Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16c07f
         (849 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    24   5.1  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    24   5.1  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          24   6.7  

>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = -3

Query: 145 TQHNTTTVMSMITHLTLAE 89
           T+HN + + S+I HL++A+
Sbjct: 211 TRHNWSAIYSLIFHLSIAD 229


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = -3

Query: 145 TQHNTTTVMSMITHLTLAE 89
           T+HN + + S+I HL++A+
Sbjct: 212 TRHNWSAIYSLIFHLSIAD 230


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 16/44 (36%), Positives = 19/44 (43%)
 Frame = -2

Query: 224 RRRCLA*SGGRSVPPTDPWRHTPRLQHSTQHYNGYVDDHTLDTR 93
           RRRC   +       T P RH P  + ST+   G  DD   D R
Sbjct: 503 RRRCRPRARRNPPATTRPVRHRPTRRKSTK--RGKKDDKGYDRR 544


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,393
Number of Sequences: 2352
Number of extensions: 10517
Number of successful extensions: 26
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90132318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)