Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16c01f
(824 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92970-1|CAB07480.1| 488|Caenorhabditis elegans Hypothetical pr... 127 1e-29
AB072567-1|BAB88817.1| 488|Caenorhabditis elegans ceERp57 protein. 127 1e-29
L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical pr... 83 2e-16
U41542-8|AAN39682.1| 437|Caenorhabditis elegans Protein disulfi... 78 9e-15
U41542-7|ABO16445.1| 371|Caenorhabditis elegans Protein disulfi... 78 9e-15
U41542-6|AAK39152.1| 493|Caenorhabditis elegans Protein disulfi... 78 9e-15
Z37139-1|CAA85491.1| 485|Caenorhabditis elegans Hypothetical pr... 77 2e-14
U95074-1|AAB94647.1| 485|Caenorhabditis elegans protein disulph... 77 2e-14
Z98866-5|CAB11548.1| 436|Caenorhabditis elegans Hypothetical pr... 71 1e-12
U40411-4|AAC47065.1| 440|Caenorhabditis elegans Temporarily ass... 68 9e-12
AC006834-9|AAL11490.1| 447|Caenorhabditis elegans Hypothetical ... 57 2e-08
AF250045-1|AAG17620.1| 246|Caenorhabditis elegans thioredoxin-l... 50 3e-06
AF125955-2|AAD14719.1| 246|Caenorhabditis elegans Dumpy : short... 50 3e-06
AL032657-16|CAJ85780.1| 318|Caenorhabditis elegans Hypothetical... 45 6e-05
AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical... 45 6e-05
AF106589-2|AAC78230.1| 107|Caenorhabditis elegans Hypothetical ... 43 2e-04
AC084197-8|AAG23476.1| 228|Caenorhabditis elegans Hypothetical ... 43 2e-04
U23168-7|AAC38808.1| 115|Caenorhabditis elegans Hypothetical pr... 40 0.002
U23168-6|AAP86623.1| 114|Caenorhabditis elegans Hypothetical pr... 40 0.002
DQ241300-1|ABB45864.1| 114|Caenorhabditis elegans TRX-1b protein. 40 0.002
DQ241299-1|ABB45863.1| 115|Caenorhabditis elegans TRX-1a protein. 40 0.002
U80848-2|AAB37989.1| 574|Caenorhabditis elegans Hypothetical pr... 37 0.020
AF143900-1|AAF66677.1| 284|Caenorhabditis elegans thioredoxin-l... 34 0.11
AF143405-1|AAF66636.1| 284|Caenorhabditis elegans thioredoxin-l... 34 0.11
AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical ... 34 0.11
AC024810-17|AAF60759.1| 284|Caenorhabditis elegans Hypothetical... 34 0.11
Z69637-1|CAA93467.1| 601|Caenorhabditis elegans Hypothetical pr... 34 0.14
Z77657-7|CAH60768.1| 320|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z71178-7|CAA94881.1| 119|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z81552-7|CAB04487.2| 606|Caenorhabditis elegans Hypothetical pr... 31 1.3
AL117201-5|CAB57916.1| 606|Caenorhabditis elegans Hypothetical ... 31 1.3
AF068720-8|AAM15583.1| 142|Caenorhabditis elegans Hypothetical ... 30 2.3
U23511-9|AAC46796.1| 140|Caenorhabditis elegans Hypothetical pr... 29 3.1
U23511-8|AAU20849.1| 167|Caenorhabditis elegans Hypothetical pr... 29 3.1
U70853-9|AAB09142.2| 158|Caenorhabditis elegans Hypothetical pr... 29 4.0
U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated p... 28 7.1
D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine recep... 28 7.1
U88314-9|AAF99881.1| 408|Caenorhabditis elegans Hypothetical pr... 28 9.3
AF040655-12|AAB95039.1| 507|Caenorhabditis elegans Hypothetical... 28 9.3
AF039053-5|AAC25875.2| 293|Caenorhabditis elegans Serpentine re... 28 9.3
AF016420-1|AAB65307.2| 310|Caenorhabditis elegans Serpentine re... 28 9.3
>Z92970-1|CAB07480.1| 488|Caenorhabditis elegans Hypothetical
protein H06O01.1 protein.
