Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16c05f
         (800 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003389-1|AAC71138.2|  865|Caenorhabditis elegans Hypothetical ...    30   1.7  
U28991-9|AAU05576.1|  484|Caenorhabditis elegans Hypothetical pr...    30   2.2  
AL110478-6|CAE17957.2|  952|Caenorhabditis elegans Hypothetical ...    30   2.2  
AF038618-3|AAB92073.1|  572|Caenorhabditis elegans Hypothetical ...    29   2.9  
U12965-3|AAZ32811.1|  980|Caenorhabditis elegans Hypothetical pr...    29   5.1  
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a...    29   5.1  
AF038619-6|AAB92077.2|  442|Caenorhabditis elegans Hypothetical ...    29   5.1  
Z81017-13|CAB02674.2|  526|Caenorhabditis elegans Hypothetical p...    28   6.8  
Z68005-5|CAA91993.2|  526|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z27079-1|CAA81593.2|  411|Caenorhabditis elegans Hypothetical pr...    28   6.8  
U53180-6|AAA96288.1|  202|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z83244-5|CAB54315.1|  568|Caenorhabditis elegans Hypothetical pr...    28   8.9  
Z83244-4|CAB54314.1|  562|Caenorhabditis elegans Hypothetical pr...    28   8.9  
U20864-11|AAV58867.1|  583|Caenorhabditis elegans C. elegans ADA...    28   8.9  
U20864-10|AAK68355.1|  596|Caenorhabditis elegans C. elegans ADA...    28   8.9  
AF229855-1|AAF71303.1| 1497|Caenorhabditis elegans dual oxidase ...    28   8.9  
AF043697-1|AAK73882.1| 1497|Caenorhabditis elegans Blistered cut...    28   8.9  

>AF003389-1|AAC71138.2|  865|Caenorhabditis elegans Hypothetical
           protein F23H11.2 protein.
          Length = 865

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 15/46 (32%), Positives = 19/46 (41%)
 Frame = +3

Query: 549 LNEYLQKLERQETNSDTNETEEQRITNEVEKRAANMHQFYGVRGKK 686
           +N  L     QE      ETE QR  N + K      QF+G+   K
Sbjct: 818 INMELIDYRNQEIRDSVTETEVQRAQNRIMKLCYEFEQFFGILAVK 863


>U28991-9|AAU05576.1|  484|Caenorhabditis elegans Hypothetical
           protein F08F8.10b protein.
          Length = 484

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
 Frame = +3

Query: 267 EDDSSEQYYKRKPQFFVGVKGKKNFYDYLENPDGYFKRAP---LGFTGVRGKKEDMSSEY 437
           +    EQYY    +    + G+++ Y YL   D   ++     + + G  G   + S+ Y
Sbjct: 128 DQGGEEQYYDEDEEIEFNLTGEQHKYQYLGMNDNKARKKAAKLISYPGYTGSTLNTSNVY 187

Query: 438 QYYP 449
           Q YP
Sbjct: 188 QTYP 191


>AL110478-6|CAE17957.2|  952|Caenorhabditis elegans Hypothetical
           protein Y26D4A.14 protein.
          Length = 952

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 22/98 (22%), Positives = 47/98 (47%)
 Frame = +3

Query: 351 LENPDGYFKRAPLGFTGVRGKKEDMSSEYQYYPYEALKRDGSLIGQIEYTSAEHINDGQY 530
           ++N   + K+ P+  +  R + +    + Q   YE  KR+  ++ + E    ++  + + 
Sbjct: 180 IKNHSRFPKQIPVAIS-TREELQQQRHKQQLEEYE--KRNQEILRREEEIKQQN-QEREK 235

Query: 531 PILNDILNEYLQKLERQETNSDTNETEEQRITNEVEKR 644
            I +D      +KL+R+E     N+  E+ I ++ EKR
Sbjct: 236 QINDDFEKRKQEKLQREEEMKQQNQEREKLIADDFEKR 273


>AF038618-3|AAB92073.1|  572|Caenorhabditis elegans Hypothetical
           protein F42G8.7 protein.
          Length = 572

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
 Frame = +3

Query: 504 AEHINDGQYPILNDILNEYLQKL--ERQETNSDTNETEEQRITNEVEK 641
           A+  ND  +  L++ LNE +QK+  E +E     +E + ++ T ++EK
Sbjct: 356 ADLFNDNHHRKLHEKLNELIQKIVTETEEIEKQASEEKVEKPTEKLEK 403


>U12965-3|AAZ32811.1|  980|Caenorhabditis elegans Hypothetical
           protein F23F12.8 protein.
          Length = 980

