52D5A.1 protein.
Length = 914
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -2
Query: 501 PVLLFALPIPNSLVDLQIICVK*PQFNTSGSLPKENSLISL 379
PV+ L + NS+ DL +I + N+ LP NS+ L
Sbjct: 345 PVIYIFLKMSNSIFDLPVIYIFLKMSNSIFKLPMNNSIFDL 385
>AC006717-1|AAY55883.2| 101|Caenorhabditis elegans Hypothetical
protein Y14H12A.2 protein.
Length = 101
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 374 WYSEINEFSFGKEPEVLNCGHF 439
W S + F EP++L CGHF
Sbjct: 11 WASWPSPAKFSGEPDILQCGHF 32
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,964,459
Number of Sequences: 27780
Number of extensions: 324733
Number of successful extensions: 920
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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