Length = 488
Score = 127 bits (306), Expect = 1e-29
Identities = 55/101 (54%), Positives = 72/101 (71%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLKDEEVDIIKIDATANDWPKSQFDVSGFPTIFWKPKDSS 181
YAPWCGHC+ LAP +EEL EKL E+V I K+DATAND P F+V GFPT+FW PK++
Sbjct: 388 YAPWCGHCKSLAPKYEELAEKLNKEDVIIAKMDATANDVPP-MFEVRGFPTLFWLPKNAK 446
Query: 182 KKPQRYNGGRALEDFIKYVSEQATSELKGWDRKGNAKQGKE 304
P YNGGR ++DF+ ++S+ +T LKG+ R G K+ E
Sbjct: 447 SNPIPYNGGREVKDFVSFISKHSTDGLKGFSRDGKKKKKTE 487
Score = 64.9 bits (151), Expect = 7e-11
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKL--KDEEVDIIKIDATANDWPKSQFDVSGFPTIFWKPKD 175
YAPWCGHC+K+AP +E KL D V ++K+D T +F V GFPT+ K
Sbjct: 45 YAPWCGHCKKIAPEYERAAPKLASNDPPVALVKVDCTTEKTVCDKFGVKGFPTL--KIFR 102
Query: 176 SSKKPQRYNGGRALEDFIKYVSEQA 250
+ Q Y+G R + +K++ Q+
Sbjct: 103 NGVPAQDYDGPRDADGIVKFMRGQS 127
>AB072567-1|BAB88817.1| 488|Caenorhabditis elegans ceERp57 protein.
Length = 488
Score = 127 bits (306), Expect = 1e-29
Identities = 55/101 (54%), Positives = 72/101 (71%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLKDEEVDIIKIDATANDWPKSQFDVSGFPTIFWKPKDSS 181
YAPWCGHC+ LAP +EEL EKL E+V I K+DATAND P F+V GFPT+FW PK++
Sbjct: 388 YAPWCGHCKSLAPKYEELAEKLNKEDVIIAKMDATANDVPP-MFEVRGFPTLFWLPKNAK 446
Query: 182 KKPQRYNGGRALEDFIKYVSEQATSELKGWDRKGNAKQGKE 304
P YNGGR ++DF+ ++S+ +T LKG+ R G K+ E
Sbjct: 447 SNPIPYNGGREVKDFVSFISKHSTDGLKGFSRDGKKKKKTE 487
Score = 64.9 bits (151), Expect = 7e-11
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKL--KDEEVDIIKIDATANDWPKSQFDVSGFPTIFWKPKD 175
YAPWCGHC+K+AP +E KL D V ++K+D T +F V GFPT+ K
Sbjct: 45 YAPWCGHCKKIAPEYERAAPKLASNDPPVALVKVDCTTEKTVCDKFGVKGFPTL--KIFR 102
Query: 176 SSKKPQRYNGGRALEDFIKYVSEQA 250
+ Q Y+G R + +K++ Q+
Sbjct: 103 NGVPAQDYDGPRDADGIVKFMRGQS 127
>L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical
protein C14B9.2 protein.
Length = 618
Score = 83.0 bits (196), Expect = 2e-16
Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLKDEEVDII--KIDATANDWPKSQFDVSGFPTIFWKPKD 175
YAPWCGHC+ + EL + LK + +++ K+DAT ND P SQF V GFPTI++ P
Sbjct: 525 YAPWCGHCKSFESKYVELAQALKKTQPNVVLAKMDATINDAP-SQFAVEGFPTIYFAPAG 583
Query: 176 SSKKPQRYNGGRALEDFIKYVSEQATSELKGWD 274
+P +Y+G R LED K++++ + D
Sbjct: 584 KKSEPIKYSGNRDLEDLKKFMTKHGVKSFQKKD 616
Score = 68.1 bits (159), Expect = 7e-12
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLKDEEVDIIKIDATANDWPKSQFDVSGFPTI-FWKPKDS 178
YAPWCGHC+ LAP +E+ K+ + + K+DAT +F++ G+PT+ FWK
Sbjct: 61 YAPWCGHCKHLAPEYEKASSKV---SIPLAKVDATVETELGKRFEIQGYPTLKFWK---D 114
Query: 179 SKKPQRYNGGRALEDFIKYVSEQATSELK 265
K P Y+GGR +++V + K
Sbjct: 115 GKGPNDYDGGRDEAGIVEWVESRVDPNYK 143
Score = 67.3 bits (157), Expect = 1e-11
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLKDE--EVDIIKIDATANDWPKSQFDVSGFPTIFWKPKD 175
YAPWCGHC+KLAP +E+ +KLK + +V + K+DAT +++ VSG+PT+ K
Sbjct: 172 YAPWCGHCKKLAPEYEKAAQKLKAQGSKVKLGKVDATIEKDLGTKYGVSGYPTM--KIIR 229
Query: 176 SSKKPQRYNGGRALEDFIKYVSEQATSELK 265
+ ++ YNG R IKY+++Q+ K
Sbjct: 230 NGRRFD-YNGPREAAGIIKYMTDQSKPAAK 258
>U41542-8|AAN39682.1| 437|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform b protein.
