Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16c11f
         (785 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35400-1|CAA84584.1|  532|Caenorhabditis elegans putative transp...    33   0.31 
U12433-1|AAA20582.1|  532|Caenorhabditis elegans putative transp...    33   0.31 
AF067214-2|AAC17003.1|  344|Caenorhabditis elegans Hypothetical ...    30   2.2  
Z78419-2|CAB01702.1|  154|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z35639-1|CAA84693.1| 1792|Caenorhabditis elegans Hypothetical pr...    29   2.9  

>Z35400-1|CAA84584.1|  532|Caenorhabditis elegans putative
           transposase protein.
          Length = 532

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = -1

Query: 233 VMCPYCQNILC*NYWV 186
           ++CPYC+ +LC N+WV
Sbjct: 506 LLCPYCKKVLCFNHWV 521


>U12433-1|AAA20582.1|  532|Caenorhabditis elegans putative
           transposase protein.
          Length = 532

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = -1

Query: 233 VMCPYCQNILC*NYWV 186
           ++CPYC+ +LC N+WV
Sbjct: 506 LLCPYCKKVLCFNHWV 521


>AF067214-2|AAC17003.1|  344|Caenorhabditis elegans Hypothetical
           protein F56C3.4 protein.
          Length = 344

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 19/66 (28%), Positives = 31/66 (46%)
 Frame = +1

Query: 532 MGTFLLLLVYYWWTSVQGPPVIQWIHRTRQYNTTYPLTRPVIAGDYITFRIGIVADLDTN 711
           +G F++LLV Y   +V+   V  +IH     +       P+     +  +IG+V D+   
Sbjct: 127 LGVFIVLLVVYCSLAVKTTAVAPFIHDASGSSEACGAVEPI----NVLEKIGMVVDISLP 182

Query: 712 SKSSTK 729
           SK S K
Sbjct: 183 SKESVK 188


>Z78419-2|CAB01702.1|  154|Caenorhabditis elegans Hypothetical
           protein F26A3.2 protein.
          Length = 154

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +1

Query: 415 EQKMKGTLRDWRKALRTPITYRVGN 489
           +Q+ +GT+RD   ALRT  T  VGN
Sbjct: 19  DQRYQGTVRDQETALRTSCTLYVGN 43


>Z35639-1|CAA84693.1| 1792|Caenorhabditis elegans Hypothetical
           protein D2045.2 protein.
          Length = 1792

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 16/57 (28%), Positives = 29/57 (50%)
 Frame = -2

Query: 580 ALMSTSNRLIKAEKFPLMSLKQLTVVVYEQHYQLCM*SVFSGLFASRAEYPSFFVLL 410
           A +S  N+ ++A   P +S  +L   VY  + ++CM    S     +A   +F+VL+
Sbjct: 296 AKISAGNQFVQAAVLPFLSKSRLAPTVYMNNLKICMNGSASKSSRVQALTMNFYVLV 352


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,991,697
Number of Sequences: 27780
Number of extensions: 348641
Number of successful extensions: 755
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 755
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)