Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16c22r
(903 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC117222-1|AAI17223.1| 832|Homo sapiens SIDT1 protein protein. 245 2e-64
AK000181-1|BAA90994.1| 827|Homo sapiens protein ( Homo sapiens ... 245 2e-64
BC114522-1|AAI14523.1| 829|Homo sapiens SIDT2 protein protein. 235 2e-61
AY358442-1|AAQ88807.1| 832|Homo sapiens multi-transmembrane dom... 235 2e-61
AK075137-1|BAC11427.1| 431|Homo sapiens protein ( Homo sapiens ... 235 2e-61
AF151799-1|AAD34036.1| 845|Homo sapiens CGI-40 protein protein. 219 9e-57
AK075471-1|BAC11641.1| 242|Homo sapiens protein ( Homo sapiens ... 159 2e-38
BC114959-1|AAI14960.1| 186|Homo sapiens SIDT2 protein protein. 128 4e-29
U07806-1|AAB60380.1| 761|Homo sapiens DNA topoisomerase I protein. 34 0.81
U07804-1|AAB60379.1| 761|Homo sapiens DNA topoisomerase I protein. 34 0.81
M60706-1|AAA61206.1| 765|Homo sapiens topoisomerase I protein. 34 0.81
J03250-1|AAA61207.1| 765|Homo sapiens TOP1 protein. 34 0.81
BC067349-1|AAH67349.1| 165|Homo sapiens TOP1 protein protein. 34 0.81
BC004475-1|AAH04475.1| 164|Homo sapiens TOP1 protein protein. 34 0.81
AL035652-1|CAI19767.1| 765|Homo sapiens topoisomerase (DNA) I p... 34 0.81
AL022394-1|CAI42886.1| 765|Homo sapiens topoisomerase (DNA) I p... 34 0.81
AK098749-1|BAC05403.1| 141|Homo sapiens protein ( Homo sapiens ... 33 1.1
U64822-1|AAB63354.1| 373|Homo sapiens josephin MJD1 protein. 33 1.9
AB209309-1|BAD92546.1| 155|Homo sapiens ataxin 3 isoform 1 vari... 33 1.9
U80745-1|AAB91443.1| 349|Homo sapiens CTG7a protein. 32 3.3
AF056191-1|AAC12944.1| 579|Homo sapiens TPA inducible protein p... 32 3.3
CR456537-1|CAG30423.1| 674|Homo sapiens PCQAP protein. 31 7.6
BC013985-1|AAH13985.1| 748|Homo sapiens PC2 (positive cofactor ... 31 7.6
BC003078-1|AAH03078.1| 767|Homo sapiens PCQAP protein protein. 31 7.6
AY950679-1|AAY34147.1| 659|Homo sapiens MEX3C protein. 31 7.6
AK090465-1|BAC03446.1| 811|Homo sapiens FLJ00386 protein protein. 31 7.6
BC112351-1|AAI12352.1| 725|Homo sapiens INVS protein protein. 30 10.0
BC111761-1|AAI11762.1| 1065|Homo sapiens inversin, isoform a pro... 30 10.0
AL445214-4|CAI39744.1| 1065|Homo sapiens inversin protein. 30 10.0
AL445214-3|CAI39745.2| 895|Homo sapiens inversin protein. 30 10.0
AL356798-2|CAI40807.1| 1065|Homo sapiens inversin protein. 30 10.0
AL356798-1|CAI40808.2| 895|Homo sapiens inversin protein. 30 10.0
AL137724-1|CAB70894.1| 439|Homo sapiens hypothetical protein pr... 30 10.0
AL137072-3|CAH72173.1| 1065|Homo sapiens inversin protein. 30 10.0
AL137072-2|CAM16212.1| 895|Homo sapiens inversin protein. 30 10.0
AJ011414-1|CAB56221.1| 729|Homo sapiens plexin-B1/SEP receptor ... 30 10.0
AF084382-2|AAC79457.1| 895|Homo sapiens inversin protein altern... 30 10.0
AF084382-1|AAC79456.1| 1065|Homo sapiens inversin protein protein. 30 10.0
AF084367-1|AAC79436.1| 1065|Homo sapiens inversin protein protein. 30 10.0
AF039217-1|AAD02131.2| 1013|Homo sapiens inv candidate homolog p... 30 10.0
AC078834-1|AAS01989.1| 439|Homo sapiens unknown protein. 30 10.0
>BC117222-1|AAI17223.1| 832|Homo sapiens SIDT1 protein protein.