Length = 437
Score = 77.8 bits (183), Expect = 9e-15
Identities = 41/103 (39%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLKDEE-VDIIKIDATANDWPKSQFDVSGFPTIFWKPKDS 178
YAPWCGHC++LAP W++LGEK D+E + I K+D+T N+ + FPTI + P S
Sbjct: 333 YAPWCGHCKQLAPTWDKLGEKFADDESIVIAKMDSTLNE--VEDVKIQSFPTIKFFPAGS 390
Query: 179 SKKPQRYNGGRALEDFIKYVSEQATSELKGWDRKGNAKQGKEE 307
+K Y G R +E F K++ E E G + A++ +E
Sbjct: 391 NKVVD-YTGDRTIEGFTKFL-ETNGKEGAGASEEEKAEEEADE 431
Score = 71.3 bits (167), Expect = 8e-13
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLKDEEVDII--KIDATANDWPKSQFDVSGFPTIFWKPKD 175
YAPWCGHC+ LAP + + +LK+E DI K+DAT + S+F+V G+PT+
Sbjct: 48 YAPWCGHCKSLAPEYAKAATQLKEEGSDIKLGKLDATVHGEVSSKFEVRGYPTL---KLF 104
Query: 176 SSKKPQRYNGGRALEDFIKYVSEQ 247
+ KPQ YNGGR + I ++ ++
Sbjct: 105 RNGKPQEYNGGRDHDSIIAWLKKK 128
>U41542-7|ABO16445.1| 371|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform c protein.
Length = 371
Score = 77.8 bits (183), Expect = 9e-15
Identities = 41/103 (39%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLKDEE-VDIIKIDATANDWPKSQFDVSGFPTIFWKPKDS 178
YAPWCGHC++LAP W++LGEK D+E + I K+D+T N+ + FPTI + P S
Sbjct: 267 YAPWCGHCKQLAPTWDKLGEKFADDESIVIAKMDSTLNE--VEDVKIQSFPTIKFFPAGS 324
Query: 179 SKKPQRYNGGRALEDFIKYVSEQATSELKGWDRKGNAKQGKEE 307
+K Y G R +E F K++ E E G + A++ +E
Sbjct: 325 NKVVD-YTGDRTIEGFTKFL-ETNGKEGAGASEEEKAEEEADE 365
Score = 71.3 bits (167), Expect = 8e-13
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLKDEEVDII--KIDATANDWPKSQFDVSGFPTIFWKPKD 175
YAPWCGHC+ LAP + + +LK+E DI K+DAT + S+F+V G+PT+
Sbjct: 48 YAPWCGHCKSLAPEYAKAATQLKEEGSDIKLGKLDATVHGEVSSKFEVRGYPTL---KLF 104
Query: 176 SSKKPQRYNGGRALEDFIKYVSEQ 247
+ KPQ YNGGR + I ++ ++
Sbjct: 105 RNGKPQEYNGGRDHDSIIAWLKKK 128
>U41542-6|AAK39152.1| 493|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform a protein.
Length = 493
Score = 77.8 bits (183), Expect = 9e-15
Identities = 41/103 (39%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLKDEE-VDIIKIDATANDWPKSQFDVSGFPTIFWKPKDS 178
YAPWCGHC++LAP W++LGEK D+E + I K+D+T N+ + FPTI + P S
Sbjct: 389 YAPWCGHCKQLAPTWDKLGEKFADDESIVIAKMDSTLNE--VEDVKIQSFPTIKFFPAGS 446
Query: 179 SKKPQRYNGGRALEDFIKYVSEQATSELKGWDRKGNAKQGKEE 307
+K Y G R +E F K++ E E G + A++ +E
Sbjct: 447 NKVVD-YTGDRTIEGFTKFL-ETNGKEGAGASEEEKAEEEADE 487
Score = 71.3 bits (167), Expect = 8e-13
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLKDEEVDII--KIDATANDWPKSQFDVSGFPTIFWKPKD 175
YAPWCGHC+ LAP + + +LK+E DI K+DAT + S+F+V G+PT+
Sbjct: 48 YAPWCGHCKSLAPEYAKAATQLKEEGSDIKLGKLDATVHGEVSSKFEVRGYPTL---KLF 104
Query: 176 SSKKPQRYNGGRALEDFIKYVSEQ 247
+ KPQ YNGGR + I ++ ++
Sbjct: 105 RNGKPQEYNGGRDHDSIIAWLKKK 128
>Z37139-1|CAA85491.1| 485|Caenorhabditis elegans Hypothetical
protein C14B1.1 protein.
