Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16d04r
         (928 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      23   5.2  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   9.1  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    22   9.1  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    22   9.1  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    22   9.1  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    22   9.1  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    22   9.1  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 759 LMLNRYVLIACTHYFKAQLK 818
           L  +R VL AC+ YF+  LK
Sbjct: 43  LKAHRVVLSACSPYFRELLK 62


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 83  YRGWRIRPSSNPKNKLN 133
           Y GW +    N +NKLN
Sbjct: 205 YSGWYLNHDYNLENKLN 221


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 6/23 (26%), Positives = 16/23 (69%)
 Frame = +3

Query: 57  HIVKLNKTSTEDGAYGHHQILKI 125
           H+V +N+T+  DG+  +  ++++
Sbjct: 89  HVVTINETTYTDGSDDYSTLIRV 111


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 6/23 (26%), Positives = 16/23 (69%)
 Frame = +3

Query: 57  HIVKLNKTSTEDGAYGHHQILKI 125
           H+V +N+T+  DG+  +  ++++
Sbjct: 137 HVVTINETTYTDGSDDYSTLIRV 159


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -1

Query: 106 WPYAPSSVLVLFNLTI*NLNFPDRYCCYI 20
           WP   + + + +N T+ ++ FP  Y   I
Sbjct: 355 WPATTNYLYLTYNGTVHDVEFPGXYTMVI 383


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 6/23 (26%), Positives = 16/23 (69%)
 Frame = +3

Query: 57  HIVKLNKTSTEDGAYGHHQILKI 125
           H+V +N+T+  DG+  +  ++++
Sbjct: 137 HVVTINETTYTDGSDDYSTLIRV 159


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 6/23 (26%), Positives = 16/23 (69%)
 Frame = +3

Query: 57  HIVKLNKTSTEDGAYGHHQILKI 125
           H+V +N+T+  DG+  +  ++++
Sbjct: 137 HVVAINETTYTDGSDDYSTLIRV 159


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 237,412
Number of Sequences: 438
Number of extensions: 4983
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30234750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)