Length = 832
Score = 245 bits (599), Expect = 2e-64
Identities = 119/295 (40%), Positives = 167/295 (56%), Gaps = 14/295 (4%)
Frame = -1
Query: 852 EYGIPAHYGLLSSLGAAMMVVALLSASYHVCPNSLNFQFDTAFMYVLAVLCMVKIYQSRH 673
EYGIP H+GL ++G A+M+ +LSA YHVCPN NFQFDT+FMY++A LCM+K+YQ+RH
Sbjct: 535 EYGIPKHFGLFYAMGIALMMEGVLSACYHVCPNYSNFQFDTSFMYMIAGLCMLKLYQTRH 594
Query: 672 PDINARAHATFGVLAVFIAXXXXXXXXXXXL--FWXXXXXXXXXXXXXXXLRIYYVGQFR 499
PDINA A++ + AV I FW +IYY+G+F+
Sbjct: 595 PDINASAYSAYASFAVVIMVTVLGVVFGKNDVWFWVIFSAIHVLASLALSTQIYYMGRFK 654
Query: 498 LEKSS--LAVAARGLR----------ARPLYTPRLVMLLIANAANWGFAIYGLLTHAGDI 355
++ S L + R +RPLY R+V+L++ N NW FA++GL+ D
Sbjct: 655 IDVSDTDLGIFRRAAMVFYTDCIQQCSRPLYMDRMVLLVVGNLVNWSFALFGLIYRPRDF 714
Query: 354 ATHXXXXXXXXXXLYIVFYVLMKLLHGERIRWYSWCFLXXXXACWVPALYFFTSGSTDWS 175
A++ LY+ FY++MKL E++ + W ALYFF + W
Sbjct: 715 ASYMLGIFICNLLLYLAFYIIMKLRSSEKVLPVPLFCIVATAVMWAAALYFFFQNLSSWE 774
Query: 174 ATPARSRHRNHECRVLQFYDSHDLWHMLSAAALYFTFNVMLTWDDGLSAVKRTEI 10
TPA SR +N EC +L F+D HD+WH LSA AL+F+F V+LT DD L V+R +I
Sbjct: 775 GTPAESREKNRECILLDFFDDHDIWHFLSATALFFSFLVLLTLDDDLDVVRRDQI 829
>AK000181-1|BAA90994.1| 827|Homo sapiens protein ( Homo sapiens cDNA
FLJ20174 fis, clone COL09863. ).
Length = 827
Score = 245 bits (599), Expect = 2e-64
Identities = 117/290 (40%), Positives = 165/290 (56%), Gaps = 9/290 (3%)
Frame = -1
Query: 852 EYGIPAHYGLLSSLGAAMMVVALLSASYHVCPNSLNFQFDTAFMYVLAVLCMVKIYQSRH 673
EYGIP H+GL ++G A+M+ +LSA YHVCPN NF+FDT+FMY++A LCM+K+YQ+RH
Sbjct: 535 EYGIPKHFGLFYAMGIALMMEGVLSACYHVCPNYSNFRFDTSFMYMIAGLCMLKLYQTRH 594
Query: 672 PDINARAHATFGVLAVFIAXXXXXXXXXXXL--FWXXXXXXXXXXXXXXXLRIYYVGQFR 499
PDINA A++ + AV I FW +IYY+G+F+
Sbjct: 595 PDINASAYSAYASFAVVIMVTVLGVVFGKNDVWFWVIFSAIHVLASLALSTQIYYMGRFK 654
Query: 498 LEKSSLAVAARGLR-------ARPLYTPRLVMLLIANAANWGFAIYGLLTHAGDIATHXX 340
++ AA +RPLY R+V+L++ N NW FA++GL+ D A++
Sbjct: 655 IDLGIFRRAAMVFYTDCIQQCSRPLYMDRMVLLVVGNLVNWSFALFGLIYRPRDFASYML 714
Query: 339 XXXXXXXXLYIVFYVLMKLLHGERIRWYSWCFLXXXXACWVPALYFFTSGSTDWSATPAR 160
LY+ FY++MKL E++ + W ALYFF + W TPA
Sbjct: 715 GIFICNLLLYLAFYIIMKLRSSEKVLPVPLFCIVATAVMWAAALYFFFQNLSSWEGTPAE 774
Query: 159 SRHRNHECRVLQFYDSHDLWHMLSAAALYFTFNVMLTWDDGLSAVKRTEI 10
SR +N EC +L F+D HD+WH LSA AL+F+F V+LT DD L V+R +I
Sbjct: 775 SREKNRECILLDFFDDHDIWHFLSATALFFSFLVLLTLDDDLDVVRRDQI 824
>BC114522-1|AAI14523.1| 829|Homo sapiens SIDT2 protein protein.
Length = 829
Score = 235 bits (574), Expect = 2e-61
Identities = 114/290 (39%), Positives = 161/290 (55%), Gaps = 9/290 (3%)
Frame = -1
Query: 852 EYGIPAHYGLLSSLGAAMMVVALLSASYHVCPNSLNFQFDTAFMYVLAVLCMVKIYQSRH 673
E GIP H+GL ++G A+M+ LLSA YHVCPN NFQFDT+FMY++A LCM+K+YQ RH
Sbjct: 537 ECGIPKHFGLFYAMGTALMMEGLLSACYHVCPNYTNFQFDTSFMYMIAGLCMLKLYQKRH 596
Query: 672 PDINARAHATFGVLAV--FIAXXXXXXXXXXXLFWXXXXXXXXXXXXXXXLRIYYVGQFR 499
PDINA A++ + LA+ F + FW ++YY+G+++
Sbjct: 597 PDINASAYSAYACLAIVIFFSVLGVVFGKGNTAFWIVFSIIHIIATLLLSTQLYYMGRWK 656
Query: 498 LEKSSLAVAARGLR-------ARPLYTPRLVMLLIANAANWGFAIYGLLTHAGDIATHXX 340
L+ L + PLY R+V+L++ N NW A YGL+ D A++
Sbjct: 657 LDSGIFRRILHVLYTDCIRQCSGPLYVDRMVLLVMGNVINWSLAAYGLIMRPNDFASYLL 716
Query: 339 XXXXXXXXLYIVFYVLMKLLHGERIRWYSWCFLXXXXACWVPALYFFTSGSTDWSATPAR 160
LY FY++MKL GERI+ + W AL+FF G + W TPA
Sbjct: 717 AIGICNLLLYFAFYIIMKLRSGERIKLIPLLCIVCTSVVWGFALFFFFQGLSTWQKTPAE 776
Query: 159 SRHRNHECRVLQFYDSHDLWHMLSAAALYFTFNVMLTWDDGLSAVKRTEI 10
SR N +C +L F+D HD+WH LS+ A++ +F V+LT DD L V+R +I
Sbjct: 777 SREHNRDCILLDFFDDHDIWHFLSSIAMFGSFLVLLTLDDDLDTVQRDKI 826
>AY358442-1|AAQ88807.1| 832|Homo sapiens multi-transmembrane domain
immunoglobulin-like protein protein.