Length = 485
Score = 76.6 bits (180), Expect = 2e-14
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLKDE--EVDIIKIDATANDWPKSQFDVSGFPTIFWKPKD 175
YAPWC HC+ LAP ++E + LK+E ++ + K+DAT N S+F+V G+PTI +
Sbjct: 48 YAPWCVHCKSLAPKYDEAADLLKEEGSDIKLAKVDATENQALASKFEVRGYPTILY---F 104
Query: 176 SSKKPQRYNGGRALEDFIKYVSEQA 250
S KP +Y GGRA + +V +++
Sbjct: 105 KSGKPTKYTGGRATAQIVDWVKKKS 129
Score = 76.6 bits (180), Expect = 2e-14
Identities = 45/104 (43%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLK-DEEVDIIKIDATANDWPKSQFDVSGFPTIFWKPKDS 178
YAPWCGHC++L PVW+EL EK + + V I K+DAT N+ + V+ FPT+ P S
Sbjct: 389 YAPWCGHCKQLVPVWDELAEKYESNPNVVIAKLDATLNE--LADVKVNSFPTLKLWPAGS 446
Query: 179 SKKPQRYNGGRALEDFIKYVSEQATSELKGWDRKGNAKQGKEEL 310
S P Y+G R LE F ++V++ A S A Q EEL
Sbjct: 447 S-TPVDYDGDRNLEKFEEFVNKYAGSA----SESETASQDHEEL 485
>U95074-1|AAB94647.1| 485|Caenorhabditis elegans protein disulphide
isomerase isoformI protein.
Length = 485
Score = 76.6 bits (180), Expect = 2e-14
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLKDE--EVDIIKIDATANDWPKSQFDVSGFPTIFWKPKD 175
YAPWC HC+ LAP ++E + LK+E ++ + K+DAT N S+F+V G+PTI +
Sbjct: 48 YAPWCVHCKSLAPKYDEAADLLKEEGSDIKLAKVDATENQALASKFEVRGYPTILY---F 104
Query: 176 SSKKPQRYNGGRALEDFIKYVSEQA 250
S KP +Y GGRA + +V +++
Sbjct: 105 KSGKPTKYTGGRATAQIVDWVKKKS 129
Score = 76.6 bits (180), Expect = 2e-14
Identities = 45/104 (43%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLK-DEEVDIIKIDATANDWPKSQFDVSGFPTIFWKPKDS 178
YAPWCGHC++L PVW+EL EK + + V I K+DAT N+ + V+ FPT+ P S
Sbjct: 389 YAPWCGHCKQLVPVWDELAEKYESNPNVVIAKLDATLNE--LADVKVNSFPTLKLWPAGS 446
Query: 179 SKKPQRYNGGRALEDFIKYVSEQATSELKGWDRKGNAKQGKEEL 310
S P Y+G R LE F ++V++ A S A Q EEL
Sbjct: 447 S-TPVDYDGDRNLEKFEEFVNKYAGSA----SESETASQDHEEL 485
>Z98866-5|CAB11548.1| 436|Caenorhabditis elegans Hypothetical
protein Y49E10.4 protein.
Length = 436
Score = 70.5 bits (165), Expect = 1e-12
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLKDEEVDIIKIDATANDWPKSQFDVSGFPTI-FWKPKDS 178
+APWCGHCQKL P W++ E++ V +DATA++ +F + GFPTI F+ P S
Sbjct: 180 FAPWCGHCQKLEPEWKKAAEEM-GGRVKFGALDATAHESIAQKFGIRGFPTIKFFAPGTS 238
Query: 179 S-KKPQRYNGGRALEDFIKYVSEQ 247
S + Y GGR D I Y +
Sbjct: 239 SASDAEDYQGGRTSTDLISYAESK 262
Score = 55.2 bits (127), Expect = 5e-08
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLKDEEVDIIKIDATANDWPKSQFDVSGFPTIFWKPKDSS 181
YAP+CGHC+ L P +++ + LK +I IDAT + ++ + G+PTI
Sbjct: 50 YAPYCGHCKSLVPEYKKAAKLLKG-IAEIGAIDATVHQKIPLKYSIKGYPTIKIFGATEK 108
Query: 182 KKPQRYNGGR---ALEDFIKYVSEQATSE-LKGWDRKGNAKQGKE 304
KP YNG R + D +K E++ + LKG + + K K+
Sbjct: 109 SKPIDYNGPRTAKGIADAVKKSIEKSLEQRLKGKSSEKSKKSDKK 153
>U40411-4|AAC47065.1| 440|Caenorhabditis elegans Temporarily
assigned gene nameprotein 320 protein.
