Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16c05f
(800 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D50928-1|BAA09487.2| 962|Homo sapiens KIAA0138 protein. 33 1.2
AC004611-1|AAC14666.1| 953|Homo sapiens KIAA0138 protein. 33 1.2
BC046119-1|AAH46119.3| 502|Homo sapiens SLTM protein protein. 33 1.6
BC014944-1|AAH14944.1| 672|Homo sapiens SLTM protein protein. 33 1.6
AK023275-1|BAB14502.1| 478|Homo sapiens protein ( Homo sapiens ... 33 1.6
BC016814-1|AAH16814.1| 198|Homo sapiens apolipoprotein O protein. 31 3.7
BC010102-1|AAH10102.1| 198|Homo sapiens apolipoprotein O protein. 31 3.7
BC002333-1|AAH02333.1| 198|Homo sapiens apolipoprotein O protein. 31 3.7
AY359114-1|AAQ89472.1| 198|Homo sapiens FKVI1866 protein. 31 3.7
AK092490-1|BAC03904.1| 280|Homo sapiens protein ( Homo sapiens ... 31 4.8
AK092761-1|BAC03968.1| 315|Homo sapiens protein ( Homo sapiens ... 31 6.4
>D50928-1|BAA09487.2| 962|Homo sapiens KIAA0138 protein.
Length = 962
Score = 33.1 bits (72), Expect = 1.2
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 551 ERVFTEARASRNE-QRYQRDRRTTDHERSGETRCEHAPVLRRAREEICRQQKTIRLEHPR 727
ER+ E + R E +R +R+R + R R + + R REE+ RQQ+ +R E R
Sbjct: 675 ERLQLECQRQRLERERMERERLERERMRVERERRKEQERIHREREELRRQQEQLRYEQER 734
>AC004611-1|AAC14666.1| 953|Homo sapiens KIAA0138 protein.
Length = 953
Score = 33.1 bits (72), Expect = 1.2
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 551 ERVFTEARASRNE-QRYQRDRRTTDHERSGETRCEHAPVLRRAREEICRQQKTIRLEHPR 727
ER+ E + R E +R +R+R + R R + + R REE+ RQQ+ +R E R
Sbjct: 666 ERLQLECQRQRLERERMERERLERERMRVERERRKEQERIHREREELRRQQEQLRYEQER 725
>BC046119-1|AAH46119.3| 502|Homo sapiens SLTM protein protein.
Length = 502
Score = 32.7 bits (71), Expect = 1.6
Identities = 24/83 (28%), Positives = 39/83 (46%)
Frame = +2
Query: 479 DRPNRIYLRGAHQRRPIPDSQ*YLERVFTEARASRNEQRYQRDRRTTDHERSGETRCEHA 658
+R R +R +R Q ER+ E R +R +R+R + R + R + A
Sbjct: 109 ERRERERIRIIREREERERLQRERERLEIE-RQKLERERMERERLERERIRIEQERRKEA 167
Query: 659 PVLRRAREEICRQQKTIRLEHPR 727
+ R REE+ RQQ+ +R E +
Sbjct: 168 ERIAREREELRRQQQQLRYEQEK 190
>BC014944-1|AAH14944.1| 672|Homo sapiens SLTM protein protein.
Length = 672
Score = 32.7 bits (71), Expect = 1.6
Identities = 24/83 (28%), Positives = 39/83 (46%)
Frame = +2
Query: 479 DRPNRIYLRGAHQRRPIPDSQ*YLERVFTEARASRNEQRYQRDRRTTDHERSGETRCEHA 658
+R R +R +R Q ER+ E R +R +R+R + R + R + A
Sbjct: 279 ERRERERIRIIREREERERLQRERERLEIE-RQKLERERMERERLERERIRIEQERRKEA 337
Query: 659 PVLRRAREEICRQQKTIRLEHPR 727
+ R REE+ RQQ+ +R E +
Sbjct: 338 ERIAREREELRRQQQQLRYEQEK 360
>AK023275-1|BAB14502.1| 478|Homo sapiens protein ( Homo sapiens
cDNA FLJ13213 fis, clone NT2RP4001126, weakly similar to
TRICHOHYALIN. ).
