Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16c22f
(747 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0371 - 2678332-2678541,2678650-2678804,2678895-2678940,267... 31 0.74
09_06_0356 - 22498300-22498350,22499251-22499425,22499543-22500786 31 0.97
08_01_0229 + 1834102-1834358,1834442-1834901 31 0.97
03_06_0513 - 34432798-34433043,34433272-34433436,34433557-344338... 31 0.97
01_01_1190 + 9463973-9465732,9466210-9466440,9467664-9467793,946... 30 2.2
06_03_1105 - 27634787-27636025 29 3.0
03_06_0096 - 31627332-31627570,31628467-31628743,31628963-316291... 29 3.0
12_01_0904 + 8791474-8792261,8792935-8793037,8794009-8794055,879... 29 3.9
07_01_0065 + 466416-467465 29 5.2
01_06_0029 + 25751750-25752077,25753501-25753622,25754344-257545... 29 5.2
01_01_0190 + 1656376-1656565,1656655-1657388 29 5.2
09_02_0077 + 3964729-3964734,3965194-3965289,3965744-3973579,397... 28 6.9
04_04_0137 - 23053148-23053798,23053911-23054146,23054268-230544... 28 6.9
03_04_0001 - 16208401-16208778 28 6.9
02_01_0693 - 5183673-5184302 28 6.9
01_06_0263 + 28002315-28002634,28003263-28003350,28004296-280043... 28 6.9
11_03_0057 + 9375083-9375088,9375904-9376031,9376107-9376166,937... 28 9.1
10_07_0119 + 13042477-13042864,13044114-13044259,13046104-13046697 28 9.1
02_04_0499 - 23485707-23485822,23485899-23486112,23486464-234865... 28 9.1
01_06_1237 + 35630146-35630642,35632617-35632950,35633583-35633909 28 9.1
01_06_0678 - 31114259-31114321,31114508-31114552,31114644-311147... 28 9.1
>06_01_0371 -
2678332-2678541,2678650-2678804,2678895-2678940,
2679203-2679424,2679546-2679586,2680104-2680233,
2680316-2680384,2680612-2680665,2680801-2680959,
2681455-2681541,2681628-2681690,2681801-2681840,
2681939-2681985,2682471-2682773
Length = 541
Score = 31.5 bits (68), Expect = 0.74
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 98 DDLVVRPSLVRERSPRKQHHRRAENIKPRRRVHVGGDAIH 217
DD V + ++V + PR H RRA PR+RV D +H
Sbjct: 124 DDTVCQKAIVHKDGPRGNHFRRA---GPRQRVFFESDEVH 160
>09_06_0356 - 22498300-22498350,22499251-22499425,22499543-22500786
Length = 489
Score = 31.1 bits (67), Expect = 0.97
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = -3
Query: 559 SSQSLAGAARSVTVRGAAQADARCRVKPRCEPAPSHSDGAPTASVGEPSQHSVRS 395
SS S A SV V G Q + CR +P + S S + +S G S H+ S
Sbjct: 174 SSSSTDANANSVVV-GDDQCTSSCRTQPHSSSSSSSSSSSSASSSGSSSSHNNNS 227
>08_01_0229 + 1834102-1834358,1834442-1834901
Length = 238
Score = 31.1 bits (67), Expect = 0.97
Identities = 34/111 (30%), Positives = 41/111 (36%), Gaps = 4/111 (3%)
Frame = +3
Query: 279 VRSVGGDTSRPLLLTARTKTGATTWQLPYQSGSMLMSELERTLCWDGSPTDAVGAPSECE 458
V V G+ R R GAT W G++ + RT DG D G C+
Sbjct: 132 VDGVVGERRRWRRWGRRRGGGATRWGSDGNGGAVSATRWGRTGMGDGGGCDGCGRGGGCD 191
Query: 459 GAG---SQRGFTLHLASACAAPLTVTLRAAPARDWL-LGFQARTTVTATQT 599
G G R APL + +R WL L AR VTAT T
Sbjct: 192 GCGRYPPMREDEPRSWVGNVAPLDLAIR------WLVLRVSARVGVTATDT 236
>03_06_0513 -
34432798-34433043,34433272-34433436,34433557-34433842,
34434972-34435054,34435388-34435495,34435687-34435944,
34436388-34436555,34436865-34437090,34437923-34438035,
34438180-34438548,34439475-34439516,34439576-34439686,
34439883-34440086
Length = 792
Score = 31.1 bits (67), Expect = 0.97