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
 Frame = +3

Query: 414 KEDMSSEYQYYPYEALKRDGSLIGQIEYTSA--EHI--NDGQYPILNDILNEYLQKLERQ 581
           KE     +   PYE + R     G  E T+   E+    +GQ    N+ LN+ L  ++ Q
Sbjct: 246 KEVQGMPHTLAPYEKMDRRPDSFGVEELTTMTPEYTVRYNGQTMTENEFLNQLLHIVQHQ 305

Query: 582 ETNSDTNE------TEEQRITNEVEKRAANMHQ 662
           +T S+  +       E++R+  E E++A  + +
Sbjct: 306 KTVSERQQQEKFEKMEQERLRQEKEEKARELER 338


>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
            assigned gene nameprotein 192 protein.
          Length = 2957

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 1/142 (0%)
 Frame = +3

Query: 276  SSEQYYKRKPQFFVGVKGKKNFYDYLENPDGYFKRAPLGFTGVRGKKE-DMSSEYQYYPY 452
            SS++   R+P   V    KK   D  ++ D Y +R      G  GKK+ D + E      
Sbjct: 891  SSKKKSYRRPAVVVAKSRKKKSVDDSDDDDFYPQRGRGKKKGGGGKKKADPTDEAGVEGA 950

Query: 453  EALKRDGSLIGQIEYTSAEHINDGQYPILNDILNEYLQKLERQETNSDTNETEEQRITNE 632
            ++   D   + +I+ T A    D    ++  ILN  + K+E++   ++  E  E+    +
Sbjct: 951  KSDDEDDEFLMKID-TPAP---DPNAMVVEKILNMRMGKVEKKVPETEVAEGSEENGEEK 1006

Query: 633  VEKRAANMHQFYGVRGKKSVDN 698
             E++     +  G  G +SV N
Sbjct: 1007 SEEKVKKEPKENGENG-ESVGN 1027


>AF038619-6|AAB92077.2|  442|Caenorhabditis elegans Hypothetical
           protein F56A11.6 protein.
          Length = 442

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +2

Query: 572 RASRNEQRYQRDRRTTDHERSGETRCEHAPVLRRARE-EICRQQKTIRLEHPRE 730
           R  R+ +R ++DR   D ERS + R + +   R  RE E  R+++  R    RE
Sbjct: 315 REDRDRERSRKDREDRDRERSRKEREDRSRKDREDRERERSRKEREDRSRKDRE 368


>Z81017-13|CAB02674.2|  526|Caenorhabditis elegans Hypothetical
           protein F59F3.4 protein.
          Length = 526

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +3

Query: 72  VMVCG*SFFFVSTFTLRPAFERINDMGTYRA 164
           +MVCG     + T++ +P+F RIN+  ++RA
Sbjct: 102 IMVCG---TMIKTYSTQPSFMRINETKSHRA 129


>Z68005-5|CAA91993.2|  526|Caenorhabditis elegans Hypothetical
           protein F59F3.4 protein.
          Length = 526

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +3

Query: 72  VMVCG*SFFFVSTFTLRPAFERINDMGTYRA 164
           +MVCG     + T++ +P+F RIN+  ++RA
Sbjct: 102 IMVCG---TMIKTYSTQPSFMRINETKSHRA 129


>Z27079-1|CAA81593.2|  411|Caenorhabditis elegans Hypothetical
           protein T05G5.1 protein.
          Length = 411

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = +2

Query: 551 ERVFTEARASRNEQRYQRDRRTTDHE-RSGETRCEHAPVLRRAREEICRQQKTIRLEHPR 727
           E+ + E  A R +QR + +RR  +   R  E R +H    R   EE  R++++ RL   R
Sbjct: 142 EQYWKEETARREQQRAEAERRIQEQRVRDDERRRQH-EAERSQIEERRREEESRRLAAQR 200

Query: 728 E 730
           E
Sbjct: 201 E 201


>U53180-6|AAA96288.1|  202|Caenorhabditis elegans Hypothetical
           protein D1014.4 protein.
          Length = 202

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 28/128 (21%), Positives = 54/128 (42%)
 Frame = +3

Query: 255 GKKHEDDSSEQYYKRKPQFFVGVKGKKNFYDYLENPDGYFKRAPLGFTGVRGKKEDMSSE 434
           G + E+DS+ +Y+K K             Y+ ++      +   L       +K++ +SE
Sbjct: 2   GNEEEEDSNVRYWKTKYDHL------NEDYERIKIRTESLENRLLDVVEENDRKDNENSE 55