Length = 832
Score = 235 bits (574), Expect = 2e-61
Identities = 114/290 (39%), Positives = 161/290 (55%), Gaps = 9/290 (3%)
Frame = -1
Query: 852 EYGIPAHYGLLSSLGAAMMVVALLSASYHVCPNSLNFQFDTAFMYVLAVLCMVKIYQSRH 673
E GIP H+GL ++G A+M+ LLSA YHVCPN NFQFDT+FMY++A LCM+K+YQ RH
Sbjct: 540 ECGIPKHFGLFYAMGTALMMEGLLSACYHVCPNYTNFQFDTSFMYMIAGLCMLKLYQKRH 599
Query: 672 PDINARAHATFGVLAV--FIAXXXXXXXXXXXLFWXXXXXXXXXXXXXXXLRIYYVGQFR 499
PDINA A++ + LA+ F + FW ++YY+G+++
Sbjct: 600 PDINASAYSAYACLAIVIFFSVLGVVFGKGNTAFWIVFSIIHIIATLLLSTQLYYMGRWK 659
Query: 498 LEKSSLAVAARGLR-------ARPLYTPRLVMLLIANAANWGFAIYGLLTHAGDIATHXX 340
L+ L + PLY R+V+L++ N NW A YGL+ D A++
Sbjct: 660 LDSGIFRRILHVLYTDCIRQCSGPLYVDRMVLLVMGNVINWSLAAYGLIMRPNDFASYLL 719
Query: 339 XXXXXXXXLYIVFYVLMKLLHGERIRWYSWCFLXXXXACWVPALYFFTSGSTDWSATPAR 160
LY FY++MKL GERI+ + W AL+FF G + W TPA
Sbjct: 720 AIGICNLLLYFAFYIIMKLRSGERIKLIPLLCIVCTSVVWGFALFFFFQGLSTWQKTPAE 779
Query: 159 SRHRNHECRVLQFYDSHDLWHMLSAAALYFTFNVMLTWDDGLSAVKRTEI 10
SR N +C +L F+D HD+WH LS+ A++ +F V+LT DD L V+R +I
Sbjct: 780 SREHNRDCILLDFFDDHDIWHFLSSIAMFGSFLVLLTLDDDLDTVQRDKI 829
>AK075137-1|BAC11427.1| 431|Homo sapiens protein ( Homo sapiens cDNA
FLJ90656 fis, clone PLACE1004637. ).
Length = 431
Score = 235 bits (574), Expect = 2e-61
Identities = 114/290 (39%), Positives = 161/290 (55%), Gaps = 9/290 (3%)
Frame = -1
Query: 852 EYGIPAHYGLLSSLGAAMMVVALLSASYHVCPNSLNFQFDTAFMYVLAVLCMVKIYQSRH 673
E GIP H+GL ++G A+M+ LLSA YHVCPN NFQFDT+FMY++A LCM+K+YQ RH
Sbjct: 139 ECGIPKHFGLFYAMGTALMMEGLLSACYHVCPNYTNFQFDTSFMYMIAGLCMLKLYQKRH 198
Query: 672 PDINARAHATFGVLAV--FIAXXXXXXXXXXXLFWXXXXXXXXXXXXXXXLRIYYVGQFR 499
PDINA A++ + LA+ F + FW ++YY+G+++
Sbjct: 199 PDINASAYSAYACLAIVIFFSVLGVVFGKGNTAFWIVFSIIHIIATLLLSTQLYYMGRWK 258
Query: 498 LEKSSLAVAARGLR-------ARPLYTPRLVMLLIANAANWGFAIYGLLTHAGDIATHXX 340
L+ L + PLY R+V+L++ N NW A YGL+ D A++
Sbjct: 259 LDSGIFRRILHVLYTDCIRQCSGPLYVDRMVLLVMGNVINWSLAAYGLIMRPNDFASYLL 318
Query: 339 XXXXXXXXLYIVFYVLMKLLHGERIRWYSWCFLXXXXACWVPALYFFTSGSTDWSATPAR 160
LY FY++MKL GERI+ + W AL+FF G + W TPA
Sbjct: 319 AIGICNLLLYFAFYIIMKLRSGERIKLIPLLCIVCTSVVWGFALFFFFQGLSTWQKTPAE 378
Query: 159 SRHRNHECRVLQFYDSHDLWHMLSAAALYFTFNVMLTWDDGLSAVKRTEI 10
SR N +C +L F+D HD+WH LS+ A++ +F V+LT DD L V+R +I
Sbjct: 379 SREHNRDCILLDFFDDHDIWHFLSSIAMFGSFLVLLTLDDDLDTVQRDKI 428
>AF151799-1|AAD34036.1| 845|Homo sapiens CGI-40 protein protein.