Length = 440
Score = 67.7 bits (158), Expect = 9e-12
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLKDEEVDIIKIDATANDWPKSQFDVSGFPTI-FWKPKDS 178
+APWCGHC+ L P W+ +LK +V + +DAT + ++F + GFPTI ++ P
Sbjct: 190 FAPWCGHCKSLEPQWKAAASELKG-KVRLGALDATVHTVVANKFAIRGFPTIKYFAPGSD 248
Query: 179 SKKPQRYNGGRALEDFIKYVSEQATSEL 262
Q Y+GGR D + + S +A +
Sbjct: 249 VSDAQDYDGGRQSSDIVAWASARAQENM 276
Score = 58.8 bits (136), Expect = 4e-09
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLKDEEVDIIKIDATANDWPKSQFDVSGFPTIFWKPKDSS 181
YAPWCGHC+ L P +++ LK + +D T + ++V GFPT+ D
Sbjct: 50 YAPWCGHCKSLVPEYKKAASALKG-VAKVGAVDMTQHQSVGGPYNVQGFPTLKIFGAD-K 107
Query: 182 KKPQRYNGGR---ALEDFIKYVSEQATSELKGWDRKGNAKQG 298
KKP YNG R A+ D + +++A S G G++ G
Sbjct: 108 KKPTDYNGQRTAQAIADSVLAEAKKAVSARLGGKSSGSSSSG 149
>AC006834-9|AAL11490.1| 447|Caenorhabditis elegans Hypothetical
protein ZK973.11 protein.
Length = 447
Score = 56.8 bits (131), Expect = 2e-08
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLKDEEVDII--KIDATANDWPKSQFDVSGFPTIFWKPKD 175
YAPWC HC++L PVW+++G L D + I K+D T ++ + G+PTI +
Sbjct: 51 YAPWCAHCKRLHPVWDQVGHTLSDSNLPIRVGKLDCTRFPAVANKLSIQGYPTILF---F 107
Query: 176 SSKKPQRYNGGRALEDFIKYVSEQA 250
+ Y GGR E + + A
Sbjct: 108 RNGHVIDYRGGREKEALVSFAKRCA 132
>AF250045-1|AAG17620.1| 246|Caenorhabditis elegans thioredoxin-like
protein DPY-11 protein.
Length = 246
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/82 (30%), Positives = 41/82 (50%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLKDEEVDIIKIDATANDWPKSQFDVSGFPTIFWKPKDSS 181
+APWC C+ L W + D + + ++D T N +F V+ PTI+ KD
Sbjct: 47 HAPWCPACKDLQKAWNAFADWSDDLGIKVGEVDVTVNPGLSGRFLVTALPTIY-HVKDGV 105
Query: 182 KKPQRYNGGRALEDFIKYVSEQ 247
+ +Y+G R DFI +V ++
Sbjct: 106 FR--QYSGARDKNDFISFVEDK 125
>AF125955-2|AAD14719.1| 246|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 11 protein.
Length = 246
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/82 (30%), Positives = 41/82 (50%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLKDEEVDIIKIDATANDWPKSQFDVSGFPTIFWKPKDSS 181
+APWC C+ L W + D + + ++D T N +F V+ PTI+ KD
Sbjct: 47 HAPWCPACKDLQKAWNAFADWSDDLGIKVGEVDVTVNPGLSGRFLVTALPTIY-HVKDGV 105
Query: 182 KKPQRYNGGRALEDFIKYVSEQ 247
+ +Y+G R DFI +V ++
Sbjct: 106 FR--QYSGARDKNDFISFVEDK 125
>AL032657-16|CAJ85780.1| 318|Caenorhabditis elegans Hypothetical
protein Y47H9C.5b protein.
Length = 318
Score = 45.2 bits (102), Expect = 6e-05
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLK--DEEVDIIKIDATANDWPKSQFDVSGFPTIFWKPKD 175
+APWCG CQ+LAP ++ ++ DE + ID + ++ +PT+ P
Sbjct: 107 FAPWCGPCQQLAPELQKAARQIAAFDENAHVASIDCQKYAQFCTNTQINSYPTVRMYPAK 166
Query: 176 SSKKPQR 196
+K+P+R
Sbjct: 167 KTKQPRR 173
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLKDEEVDIIKIDATANDWPK--SQFDVSGFPTI 157
+APWCGHC + AP+++++ ++L +V+ KID + WP V +PTI
Sbjct: 225 FAPWCGHCIQFAPIYDQIAKELAG-KVNFAKID--CDQWPGVCQGAQVRAYPTI 275
>AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical
protein Y47H9C.5a protein.