Identities = 24/107 (22%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Frame = +3
Query: 384 MSELERTLCWDGSPTDAVGAPSEC-EGAGSQRGFTLHLASACAAPLTVTLRAAPARDWLL 560
+S++E ++C+ GS + +G PS C G+G ++ + +A A V LR A
Sbjct: 89 LSQIEPSMCFLGSGVEQIG-PSVCFLGSGVKQTKLVKIAFRMAVVTAVFLRRVQANSNCA 147
Query: 561 GFQARTTVTATQTGPAVNYY---DFIPGQNSVRLIVESEDEVCATIS 692
+ + + ++ + + I G ++VR++V D++ +S
Sbjct: 148 DMSLQVSSLQEECARFLDSFVAGEEIAGHDAVRMLVGCHDKLTVVLS 194
>01_01_1190 +
9463973-9465732,9466210-9466440,9467664-9467793,
9468723-9468888,9469528-9469859,9470284-9470513,
9471535-9471613,9471689-9471865
Length = 1034
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = -3
Query: 562 PSSQSLAGAARSVTVRGAAQADARCRVKPRCEPAPSHSDGAPTASVGEPSQHSVRSSS 389
P++ L+ +A T+ A+ +PR +PAP S P A+ S S SSS
Sbjct: 3 PAADPLSASAPFPTIPAASSPRNPRAARPRRQPAPFRSSDHPGAASASASASSSSSSS 60
>06_03_1105 - 27634787-27636025
Length = 412
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 491 PRVRLRRAPHRHAASRTRQGLAARLP 568
PR+RL R+ HRH+ S + A R P
Sbjct: 266 PRIRLVRSSHRHSTSSSSSSRAGRSP 291
>03_06_0096 -
31627332-31627570,31628467-31628743,31628963-31629118,
31629205-31629381,31629543-31629745,31630680-31630995
Length = 455
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/30 (56%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +2
Query: 494 RVRLRRAPHRHAASRTRQGL---AARLPGP 574
RVR+RR HRH AS R+ L AARL P
Sbjct: 28 RVRVRRKRHRHPASAARRRLLRRAARLCAP 57
>12_01_0904 +
8791474-8792261,8792935-8793037,8794009-8794055,
8795180-8795717
Length = 491
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -3
Query: 511 AAQADARCRVKPRCEPAPSHSDGAPTASVG-EPSQHSVRSSSDIS 380
AA A+A ++ P P+H G+P A+VG E S+ + S S +S
Sbjct: 94 AAAANAPPPLRRNSFPQPAHDGGSPAAAVGQELSRRASASFSGVS 138
>07_01_0065 + 466416-467465
Length = 349
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 514 GAAQADARCRVKPRCEPAPSHSDGAPTA 431
GAA+ RCR P EP P+ D + A
Sbjct: 22 GAARRFRRCRTAPSSEPPPTDKDNSSAA 49
>01_06_0029 +
25751750-25752077,25753501-25753622,25754344-25754540,
25754641-25754815,25755126-25755260,25755374-25755583
Length = 388
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 7/38 (18%)
Frame = +2
Query: 509 RAPHRHAASRTRQGLAARL-------PGPHHRHRDTDW 601
RA +H S +R+G +ARL PHH+ R DW
Sbjct: 40 RAASQHGGSGSRRGESARLGLGEEPPQAPHHQRRREDW 77
>01_01_0190 + 1656376-1656565,1656655-1657388
Length = 307
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 50 MCISIDGCG**RARCSDDLVVRPSLVRERSPRKQ 151
M +S +GC R CSD+ +RP L RSP Q
Sbjct: 1 MRMSCNGCRVLRKGCSDNCAIRPCLQWIRSPDAQ 34
>09_02_0077 +
3964729-3964734,3965194-3965289,3965744-3973579,
3973665-3973982,3974565-3974763,3974937-3975202,
3975288-3975574,3976714-3977818,3977900-3978046,
3978146-3978226,3978315-3978540,3978622-3978761,
3979539-3979645,3979739-3979841
Length = 3638
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 262 SRVGCGCAASAGTPLGRYCSPPELKQERQHGSSRT 366
S+VGCG +S+ T G +P ++ + Q G+SR+
Sbjct: 600 SKVGCGGESSSCTESGNSSTPLPMETDVQGGTSRS 634
>04_04_0137 -
23053148-23053798,23053911-23054146,23054268-23054458,
23054587-23056010
Length = 833
Score = 28.3 bits (60), Expect = 6.9
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +2
