Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16c22r
         (903 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                26   0.41 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    26   0.54 
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    25   0.94 
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    25   0.94 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.94 
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   6.7  
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    22   6.7  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   8.8  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 26.2 bits (55), Expect = 0.41
 Identities = 15/50 (30%), Positives = 19/50 (38%)
 Frame = +1

Query: 574 PEQRPPAQHAPHHERDEDGEHPEGGVRPRVDVGVSRLVDLHHAQHRQHVH 723
           P Q  P+Q+ PH  R     H  G       +G       H  Q  QH+H
Sbjct: 318 PHQHHPSQYHPH--RGSSPHHQHGNHTMGPTMGPPHHHHHHQTQSLQHLH 365



 Score = 25.0 bits (52), Expect = 0.94
 Identities = 16/57 (28%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
 Frame = +1

Query: 550 HMQHSEH--APEQRPPAQHAPHHERDEDGEHPEGGVRPRVDVGVSRLVDLHHAQHRQ 714
           H QH  H   P   PP  H  HH + +  +H      P +    S  V+  +A   Q
Sbjct: 335 HHQHGNHTMGPTMGPPHHH--HHHQTQSLQHLHYRQPPTLSESYSSYVNSMYASGAQ 389



 Score = 24.2 bits (50), Expect = 1.6
 Identities = 15/56 (26%), Positives = 18/56 (32%)
 Frame = +1

Query: 697 HAQHRQHVHEGRVELEVEAVGTDVVAGGEQRHHHHGSAQGRQQSVVRRDTVLLMSW 864
           H   + H H G          T     G   HHHH   Q  Q    R+   L  S+
Sbjct: 321 HHPSQYHPHRGSSPHHQHGNHTMGPTMGPPHHHHHHQTQSLQHLHYRQPPTLSESY 376


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 25.8 bits (54), Expect = 0.54
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +1

Query: 514 VVDAQG-QQQEREHMQHSEHAPEQRPPAQHAPHHE 615
           V++AQ  QQQ+++  Q  +   +Q+   QH P  E
Sbjct: 434 VINAQQPQQQQQQQQQQQQQQQQQQQQQQHWPMEE 468



 Score = 25.8 bits (54), Expect = 0.54
 Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
 Frame = +1

Query: 526 QGQQQEREHMQHSEHAPEQRPPAQ---HAPHHERDEDGEHPEGGVRPRVDV---GVSRLV 687
           Q QQQ+++  Q  +H P +  PA     A     DE  + P G V          V+ L 
Sbjct: 449 QQQQQQQQQQQQQQHWPMEEEPAASWGSASDVTLDEAVKSPLGSVSSTESTCSGEVASLT 508

Query: 688 DLHH 699
           + HH
Sbjct: 509 EYHH 512


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 25.0 bits (52), Expect = 0.94
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -1

Query: 729 AFMYVLAVLCMVKIYQSRHPD 667
           AF+Y LA+LC+  I+ +  PD
Sbjct: 8   AFIYSLALLCLHAIFVNAAPD 28


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 25.0 bits (52), Expect = 0.94
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -1

Query: 729 AFMYVLAVLCMVKIYQSRHPD 667
           AF+Y LA+LC+  I+ +  PD
Sbjct: 8   AFIYSLALLCLHAIFVNAAPD 28


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.0 bits (52), Expect = 0.94
 Identities = 9/39 (23%), Positives = 20/39 (51%)
 Frame = +1

Query: 526  QGQQQEREHMQHSEHAPEQRPPAQHAPHHERDEDGEHPE 642
            Q QQQ+++  Q S+   +Q+P  Q     ++ +  +  +
Sbjct: 1509 QQQQQQQQPQQQSQQPQQQQPQPQQQQQQQQQQQPQQQQ 1547



 Score = 23.4 bits (48), Expect = 2.9
 Identities = 11/46 (23%), Positives = 22/46 (47%)
 Frame = +1

Query: 493  LETKLSDVVDAQGQQQEREHMQHSEHAPEQRPPAQHAPHHERDEDG 630
            L+ +  +    Q QQQ+++  Q  +   +Q+   Q   H  R+ +G
Sbjct: 1198 LQEQQRNAAMVQQQQQQQQQQQQQQQ--QQQQQQQQQQHQAREREG 1241



 Score = 23.0 bits (47), Expect = 3.8
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +1

Query: 490  LLETKLSDVVDAQGQQQEREHMQHSEHAPEQRPPAQH 600
            L E + +  +  Q QQQ+++  Q  +   +Q+   QH
Sbjct: 1198 LQEQQRNAAMVQQQQQQQQQQQQQQQQQQQQQQQQQH 1234



 Score = 23.0 bits (47), Expect = 3.8
 Identities = 8/33 (24%), Positives = 16/33 (48%)
 Frame = +1

Query: 526  QGQQQEREHMQHSEHAPEQRPPAQHAPHHERDE 624
            Q QQQ+++  Q     P+Q+ P       ++ +
Sbjct: 1508 QQQQQQQQQPQQQSQQPQQQQPQPQQQQQQQQQ 1540



 Score = 22.2 bits (45), Expect = 6.7
 Identities = 12/54 (22%), Positives = 23/54 (42%)
 Frame = +1

Query: 526  QGQQQEREHMQHSEHAPEQRPPAQHAPHHERDEDGEHPEGGVRPRVDVGVSRLV 687
            Q QQQ+++  Q       Q+P  Q     ++ +  +  +   + +    VS LV
Sbjct: 1504 QPQQQQQQQQQQQPQQQSQQPQQQQPQPQQQQQQQQQQQPQQQQKEYGAVSGLV 1557


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 520 DAQGQQQEREHMQHSEHAPEQRPPAQHA 603
           + Q Q + R H++  +H P Q   A H+
Sbjct: 499 EEQTQSRVRAHLKRLDHQPYQYKIAVHS 526


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 9/41 (21%), Positives = 18/41 (43%)
 Frame = +1

Query: 526 QGQQQEREHMQHSEHAPEQRPPAQHAPHHERDEDGEHPEGG 648
           Q +++ERE  +HS+    Q+   Q     +  +  +    G
Sbjct: 71  QMREREREQREHSDRVTSQQQQQQQQQQQQDQQQQQQSRMG 111


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +1

Query: 778 GEQRHHHHGSAQGRQQSV 831
           G+   HHHGS    Q+ +
Sbjct: 399 GQSSSHHHGSKSWTQEDM 416


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.316    0.135    0.415 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,936
Number of Sequences: 438
Number of extensions: 3056
Number of successful extensions: 22
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29267238
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)