Length = 788
Score = 45.2 bits (102), Expect = 6e-05
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLK--DEEVDIIKIDATANDWPKSQFDVSGFPTIFWKPKD 175
+APWCG CQ+LAP ++ ++ DE + ID + ++ +PT+ P
Sbjct: 577 FAPWCGPCQQLAPELQKAARQIAAFDENAHVASIDCQKYAQFCTNTQINSYPTVRMYPAK 636
Query: 176 SSKKPQR 196
+K+P+R
Sbjct: 637 KTKQPRR 643
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLKDEEVDIIKIDATANDWPK--SQFDVSGFPTI 157
+APWCGHC + AP+++++ ++L +V+ KID + WP V +PTI
Sbjct: 695 FAPWCGHCIQFAPIYDQIAKELAG-KVNFAKID--CDQWPGVCQGAQVRAYPTI 745
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/87 (19%), Positives = 41/87 (47%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLKDEEVDIIKIDATANDWPKSQFDVSGFPTIFWKPKDSS 181
Y+ +C HC +LAP W + ++ + + + ++ + V+ +P++ + P
Sbjct: 142 YSTYCSHCHQLAPTWRKFAREI-EGTIRVGAVNCAEDPQLCQSQRVNAYPSLVFYPTG-- 198
Query: 182 KKPQRYNGGRALEDFIKYVSEQATSEL 262
+ Y G R +E + + ++ SE+
Sbjct: 199 ---EFYQGHRDVELMVDFAIQRLKSEV 222
>AF106589-2|AAC78230.1| 107|Caenorhabditis elegans Hypothetical
protein Y44E3A.3 protein.
Length = 107
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/63 (38%), Positives = 33/63 (52%)
Frame = +2
Query: 5 APWCGHCQKLAPVWEELGEKLKDEEVDIIKIDATANDWPKSQFDVSGFPTIFWKPKDSSK 184
A WCG CQ + P EEL + KD + I+KID D +++++ PT F D K
Sbjct: 29 ASWCGPCQMIKPRVEELAAEHKD-RLSILKIDVDECDGVGEEYEINSMPT-FLLIVDGIK 86
Query: 185 KPQ 193
K Q
Sbjct: 87 KDQ 89
>AC084197-8|AAG23476.1| 228|Caenorhabditis elegans Hypothetical
protein Y73B6BL.12 protein.
Length = 228
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLKDEEVDIIKIDATANDWPK--SQFDVSGFPTI 157
+APWCGHC + AP+++ + ++L +V+ KID + WP V +PTI
Sbjct: 135 FAPWCGHCIQFAPIYDRIAKELAG-KVNFAKID--CDQWPGVCQGAQVRAYPTI 185
>U23168-7|AAC38808.1| 115|Caenorhabditis elegans Hypothetical
protein B0228.5a protein.
Length = 115
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLKDEEVDIIKIDATANDWPKSQFDVSGFPT-IFWKPKDS 178
YA WCG C+ +AP+++EL K + K+D + S++DV PT IF K D+
Sbjct: 35 YATWCGPCKAIAPLYKELATTHKG--IIFCKVDVDEAEDLCSKYDVKMMPTFIFTKNGDA 92
Query: 179 SKKPQRYNGGRALEDFIKYVSEQ 247
+ + + +++VS Q
Sbjct: 93 IEALEGCVEDELRQKVLEHVSAQ 115
>U23168-6|AAP86623.1| 114|Caenorhabditis elegans Hypothetical
protein B0228.5b protein.
Length = 114
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLKDEEVDIIKIDATANDWPKSQFDVSGFPT-IFWKPKDS 178
YA WCG C+ +AP+++EL K + K+D + S++DV PT IF K D+
Sbjct: 34 YATWCGPCKAIAPLYKELATTHKG--IIFCKVDVDEAEDLCSKYDVKMMPTFIFTKNGDA 91
Query: 179 SKKPQRYNGGRALEDFIKYVSEQ 247
+ + + +++VS Q
Sbjct: 92 IEALEGCVEDELRQKVLEHVSAQ 114
>DQ241300-1|ABB45864.1| 114|Caenorhabditis elegans TRX-1b protein.