Length = 845
Score = 219 bits (536), Expect = 9e-57
Identities = 106/274 (38%), Positives = 150/274 (54%), Gaps = 9/274 (3%)
Frame = -1
Query: 852 EYGIPAHYGLLSSLGAAMMVVALLSASYHVCPNSLNFQFDTAFMYVLAVLCMVKIYQSRH 673
E GIP H+GL ++G A+M+ LLSA YHVCPN NFQFDT+FMY++A LCM+K+YQ RH
Sbjct: 561 ECGIPKHFGLFYAMGTALMMEGLLSACYHVCPNYTNFQFDTSFMYMIAGLCMLKLYQKRH 620
Query: 672 PDINARAHATFGVLAV--FIAXXXXXXXXXXXLFWXXXXXXXXXXXXXXXLRIYYVGQFR 499
PDINA A++ + LA+ F + FW ++YY+G+++
Sbjct: 621 PDINASAYSAYACLAIVIFFSVLGVVFGKGNTAFWIVFSIIHIIATLLLSTQLYYMGRWK 680
Query: 498 LEKSSLAVAARGLR-------ARPLYTPRLVMLLIANAANWGFAIYGLLTHAGDIATHXX 340
L+ L + PLY R+V+L++ N NW A YGL+ D A++
Sbjct: 681 LDSGIFRRILHVLYTDCIRQCSGPLYVDRMVLLVMGNVINWSLAAYGLIMRPNDFASYLL 740
Query: 339 XXXXXXXXLYIVFYVLMKLLHGERIRWYSWCFLXXXXACWVPALYFFTSGSTDWSATPAR 160
LY FY++MKL GERI+ + W AL+FF G + W TPA
Sbjct: 741 AIGICNLLLYFAFYIIMKLRSGERIKLIPLLCIVCTSVVWGFALFFFFQGLSTWQKTPAE 800
Query: 159 SRHRNHECRVLQFYDSHDLWHMLSAAALYFTFNV 58
SR N +C +L F+D HD+WH LS+ A++ +F V
Sbjct: 801 SREHNRDCILLDFFDDHDIWHFLSSIAMFGSFLV 834
>AK075471-1|BAC11641.1| 242|Homo sapiens protein ( Homo sapiens
cDNA PSEC0165 fis, clone PLACE1010978. ).
Length = 242
Score = 159 bits (385), Expect = 2e-38
Identities = 80/239 (33%), Positives = 121/239 (50%), Gaps = 9/239 (3%)
Frame = -1
Query: 699 MVKIYQSRHPDINARAHATFGVLAV--FIAXXXXXXXXXXXLFWXXXXXXXXXXXXXXXL 526
M+K+Y+ RHPDINA A++ + LA+ F + FW
Sbjct: 1 MLKLYRKRHPDINASAYSAYACLAIVIFFSVLGVVFGKGNTAFWIVFSIIHIIATLLLST 60
Query: 525 RIYYVGQFRLEKSSLAVAARGLR-------ARPLYTPRLVMLLIANAANWGFAIYGLLTH 367
++YY+G+++L+ L + PLY R+V+L++ N NW A YGL+
Sbjct: 61 QLYYMGRWKLDSGIFRRILHVLYTDCIRQCSGPLYVDRMVLLVMGNVINWSLAAYGLIMR 120
Query: 366 AGDIATHXXXXXXXXXXLYIVFYVLMKLLHGERIRWYSWCFLXXXXACWVPALYFFTSGS 187
D A++ LY FY++MKL GERI+ + W AL+FF G
Sbjct: 121 PNDFASYLLAIGICNLLLYFAFYIIMKLRSGERIKLIPLLCIVCTSVVWGFALFFFFQGL 180
Query: 186 TDWSATPARSRHRNHECRVLQFYDSHDLWHMLSAAALYFTFNVMLTWDDGLSAVKRTEI 10
+ W TPA SR N +C +L F++ HD+WH LS+ A++ +F V+LT DD L V+R +I
Sbjct: 181 STWQKTPAESREHNRDCILLDFFNDHDIWHFLSSIAMFGSFLVLLTLDDDLDTVQRDKI 239
>BC114959-1|AAI14960.1| 186|Homo sapiens SIDT2 protein protein.
Length = 186
Score = 128 bits (308), Expect = 4e-29
Identities = 58/145 (40%), Positives = 82/145 (56%)
Frame = -1
Query: 444 YTPRLVMLLIANAANWGFAIYGLLTHAGDIATHXXXXXXXXXXLYIVFYVLMKLLHGERI 265
Y R+V+L++ N NW A YGL+ D A++ LY FY++MKL GERI
Sbjct: 39 YVDRMVLLVMGNVINWSLAAYGLIMRPNDFASYLLAIGICNLLLYFAFYIIMKLRSGERI 98
Query: 264 RWYSWCFLXXXXACWVPALYFFTSGSTDWSATPARSRHRNHECRVLQFYDSHDLWHMLSA 85
+ + W AL+FF G + W TPA SR N +C +L F+D HD+WH LS+
Sbjct: 99 KLIPLLCIVCTSVVWGFALFFFFQGLSTWQKTPAESREHNRDCILLDFFDDHDIWHFLSS 158
Query: 84 AALYFTFNVMLTWDDGLSAVKRTEI 10
A++ +F V+LT DD L V+R +I
Sbjct: 159 IAMFGSFLVLLTLDDDLDTVQRDKI 183
>U07806-1|AAB60380.1| 761|Homo sapiens DNA topoisomerase I protein.