Length = 478
Score = 32.7 bits (71), Expect = 1.6
Identities = 24/83 (28%), Positives = 39/83 (46%)
Frame = +2
Query: 479 DRPNRIYLRGAHQRRPIPDSQ*YLERVFTEARASRNEQRYQRDRRTTDHERSGETRCEHA 658
+R R +R +R Q ER+ E R +R +R+R + R + R + A
Sbjct: 85 ERRERERIRIIREREERERLQRERERLEIE-RQKLERERMERERLERERIRIEQERRKEA 143
Query: 659 PVLRRAREEICRQQKTIRLEHPR 727
+ R REE+ RQQ+ +R E +
Sbjct: 144 ERIAREREELRRQQQQLRYEQEK 166
>BC016814-1|AAH16814.1| 198|Homo sapiens apolipoprotein O protein.
Length = 198
Score = 31.5 bits (68), Expect = 3.7
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 282 EQYYKRKPQFFVGVKGKKNFYDYLEN-PDGYFKR-APLGFTGVRG 410
E Y + KP+ V+ + YDYL+N P G+F R +GF G+ G
Sbjct: 80 ETYSQTKPKMQSLVQWGLDSYDYLQNAPPGFFPRLGVIGFAGLIG 124
>BC010102-1|AAH10102.1| 198|Homo sapiens apolipoprotein O protein.
Length = 198
Score = 31.5 bits (68), Expect = 3.7
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 282 EQYYKRKPQFFVGVKGKKNFYDYLEN-PDGYFKR-APLGFTGVRG 410
E Y + KP+ V+ + YDYL+N P G+F R +GF G+ G
Sbjct: 80 ETYSQTKPKMQSLVQWGLDSYDYLQNAPPGFFPRLGVIGFAGLIG 124
>BC002333-1|AAH02333.1| 198|Homo sapiens apolipoprotein O protein.
Length = 198
Score = 31.5 bits (68), Expect = 3.7
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 282 EQYYKRKPQFFVGVKGKKNFYDYLEN-PDGYFKR-APLGFTGVRG 410
E Y + KP+ V+ + YDYL+N P G+F R +GF G+ G
Sbjct: 80 ETYSQTKPKMQSLVQWGLDSYDYLQNAPPGFFPRLGVIGFAGLIG 124
>AY359114-1|AAQ89472.1| 198|Homo sapiens FKVI1866 protein.
Length = 198
Score = 31.5 bits (68), Expect = 3.7
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 282 EQYYKRKPQFFVGVKGKKNFYDYLEN-PDGYFKR-APLGFTGVRG 410
E Y + KP+ V+ + YDYL+N P G+F R +GF G+ G
Sbjct: 80 ETYSQTKPKMQSLVQWGLDSYDYLQNAPPGFFPRLGVIGFAGLIG 124
>AK092490-1|BAC03904.1| 280|Homo sapiens protein ( Homo sapiens
cDNA FLJ35171 fis, clone PLACE6013220, weakly similar to
TRICHOHYALIN. ).
Length = 280
Score = 31.1 bits (67), Expect = 4.8
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 566 EARASRNEQRY-QRDRRTTDHERSGETRCEHAPVLRRAREEICRQQKTIRLEHPR 727
E R E+R +++ R +HE E CE LR E +C Q++ +R + R
Sbjct: 94 EERLREQEERLCEQEERLREHE---ERLCEQEERLREQEERLCEQEERLREQEER 145
>AK092761-1|BAC03968.1| 315|Homo sapiens protein ( Homo sapiens
cDNA FLJ35442 fis, clone SMINT2003128. ).
Length = 315
Score = 30.7 bits (66), Expect = 6.4
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 568 SSSVKKRTAIPTRQKNNGSRTKWRNALRTCTSFTAC 675
S+S+ K+T P ++++ R WR CT +AC
Sbjct: 55 STSLWKKTTSPCGRRSSPCRPSWRGGAGPCTCMSAC 90
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,984,587
Number of Sequences: 237096
Number of extensions: 2388673
Number of successful extensions: 6283
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6240
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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