Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16d02f
         (816 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70750-8|CAA94743.1|  300|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z67737-5|CAA91541.2|  401|Caenorhabditis elegans Hypothetical pr...    29   4.0  
U21321-6|AAG00046.1|  206|Caenorhabditis elegans Hypothetical pr...    29   4.0  
Z82059-9|CAB04875.1|  292|Caenorhabditis elegans Hypothetical pr...    28   7.0  
AF129111-1|AAD37121.1|  292|Caenorhabditis elegans cell division...    28   7.0  
Z67737-4|CAA91539.2|  401|Caenorhabditis elegans Hypothetical pr...    28   9.2  
Z19154-5|CAA79557.1|  162|Caenorhabditis elegans Hypothetical pr...    28   9.2  
AF002198-5|AAF99934.2|  329|Caenorhabditis elegans Serpentine re...    28   9.2  

>Z70750-8|CAA94743.1|  300|Caenorhabditis elegans Hypothetical
           protein C50F4.8 protein.
          Length = 300

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 16/57 (28%), Positives = 25/57 (43%)
 Frame = +3

Query: 180 GCDTIAYCTMRCGVPIING*SHSESVSAQWLVLKPEISGQKTCALDSSDAGLWIGYC 350
           GC+ I  CT+ C VP I     SE+      + +   +  +  ALD++    W   C
Sbjct: 182 GCEYIT-CTLHCDVPTIAHECDSETAQLVIDLTRKSFASMEKMALDTNAVAKWPQVC 237


>Z67737-5|CAA91541.2|  401|Caenorhabditis elegans Hypothetical
           protein T01H10.6 protein.
          Length = 401

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
 Frame = +1

Query: 334 SGLAIVGSFIKIIDKSTHLNT-LHGKFAIAALVFTTVSLINGLGSLWAFELRRYIPINVS 510
           +G++IVG F+K  DK + LN  L     +  ++      I   GS+    +  YI IN+ 
Sbjct: 275 NGISIVGIFLKSADKMSKLNVGLTNIMTMTFILGVMADKIPRTGSIPLLGI--YIIINLL 332

Query: 511 KLIHIGIGIFVLPTSSIALCYGFDKSMFKSWISDEVAFTLIGCTSAFTVIISFNSFTT 684
            +I I I + VL T          K + KS+IS ++  T +G    +T  I     TT
Sbjct: 333 IMI-IAITVVVLITELRQWAVPRLK-LKKSYISRKLE-TFLGSPIEYTCAILLEFLTT 387


>U21321-6|AAG00046.1|  206|Caenorhabditis elegans Hypothetical
           protein ZK177.3 protein.
          Length = 206

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 495 SNQCIQTNSHWHWHLRVADVIHC 563
           S Q     SH+H H+R ++VIHC
Sbjct: 46  STQKTGLTSHYHGHIRQSNVIHC 68


>Z82059-9|CAB04875.1|  292|Caenorhabditis elegans Hypothetical
           protein T27E9.3 protein.
          Length = 292

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +3

Query: 633 RLYQRVHSNNQLQLIYDFSCQIMEMF 710
           RLY  VHS N+L L++++  Q ++ F
Sbjct: 65  RLYDVVHSENKLTLVFEYCDQDLKKF 90


>AF129111-1|AAD37121.1|  292|Caenorhabditis elegans cell division
           protein kinase 5 protein.
          Length = 292

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +3

Query: 633 RLYQRVHSNNQLQLIYDFSCQIMEMF 710
           RLY  VHS N+L L++++  Q ++ F
Sbjct: 65  RLYDVVHSENKLTLVFEYCDQDLKKF 90


>Z67737-4|CAA91539.2|  401|Caenorhabditis elegans Hypothetical
           protein T01H10.5 protein.
          Length = 401

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
 Frame = +1

Query: 334 SGLAIVGSFIKIIDKSTHLNT-LHGKFAIAALVFTTVSLINGLGSLWAFELRRYIPINVS 510
           +G++IVG F+K  DK + LN  L     +  ++      I   GS+    +  YI IN+ 
Sbjct: 275 NGISIVGIFLKSADKMSKLNVGLTNIMTMTFILGVMADKIPRTGSIPLLGI--YIIINLL 332

Query: 511 KLIHIGIGIFVLPTSSIALCYGFDKSMFKSWISDEVAFTLIGCTSAFTVIISFNSFTT 684
            +I I I + VL T          K + KS++S ++  T +G    +T  I     TT
Sbjct: 333 IMI-IAITVVVLITELRQWAVPRLK-LKKSYMSRKLE-TFLGSPIEYTCAILLEFLTT 387


>Z19154-5|CAA79557.1|  162|Caenorhabditis elegans Hypothetical
           protein C40H1.6 protein.
          Length = 162

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +3

Query: 312 LDSSDAGL-WIGYCWIFH*NYRQEHALEY 395
           L+S++ G  W G CW FH   + E  +E+
Sbjct: 55  LESNERGTKWFGKCWYFHNMVKYEFDVEF 83


>AF002198-5|AAF99934.2|  329|Caenorhabditis elegans Serpentine
           receptor, class x protein122 protein.
          Length = 329

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 14/74 (18%), Positives = 30/74 (40%)
 Frame = +1

Query: 466 LWAFELRRYIPINVSKLIHIGIGIFVLPTSSIALCYGFDKSMFKSWISDEVAFTLIGCTS 645
           +W  +  R+ P N+   + + I +F         C+      +  WI +    T +   +
Sbjct: 127 IWHMKKYRFNPTNIGIGVALLIAVFSFAVLLPEGCHYLFNRDYLGWIGEVTPCTKVAQET 186

Query: 646 AFTVIISFNSFTTF 687
            F +++   + TTF
Sbjct: 187 FFIIMVGVTAATTF 200


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,678,976
Number of Sequences: 27780
Number of extensions: 406075
Number of successful extensions: 1026
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1026
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)