Length = 761
Score = 33.9 bits (74), Expect = 0.81
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +1
Query: 502 KLSDVVDAQGQQQEREHMQHSEHAPEQ-RPPAQHAPHHERDEDGEHPEGGVRPRVDVGVS 678
+L+D + + ++REH +H EH E+ R ++H+ +D + +H E D G S
Sbjct: 13 RLNDSHKHKDKHKDREH-RHKEHKKEKDREKSKHSNSEHKDSEKKHKEKEKTKHKD-GSS 70
Query: 679 RLVDLHHAQHRQHVHEGRVELEVEAVG 759
+ H +H+ E R E +V A G
Sbjct: 71 ---EKHKDKHKDRDKEKRKEEKVRASG 94
>U07804-1|AAB60379.1| 761|Homo sapiens DNA topoisomerase I protein.
Length = 761
Score = 33.9 bits (74), Expect = 0.81
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +1
Query: 502 KLSDVVDAQGQQQEREHMQHSEHAPEQ-RPPAQHAPHHERDEDGEHPEGGVRPRVDVGVS 678
+L+D + + ++REH +H EH E+ R ++H+ +D + +H E D G S
Sbjct: 13 RLNDSHKHKDKHKDREH-RHKEHKKEKDREKSKHSNSEHKDSEKKHKEKEKTKHKD-GSS 70
Query: 679 RLVDLHHAQHRQHVHEGRVELEVEAVG 759
+ H +H+ E R E +V A G
Sbjct: 71 ---EKHKDKHKDRDKEKRKEEKVRASG 94
>M60706-1|AAA61206.1| 765|Homo sapiens topoisomerase I protein.
Length = 765
Score = 33.9 bits (74), Expect = 0.81
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +1
Query: 502 KLSDVVDAQGQQQEREHMQHSEHAPEQ-RPPAQHAPHHERDEDGEHPEGGVRPRVDVGVS 678
+L+D + + ++REH +H EH E+ R ++H+ +D + +H E D G S
Sbjct: 17 RLNDSHKHKDKHKDREH-RHKEHKKEKDREKSKHSNSEHKDSEKKHKEKEKTKHKD-GSS 74
Query: 679 RLVDLHHAQHRQHVHEGRVELEVEAVG 759
+ H +H+ E R E +V A G
Sbjct: 75 ---EKHKDKHKDRDKEKRKEEKVRASG 98
>J03250-1|AAA61207.1| 765|Homo sapiens TOP1 protein.
Length = 765
Score = 33.9 bits (74), Expect = 0.81
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +1
Query: 502 KLSDVVDAQGQQQEREHMQHSEHAPEQ-RPPAQHAPHHERDEDGEHPEGGVRPRVDVGVS 678
+L+D + + ++REH +H EH E+ R ++H+ +D + +H E D G S
Sbjct: 17 RLNDSHKHKDKHKDREH-RHKEHKKEKDREKSKHSNSEHKDSEKKHKEKEKTKHKD-GSS 74
Query: 679 RLVDLHHAQHRQHVHEGRVELEVEAVG 759
+ H +H+ E R E +V A G
Sbjct: 75 ---EKHKDKHKDRDKEKRKEEKVRASG 98
>BC067349-1|AAH67349.1| 165|Homo sapiens TOP1 protein protein.
Length = 165
Score = 33.9 bits (74), Expect = 0.81
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +1
Query: 502 KLSDVVDAQGQQQEREHMQHSEHAPEQ-RPPAQHAPHHERDEDGEHPEGGVRPRVDVGVS 678
+L+D + + ++REH +H EH E+ R ++H+ +D + +H E D G S
Sbjct: 17 RLNDSHKHKDKHKDREH-RHKEHKKEKDREKSKHSNSEHKDSEKKHKEKEKTKHKD-GSS 74
Query: 679 RLVDLHHAQHRQHVHEGRVELEVEAVG 759
+ H +H+ E R E +V A G
Sbjct: 75 ---EKHKDKHKDRDKEKRKEEKVRASG 98
>BC004475-1|AAH04475.1| 164|Homo sapiens TOP1 protein protein.
Length = 164
Score = 33.9 bits (74), Expect = 0.81
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +1
Query: 502 KLSDVVDAQGQQQEREHMQHSEHAPEQ-RPPAQHAPHHERDEDGEHPEGGVRPRVDVGVS 678
+L+D + + ++REH +H EH E+ R ++H+ +D + +H E D G S
Sbjct: 17 RLNDSHKHKDKHKDREH-RHKEHKKEKDREKSKHSNSEHKDSEKKHKEKEKTKHKD-GSS 74
Query: 679 RLVDLHHAQHRQHVHEGRVELEVEAVG 759
+ H +H+ E R E +V A G
Sbjct: 75 ---EKHKDKHKDRDKEKRKEEKVRASG 98
>AL035652-1|CAI19767.1| 765|Homo sapiens topoisomerase (DNA) I
protein.