Query: 435 YQYYPYEALKRDGSLIGQIEYTSAEHINDGQYPILNDILNEYLQKLERQETNSDTNETEE 614
                 EALK     + Q+E     + N  +    + I +E  +KLE+ +   D    E+
Sbjct: 56  RIRQLDEALKESQKRVEQLEAACFRYKNQAKGEFASSIKSE--EKLEKSQRKDD----ED 109

Query: 615 QRITNEVE 638
              +NE++
Sbjct: 110 NEYSNELQ 117


>Z83244-5|CAB54315.1|  568|Caenorhabditis elegans Hypothetical
           protein W06F12.2b protein.
          Length = 568

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +2

Query: 551 ERVFTEARASRNEQRYQRDRRTTDHERSGETRCEHAPVLRRAREEICRQQ 700
           ER   +   +R  +R +R+R   D+ER    R   AP  R+  +   R Q
Sbjct: 430 ERDRNDRDRNREREREERERENRDNERGRRERESEAPRRRKEDDRRSRHQ 479


>Z83244-4|CAB54314.1|  562|Caenorhabditis elegans Hypothetical
           protein W06F12.2a protein.
          Length = 562

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +2

Query: 551 ERVFTEARASRNEQRYQRDRRTTDHERSGETRCEHAPVLRRAREEICRQQ 700
           ER   +   +R  +R +R+R   D+ER    R   AP  R+  +   R Q
Sbjct: 424 ERDRNDRDRNREREREERERENRDNERGRRERESEAPRRRKEDDRRSRHQ 473


>U20864-11|AAV58867.1|  583|Caenorhabditis elegans C. elegans ADA-2
           protein, isoform b protein.
          Length = 583

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
 Frame = +2

Query: 569 ARASRNEQRYQRDRRTTDHERSGETRCEHAPVLRRAREEI----CRQQKTIRLE 718
           A   R +   +R     D +++GET  ++APV R++++++    C Q+K I  E
Sbjct: 517 ASIERIDNVVERIEVLQDLQKNGETTLKNAPVERKSKKKMRKIDCEQKKKIATE 570


>U20864-10|AAK68355.1|  596|Caenorhabditis elegans C. elegans ADA-2
           protein, isoform a protein.
          Length = 596

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
 Frame = +2

Query: 569 ARASRNEQRYQRDRRTTDHERSGETRCEHAPVLRRAREEI----CRQQKTIRLE 718
           A   R +   +R     D +++GET  ++APV R++++++    C Q+K I  E
Sbjct: 530 ASIERIDNVVERIEVLQDLQKNGETTLKNAPVERKSKKKMRKIDCEQKKKIATE 583


>AF229855-1|AAF71303.1| 1497|Caenorhabditis elegans dual oxidase
            protein.
          Length = 1497

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 1/110 (0%)
 Frame = -1

Query: 698  VVDRFLPSHA-VKLVHVRSAFLHFVRDPLFFCLVGIAVRFLTLELL*ILVQDIIENRVLA 522
            VVDR + S A + L+H  SAFL   R  +F     +A+  +         + + ENR L 
Sbjct: 960  VVDRSINSSAPLTLIHKVSAFLETYRQHVFIVFCFVAINLVLFFERFWHYRYMAENRDLR 1019

Query: 521  VVDVLRGGIFDLAYQRPIALQCFVWIVLVFGRHVLFFASDTCEA*RSPFE 372
               V+  GI            C   I+L   R+++    +T  A   PF+
Sbjct: 1020 --RVMGAGIAITRGAAGALSFCMALILLTVCRNIITLLRETVIAQYIPFD 1067


>AF043697-1|AAK73882.1| 1497|Caenorhabditis elegans Blistered cuticle
            protein 3 protein.
          Length = 1497

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 1/110 (0%)
 Frame = -1

Query: 698  VVDRFLPSHA-VKLVHVRSAFLHFVRDPLFFCLVGIAVRFLTLELL*ILVQDIIENRVLA 522
            VVDR + S A + L+H  SAFL   R  +F     +A+  +         + + ENR L 
Sbjct: 960  VVDRSINSSAPLTLIHKVSAFLETYRQHVFIVFCFVAINLVLFFERFWHYRYMAENRDLR 1019

Query: 521  VVDVLRGGIFDLAYQRPIALQCFVWIVLVFGRHVLFFASDTCEA*RSPFE 372
               V+  GI            C   I+L   R+++    +T  A   PF+
Sbjct: 1020 --RVMGAGIAITRGAAGALSFCMALILLTVCRNIITLLRETVIAQYIPFD 1067


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,646,166
Number of Sequences: 27780
Number of extensions: 379651
Number of successful extensions: 1259
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1254
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)