Query: 218 RVHSTVCAERRSSRVPESV---VGAQRRRGHLSAATAHRQN*NRSDNMAAPVPVRIDADV 388
R H +++R+P+ V VG RRG+ +AA HR+ R + P+ V
Sbjct: 84 RAHLPPPLLHKNARLPDPVPGRVGLGHRRGNATAA--HRRRSEREGKKSTPLVVVAAGAA 141
Query: 389 *AGAHAVL 412
+GA AVL
Sbjct: 142 LSGAAAVL 149
>03_04_0001 - 16208401-16208778
Length = 125
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = -3
Query: 517 RGAAQADARCRVKPRCEPAPSHSDGAPTASVGEPSQHSVRSSSDISIDP 371
+ + +A A V PR +PA + PT+ G P S + +++DP
Sbjct: 36 QASPEAVAVALVLPRADPAEVAATAFPTSGSGGPLPPPPSSQASLAVDP 84
>02_01_0693 - 5183673-5184302
Length = 209
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +2
Query: 104 LVVRPSL--VRERSPRKQHHRRAENIKPRRRVHV 199
L VR SL V ER R++ HR+ K +++VHV
Sbjct: 112 LAVRASLALVGERPQRRRRHRQGGGKKQKKKVHV 145
>01_06_0263 +
28002315-28002634,28003263-28003350,28004296-28004377,
28004637-28004764
Length = 205
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +3
Query: 429 DAVGAPSECEGAGSQRGFTLHLASACAAP 515
DA GAP +GA RG L L + AAP
Sbjct: 25 DAAGAPEGYDGASGSRGPPLRLPPSRAAP 53
>11_03_0057 +
9375083-9375088,9375904-9376031,9376107-9376166,
9376832-9376892,9377434-9377583,9377667-9377822,
9377905-9378116,9378572-9378673,9378785-9378924,
9379781-9379932
Length = 388
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +2
Query: 212 IHRVHSTVCAER---RSSRVPESVVGAQRRRGHLSAATAHRQN*NRSDNMAA 358
+H+ ++VCA R + P VVG+ R G+ S +TA + R+D A
Sbjct: 324 MHQGSASVCANRVPQGGAARPGKVVGSALRYGNCSTSTAEQYEHRRTDRNPA 375
>10_07_0119 + 13042477-13042864,13044114-13044259,13046104-13046697
Length = 375
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 274 CGCAASAGTPLGRYCSPP 327
C CAA+AG+P G +PP
Sbjct: 28 CACAATAGSPCGSCGAPP 45
>02_04_0499 -
23485707-23485822,23485899-23486112,23486464-23486511,
23486609-23486695,23486808-23486945,23487159-23487389,
23488524-23489504
Length = 604
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Frame = +2
Query: 200 GGDAIHRV--H--STVCAERRSSRVPESVVGA 283
GGDA+H V H +RRS R+P SVV A
Sbjct: 217 GGDAVHAVAHHLADLTLLDRRSLRIPPSVVAA 248
>01_06_1237 + 35630146-35630642,35632617-35632950,35633583-35633909
Length = 385
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -3
Query: 505 QADARCRVKPRCE-PAPSHSDGAPTASV 425
+A RC VKP C+ PAP D + AS+
Sbjct: 24 EAIPRCYVKPPCDRPAPEADDASSGASI 51
>01_06_0678 -
31114259-31114321,31114508-31114552,31114644-31114742,
31114827-31114872,31115026-31115102,31115385-31115432,
31120640-31120708,31120848-31120853,31120955-31121032,
31121246-31121344,31121427-31121489,31122642-31122713,
31122800-31122874,31122965-31123021,31123983-31124186,
31124317-31124394,31124485-31124547,31124646-31125284,
31125367-31125416,31125496-31125576,31125896-31125923
Length = 679
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -3
Query: 541 GAARSVTVRGAAQADARCRVKPRCEPAPSHSDGAPTASV 425
GAA S GAA++ A RCEP+ S+ D ++V
Sbjct: 163 GAADSGNSEGAAESSAPSVPDERCEPSISNQDAEIVSAV 201
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,462,680
Number of Sequences: 37544
Number of extensions: 493912
Number of successful extensions: 1972
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1970
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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