Length = 765
Score = 33.9 bits (74), Expect = 0.81
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +1
Query: 502 KLSDVVDAQGQQQEREHMQHSEHAPEQ-RPPAQHAPHHERDEDGEHPEGGVRPRVDVGVS 678
+L+D + + ++REH +H EH E+ R ++H+ +D + +H E D G S
Sbjct: 17 RLNDSHKHKDKHKDREH-RHKEHKKEKDREKSKHSNSEHKDSEKKHKEKEKTKHKD-GSS 74
Query: 679 RLVDLHHAQHRQHVHEGRVELEVEAVG 759
+ H +H+ E R E +V A G
Sbjct: 75 ---EKHKDKHKDRDKEKRKEEKVRASG 98
>AL022394-1|CAI42886.1| 765|Homo sapiens topoisomerase (DNA) I
protein.
Length = 765
Score = 33.9 bits (74), Expect = 0.81
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +1
Query: 502 KLSDVVDAQGQQQEREHMQHSEHAPEQ-RPPAQHAPHHERDEDGEHPEGGVRPRVDVGVS 678
+L+D + + ++REH +H EH E+ R ++H+ +D + +H E D G S
Sbjct: 17 RLNDSHKHKDKHKDREH-RHKEHKKEKDREKSKHSNSEHKDSEKKHKEKEKTKHKD-GSS 74
Query: 679 RLVDLHHAQHRQHVHEGRVELEVEAVG 759
+ H +H+ E R E +V A G
Sbjct: 75 ---EKHKDKHKDRDKEKRKEEKVRASG 98
>AK098749-1|BAC05403.1| 141|Homo sapiens protein ( Homo sapiens
cDNA FLJ25883 fis, clone CBR02735. ).
Length = 141
Score = 33.5 bits (73), Expect = 1.1
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 9/84 (10%)
Frame = -1
Query: 297 VLMKLLHGE---RIRWYSWC-FLXXXXACWVPALYFFT--SGSTDWSATPARSRHRNHEC 136
V +L H E R+ W C ++ W P F G +WSA P RSR + +
Sbjct: 57 VCRELAHKETWHRLSWLVACLWVHYDQGYWCPCCSFLPCGGGGREWSAIPRRSRCPSPDE 116
Query: 135 RVLQFY---DSHDLWHMLSAAALY 73
+L Y DS LW A A +
Sbjct: 117 AILYLYATWDSGSLWSSPPALAFF 140
>U64822-1|AAB63354.1| 373|Homo sapiens josephin MJD1 protein.
Length = 373
Score = 32.7 bits (71), Expect = 1.9
Identities = 19/85 (22%), Positives = 36/85 (42%)
Frame = +1
Query: 532 QQQEREHMQHSEHAPEQRPPAQHAPHHERDEDGEHPEGGVRPRVDVGVSRLVDLHHAQHR 711
+QQ+++ Q + +Q+ Q +RD G+ RP G DL A
Sbjct: 290 KQQQKQQQQQQQQQQQQQQQQQQQQQQQRDLSGQSSHPCERPATSSGALG-SDLGDAMSE 348
Query: 712 QHVHEGRVELEVEAVGTDVVAGGEQ 786
+ + + V + +E V D+ G++
Sbjct: 349 EDMLQAAVTMSLETVRNDLKTEGKK 373
>AB209309-1|BAD92546.1| 155|Homo sapiens ataxin 3 isoform 1 variant
protein.
Length = 155
Score = 32.7 bits (71), Expect = 1.9
Identities = 19/85 (22%), Positives = 36/85 (42%)
Frame = +1
Query: 532 QQQEREHMQHSEHAPEQRPPAQHAPHHERDEDGEHPEGGVRPRVDVGVSRLVDLHHAQHR 711
+QQ+++ Q + +Q+ Q +RD G+ RP G DL A
Sbjct: 72 KQQQKQQQQQQQQQQQQQQQQQQQQQQQRDLSGQSSHPCERPATSSGALG-SDLGDAMSE 130
Query: 712 QHVHEGRVELEVEAVGTDVVAGGEQ 786
+ + + V + +E V D+ G++
Sbjct: 131 EDMLQAAVTMSLETVRNDLKTEGKK 155
>U80745-1|AAB91443.1| 349|Homo sapiens CTG7a protein.
Length = 349
Score = 31.9 bits (69), Expect = 3.3
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +1
Query: 526 QGQQQEREHMQHSEHAPEQRPPAQHAPHHERDEDGEHPEGGVRPRVDVGVSRLVDLHHAQ 705
Q QQQ+++ Q + A E +PP Q P + + P P+ +L +HH Q
Sbjct: 64 QQQQQQQQQQQQQQQALEAQPPIQQPPM----QQPQPPPSQALPQ------QLQQMHHTQ 113
Query: 706 HRQ 714
H Q
Sbjct: 114 HHQ 116
>AF056191-1|AAC12944.1| 579|Homo sapiens TPA inducible protein
protein.
