Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16d01r
         (895 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973...    30   2.2  
05_06_0144 - 25973635-25973801,25973878-25973947,25974049-259741...    30   2.9  
11_06_0207 + 21214631-21216121                                         29   6.6  
04_04_0116 + 22877296-22877482,22877578-22877627,22879057-228791...    29   6.6  
01_06_0631 + 30732091-30732292,30732690-30732870,30732994-307331...    29   6.6  
01_01_1060 - 8363272-8365912,8366375-8366443,8366479-8366843,836...    28   8.7  

>08_02_0864 + 21994286-21994989,21996257-21996958,21997221-21997374,
            21997494-21997838,21998323-21999240,21999312-21999640,
            21999709-21999832,21999901-22000071,22000188-22001648,
            22002647-22002910,22003866-22004189
          Length = 1831

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = -2

Query: 879  TVRCYCSVQFQFGRTGCCISPLSSGEALRSVNRC 778
            TV CY +  F+  R  CC S L   + LRS++RC
Sbjct: 1540 TVTCYYAKSFEALRRSCCPSEL---DFLRSISRC 1570


>05_06_0144 -
           25973635-25973801,25973878-25973947,25974049-25974190,
           25974647-25974827,25975248-25975443
          Length = 251

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 14/55 (25%), Positives = 25/55 (45%)
 Frame = -1

Query: 895 LSVRCYCALLLQRTVSIWENGMLYFTSFIGGSPQVSEPLLLSVNSIMTSSFSLAR 731
           L++ C+C +L    + +W N   +        P+V  P  L+VN   +  F + R
Sbjct: 100 LTLLCHCIILTLAMLFLWSNASTFINKSPPNIPEVKIPEDLAVNVARSLRFEINR 154


>11_06_0207 + 21214631-21216121
          Length = 496

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -2

Query: 300 WEISTFIPPAVAVKADAWTMPAPILTPMFSTPNLSGKQ 187
           W    +I P++A KAD W +P  + TP+     L+ ++
Sbjct: 451 WPSPVWITPSIA-KADGWCVPCGVGTPVMGGRELARRE 487


>04_04_0116 +
           22877296-22877482,22877578-22877627,22879057-22879180,
           22879266-22879373,22879462-22880084
          Length = 363

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 11/44 (25%), Positives = 20/44 (45%)
 Frame = +2

Query: 602 FRSRTPVDGDYVYIFSGEVSGYDESVEVSSDSFTVIVYREDGAA 733
           FR  TP+      +  G ++GYD +  +  +    +    DGA+
Sbjct: 245 FRHPTPIGARIRQVMGGRIAGYDINYVIDGEGMRKVAAARDGAS 288


>01_06_0631 +
           30732091-30732292,30732690-30732870,30732994-30733135,
           30733228-30733297,30733383-30733549
          Length = 253

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 13/55 (23%), Positives = 26/55 (47%)
 Frame = -1

Query: 895 LSVRCYCALLLQRTVSIWENGMLYFTSFIGGSPQVSEPLLLSVNSIMTSSFSLAR 731
           L++ C+C +L    + +W N   +        P+V  P  L+VN  ++  + + R
Sbjct: 102 LTLVCHCLILSLAVLFLWSNASTFIHKSPPNIPEVKIPEDLTVNIALSLRYEINR 156


>01_01_1060 - 8363272-8365912,8366375-8366443,8366479-8366843,
            8367403-8367550,8367630-8367873,8368105-8368407,
            8368639-8368851,8368927-8369002,8369533-8369561,
            8369610-8369984,8371784-8371927,8374053-8374086
          Length = 1546

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -1

Query: 445  SNQPIPHIIALDPSLHGWTHNPEILNPDDANIVEVLHTTAG 323
            S  P+P+ +  +  L GW   PE    + AN+  V+  TAG
Sbjct: 1080 SPDPVPYKLLAEKEL-GWGGPPEFSTDNPANMASVMGGTAG 1119


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,765,640
Number of Sequences: 37544
Number of extensions: 508016
Number of successful extensions: 1542
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1541
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)