Length = 114
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLKDEEVDIIKIDATANDWPKSQFDVSGFPT-IFWKPKDS 178
YA WCG C+ +AP+++EL K + K+D + S++DV PT IF K D+
Sbjct: 34 YATWCGPCKAIAPLYKELATTHKG--IIFCKVDVDEAEDLCSKYDVKMMPTFIFTKNGDA 91
Query: 179 SKKPQRYNGGRALEDFIKYVSEQ 247
+ + + +++VS Q
Sbjct: 92 IEALEGCVEDELRQKVLEHVSAQ 114
>DQ241299-1|ABB45863.1| 115|Caenorhabditis elegans TRX-1a protein.
Length = 115
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLKDEEVDIIKIDATANDWPKSQFDVSGFPT-IFWKPKDS 178
YA WCG C+ +AP+++EL K + K+D + S++DV PT IF K D+
Sbjct: 35 YATWCGPCKAIAPLYKELATTHKG--IIFCKVDVDEAEDLCSKYDVKMMPTFIFTKNGDA 92
Query: 179 SKKPQRYNGGRALEDFIKYVSEQ 247
+ + + +++VS Q
Sbjct: 93 IEALEGCVEDELRQKVLEHVSAQ 115
>U80848-2|AAB37989.1| 574|Caenorhabditis elegans Hypothetical
protein T10H10.2 protein.
Length = 574
Score = 36.7 bits (81), Expect = 0.020
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLKDEEVDIIKIDA-----TANDWPKSQFDVSGFPTIFWK 166
Y+ WCGHC+ AP ++ L + + D +I+KI A N+ V FP I +
Sbjct: 63 YSDWCGHCRAFAPTYKNLAKDV-DGWQNIVKIAAINCADPVNEPVCRSNGVRFFPLIKYF 121
Query: 167 PKDS 178
P+DS
Sbjct: 122 PRDS 125
>AF143900-1|AAF66677.1| 284|Caenorhabditis elegans thioredoxin-like
protein protein.
Length = 284
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/85 (22%), Positives = 37/85 (43%)
Frame = +2
Query: 5 APWCGHCQKLAPVWEELGEKLKDEEVDIIKIDATANDWPKSQFDVSGFPTIFWKPKDSSK 184
A WCG C+ +AP +E L + +K+D + S+ V+ PT
Sbjct: 30 AVWCGPCKMIAPTFEALSNQYLG--AVFLKVDVEICEKTSSENGVNSMPTFMVFQSGVRV 87
Query: 185 KPQRYNGGRALEDFIKYVSEQATSE 259
+ + +ALE +K ++ + ++
Sbjct: 88 EQMKGADAKALETMVKKYADNSAAD 112
>AF143405-1|AAF66636.1| 284|Caenorhabditis elegans thioredoxin-like
protein TXL protein.
Length = 284
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/85 (22%), Positives = 37/85 (43%)
Frame = +2
Query: 5 APWCGHCQKLAPVWEELGEKLKDEEVDIIKIDATANDWPKSQFDVSGFPTIFWKPKDSSK 184
A WCG C+ +AP +E L + +K+D + S+ V+ PT
Sbjct: 30 AVWCGPCKMIAPTFEALSNQYLG--AVFLKVDVEICEKTSSENGVNSMPTFMVFQSGVRV 87
Query: 185 KPQRYNGGRALEDFIKYVSEQATSE 259
+ + +ALE +K ++ + ++
Sbjct: 88 EQMKGADAKALETMVKKYADNSAAD 112
>AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical
protein Y55F3AR.2 protein.
Length = 254
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 5 APWCGHCQKLAPVWEELGEKLKDEEVDIIKIDATANDWPKSQFDVSGFPT 154
A WCG CQ +AP++ +L + K +K+D + + V+ PT
Sbjct: 30 ASWCGPCQYIAPIFSDLANQYKGSV--FLKVDVDECRGTAATYGVNAMPT 77
>AC024810-17|AAF60759.1| 284|Caenorhabditis elegans Hypothetical
protein Y54E10A.3 protein.
Length = 284
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/85 (22%), Positives = 37/85 (43%)
Frame = +2
Query: 5 APWCGHCQKLAPVWEELGEKLKDEEVDIIKIDATANDWPKSQFDVSGFPTIFWKPKDSSK 184
A WCG C+ +AP +E L + +K+D + S+ V+ PT
Sbjct: 30 AVWCGPCKMIAPTFEALSNQYLG--AVFLKVDVEICEKTSSENGVNSMPTFMVFQSGVRV 87
Query: 185 KPQRYNGGRALEDFIKYVSEQATSE 259
+ + +ALE +K ++ + ++
Sbjct: 88 EQMKGADAKALETMVKKYADNSAAD 112
>Z69637-1|CAA93467.1| 601|Caenorhabditis elegans Hypothetical
protein F35G2.1a protein.