Length = 579
Score = 31.9 bits (69), Expect = 3.3
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +1
Query: 526 QGQQQEREHMQHSEHAPEQRPPAQHAPHHERDEDGEHPEGGVRPRVDVGVSRLVDLHHAQ 705
Q QQQ+++ Q + A E +PP Q P + + P P+ +L +HH Q
Sbjct: 222 QQQQQQQQQQQQQQQALEAQPPIQQPPM----QQPQPPPSQALPQ------QLQQMHHTQ 271
Query: 706 HRQ 714
H Q
Sbjct: 272 HHQ 274
>CR456537-1|CAG30423.1| 674|Homo sapiens PCQAP protein.
Length = 674
Score = 30.7 bits (66), Expect = 7.6
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 526 QGQQQEREHMQHSEHAPEQRPPAQHAPHHERDEDGEHPEGGVRPRVDVGVSRLVDLHHAQ 705
Q QQQ+++ Q + A + +PP Q P + + P P+ +L +HH Q
Sbjct: 174 QQQQQQQQQQQQQQQALQAQPPIQQPPM----QQPQPPPSQALPQ------QLQQMHHTQ 223
Query: 706 HRQ 714
H Q
Sbjct: 224 HHQ 226
>BC013985-1|AAH13985.1| 748|Homo sapiens PC2 (positive cofactor 2,
multiprotein complex) glutamine/Q-rich-associated pro
protein.
Length = 748
Score = 30.7 bits (66), Expect = 7.6
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 526 QGQQQEREHMQHSEHAPEQRPPAQHAPHHERDEDGEHPEGGVRPRVDVGVSRLVDLHHAQ 705
Q QQQ+++ Q + A + +PP Q P + + P P+ +L +HH Q
Sbjct: 248 QQQQQQQQQQQQQQQALQAQPPIQQPPM----QQPQPPPSQALPQ------QLQQMHHTQ 297
Query: 706 HRQ 714
H Q
Sbjct: 298 HHQ 300
>BC003078-1|AAH03078.1| 767|Homo sapiens PCQAP protein protein.
Length = 767
Score = 30.7 bits (66), Expect = 7.6
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 526 QGQQQEREHMQHSEHAPEQRPPAQHAPHHERDEDGEHPEGGVRPRVDVGVSRLVDLHHAQ 705
Q QQQ+++ Q + A + +PP Q P + + P P+ +L +HH Q
Sbjct: 267 QQQQQQQQQQQQQQQALQAQPPIQQPPM----QQPQPPPSQALPQ------QLQQMHHTQ 316
Query: 706 HRQ 714
H Q
Sbjct: 317 HHQ 319
>AY950679-1|AAY34147.1| 659|Homo sapiens MEX3C protein.
Length = 659
Score = 30.7 bits (66), Expect = 7.6
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +1
Query: 523 AQGQQQEREHMQHSEHAPEQRPPAQHAPHHERDEDGEHPE 642
AQGQ + + E AP RP A A E +ED E E
Sbjct: 77 AQGQARRAAELSPEERAPPGRPGAPEAAELELEEDEEEGE 116
>AK090465-1|BAC03446.1| 811|Homo sapiens FLJ00386 protein protein.
Length = 811
Score = 30.7 bits (66), Expect = 7.6
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 526 QGQQQEREHMQHSEHAPEQRPPAQHAPHHERDEDGEHPEGGVRPRVDVGVSRLVDLHHAQ 705
Q QQQ+++ Q + A + +PP Q P + + P P+ +L +HH Q
Sbjct: 271 QQQQQQQQQQQQQQQALQAQPPIQQPPM----QQPQPPPSQALPQ------QLQQMHHTQ 320
Query: 706 HRQ 714
H Q
Sbjct: 321 HHQ 323
>BC112351-1|AAI12352.1| 725|Homo sapiens INVS protein protein.
Length = 725
Score = 30.3 bits (65), Expect = 10.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2
Query: 899 AAAQEXETGSGRHDMRSTVSRRTTDCCRPWALP 801
AAA++ E + R + RR+ D CRP ALP
Sbjct: 592 AAAKKREEENKRKEAEQQKGRRSPDSCRPQALP 624
>BC111761-1|AAI11762.1| 1065|Homo sapiens inversin, isoform a
protein.
Length = 1065
Score = 30.3 bits (65), Expect = 10.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2
Query: 899 AAAQEXETGSGRHDMRSTVSRRTTDCCRPWALP 801
AAA++ E + R + RR+ D CRP ALP
Sbjct: 592 AAAKKREEENKRKEAEQQKGRRSPDSCRPQALP 624
>AL445214-4|CAI39744.1| 1065|Homo sapiens inversin protein.
Length = 1065
Score = 30.3 bits (65), Expect = 10.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2
Query: 899 AAAQEXETGSGRHDMRSTVSRRTTDCCRPWALP 801
AAA++ E + R + RR+ D CRP ALP
Sbjct: 592 AAAKKREEENKRKEAEQQKGRRSPDSCRPQALP 624
>AL445214-3|CAI39745.2| 895|Homo sapiens inversin protein.
Length = 895
Score = 30.3 bits (65), Expect = 10.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2
Query: 899 AAAQEXETGSGRHDMRSTVSRRTTDCCRPWALP 801
AAA++ E + R + RR+ D CRP ALP
Sbjct: 592 AAAKKREEENKRKEAEQQKGRRSPDSCRPQALP 624
>AL356798-2|CAI40807.1| 1065|Homo sapiens inversin protein.
Length = 1065
Score = 30.3 bits (65), Expect = 10.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2
Query: 899 AAAQEXETGSGRHDMRSTVSRRTTDCCRPWALP 801
AAA++ E + R + RR+ D CRP ALP
Sbjct: 592 AAAKKREEENKRKEAEQQKGRRSPDSCRPQALP 624
>AL356798-1|CAI40808.2| 895|Homo sapiens inversin protein.
Length = 895
Score = 30.3 bits (65), Expect = 10.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2
Query: 899 AAAQEXETGSGRHDMRSTVSRRTTDCCRPWALP 801
AAA++ E + R + RR+ D CRP ALP
Sbjct: 592 AAAKKREEENKRKEAEQQKGRRSPDSCRPQALP 624
>AL137724-1|CAB70894.1| 439|Homo sapiens hypothetical protein
protein.
Length = 439
Score = 30.3 bits (65), Expect = 10.0
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 3/66 (4%)
Frame = +1
Query: 532 QQQEREHMQHSE-HAPEQRPPAQH--APHHERDEDGEHPEGGVRPRVDVGVSRLVDLHHA 702
Q Q++ QH H P +PP QH P H +H + V L+ +
Sbjct: 40 QPQQQPPPQHQPPHQPPHQPPPQHQPPPQHPPQHPPQHQHHHHHHHLSVPPPPLMPMSQP 99
Query: 703 QHRQHV 720
Q R HV
Sbjct: 100 QFRPHV 105
>AL137072-3|CAH72173.1| 1065|Homo sapiens inversin protein.
Length = 1065
Score = 30.3 bits (65), Expect = 10.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2
Query: 899 AAAQEXETGSGRHDMRSTVSRRTTDCCRPWALP 801
AAA++ E + R + RR+ D CRP ALP
Sbjct: 592 AAAKKREEENKRKEAEQQKGRRSPDSCRPQALP 624
>AL137072-2|CAM16212.1| 895|Homo sapiens inversin protein.
Length = 895
Score = 30.3 bits (65), Expect = 10.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2
Query: 899 AAAQEXETGSGRHDMRSTVSRRTTDCCRPWALP 801
AAA++ E + R + RR+ D CRP ALP
Sbjct: 592 AAAKKREEENKRKEAEQQKGRRSPDSCRPQALP 624
>AJ011414-1|CAB56221.1| 729|Homo sapiens plexin-B1/SEP receptor
protein.
Length = 729
Score = 30.3 bits (65), Expect = 10.0
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Frame = +3
Query: 780 RAAPPPSWQRPGTTAVRSAPG----YRTPHVVAPASCFRFLR 893
RA PPPS RP +T + PG R P APA +R R
Sbjct: 685 RALPPPSSSRPASTTSMTPPGSGSWKRRPWGQAPAPVWRAFR 726
>AF084382-2|AAC79457.1| 895|Homo sapiens inversin protein
alternative isoform protein.
Length = 895
Score = 30.3 bits (65), Expect = 10.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2
Query: 899 AAAQEXETGSGRHDMRSTVSRRTTDCCRPWALP 801
AAA++ E + R + RR+ D CRP ALP
Sbjct: 592 AAAKKREEENKRKEAEQQKGRRSPDSCRPQALP 624
>AF084382-1|AAC79456.1| 1065|Homo sapiens inversin protein protein.
Length = 1065
Score = 30.3 bits (65), Expect = 10.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2
Query: 899 AAAQEXETGSGRHDMRSTVSRRTTDCCRPWALP 801
AAA++ E + R + RR+ D CRP ALP
Sbjct: 592 AAAKKREEENKRKEAEQQKGRRSPDSCRPQALP 624
>AF084367-1|AAC79436.1| 1065|Homo sapiens inversin protein protein.
Length = 1065
Score = 30.3 bits (65), Expect = 10.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2
Query: 899 AAAQEXETGSGRHDMRSTVSRRTTDCCRPWALP 801
AAA++ E + R + RR+ D CRP ALP
Sbjct: 592 AAAKKREEENKRKEAEQQKGRRSPDSCRPQALP 624
>AF039217-1|AAD02131.2| 1013|Homo sapiens inv candidate homolog
protein.
Length = 1013
Score = 30.3 bits (65), Expect = 10.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2
Query: 899 AAAQEXETGSGRHDMRSTVSRRTTDCCRPWALP 801
AAA++ E + R + RR+ D CRP ALP
Sbjct: 540 AAAKKREEENKRKEAEQQKGRRSPDSCRPQALP 572
>AC078834-1|AAS01989.1| 439|Homo sapiens unknown protein.
Length = 439
Score = 30.3 bits (65), Expect = 10.0
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 3/66 (4%)
Frame = +1
Query: 532 QQQEREHMQHSE-HAPEQRPPAQH--APHHERDEDGEHPEGGVRPRVDVGVSRLVDLHHA 702
Q Q++ QH H P +PP QH P H +H + V L+ +
Sbjct: 40 QPQQQPPPQHQPPHQPPHQPPPQHQPPPQHPPQHPPQHQHHHHHHHLSVPPPPLMPMSQP 99
Query: 703 QHRQHV 720
Q R HV
Sbjct: 100 QFRPHV 105
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.316 0.135 0.415
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,822,102
Number of Sequences: 237096
Number of extensions: 1831309
Number of successful extensions: 11921
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 10570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11731
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11659288620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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