Length = 601
Score = 33.9 bits (74), Expect = 0.14
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLKD 73
YA WCGHC+ AP + + ++D
Sbjct: 76 YADWCGHCRAFAPYFRQFANMVRD 99
>Z77657-7|CAH60768.1| 320|Caenorhabditis elegans Hypothetical
protein F08H9.12 protein.
Length = 320
Score = 31.1 bits (67), Expect = 1.0
Identities = 29/122 (23%), Positives = 47/122 (38%), Gaps = 2/122 (1%)
Frame = -2
Query: 742 LIYHPQVEVYQYTTYDNTSD-FYKNVYYFLTKRSKML-SYICAPYTESNER*NCVYASVL 569
LIY P + V + ++ ++ Y + Y F M + PY SN NC S+L
Sbjct: 199 LIYIPVMIVTRKNSHQHSQQHIYLHEYVFFQSCLVMFFKLVTLPYFLSNLEYNCASTSML 258
Query: 568 FCKSSKVILDLLSVNMMVNECNITIARGTTMSLYPKNAFHICFPLDRYNTHKLRSHISLF 389
+ V+ L + + +CNI S + F + F + H S I+
Sbjct: 259 SMSLADVVTTPLIIQLSYLKCNIHDVICLFFSFDIQKYFRVVFGNVENSVHPNLSRIAFS 318
Query: 388 FT 383
T
Sbjct: 319 IT 320
>Z71178-7|CAA94881.1| 119|Caenorhabditis elegans Hypothetical
protein B0024.9 protein.
Length = 119
Score = 31.1 bits (67), Expect = 1.0
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLKDEEVDIIKIDATANDWPKSQFDVSGFPTIFWKPKDSS 181
+A WCG CQ L P EE + V + KI+ + +S PT+F +
Sbjct: 38 HAEWCGPCQALGPRLEEKVNG-RQGSVLLAKINVDHAGELAMDYGISAVPTVF--AFKNG 94
Query: 182 KKPQRYNG---GRALEDFIKYV 238
+K ++G L+DFI+ V
Sbjct: 95 EKISGFSGVLDDEQLDDFIEDV 116
>Z81552-7|CAB04487.2| 606|Caenorhabditis elegans Hypothetical
protein F56G4.5 protein.
Length = 606
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLKDEEVDIIKIDATANDWPKSQFDVSGFPT-IFWK 166
+A WCG C+ ++P++E+ + + +K++ ++++S PT IF K
Sbjct: 30 FANWCGPCRMISPIFEQFSAEYGN--ATFLKVNCDVARDIVQRYNISAMPTFIFLK 83
>AL117201-5|CAB57916.1| 606|Caenorhabditis elegans Hypothetical
protein F56G4.5 protein.
Length = 606
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLKDEEVDIIKIDATANDWPKSQFDVSGFPT-IFWK 166
+A WCG C+ ++P++E+ + + +K++ ++++S PT IF K
Sbjct: 30 FANWCGPCRMISPIFEQFSAEYGN--ATFLKVNCDVARDIVQRYNISAMPTFIFLK 83
>AF068720-8|AAM15583.1| 142|Caenorhabditis elegans Hypothetical
protein K02H11.6 protein.
Length = 142
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 5 APWCGHCQKLAPVWEELGEKLKDE-EVDIIKIDATAND 115
A WCG C+ PV ++ E+++D+ E+ D + +D
Sbjct: 34 AHWCGPCRNFTPVLKDFYEEVQDDFEIVFASSDQSESD 71
>U23511-9|AAC46796.1| 140|Caenorhabditis elegans Hypothetical
protein C32D5.8a protein.
Length = 140
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 5 APWCGHCQKLAPVWEELGEKLKDE-EVDIIKIDATAND 115
A WC C+ P+ ++ E+++DE EV + D + +D
Sbjct: 34 AHWCPPCRGFTPILKDFYEEVEDEFEVVFVSFDRSESD 71
>U23511-8|AAU20849.1| 167|Caenorhabditis elegans Hypothetical
protein C32D5.8b protein.
Length = 167
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 5 APWCGHCQKLAPVWEELGEKLKDE-EVDIIKIDATAND 115
A WC C+ P+ ++ E+++DE EV + D + +D
Sbjct: 61 AHWCPPCRGFTPILKDFYEEVEDEFEVVFVSFDRSESD 98
>U70853-9|AAB09142.2| 158|Caenorhabditis elegans Hypothetical
protein M01H9.1 protein.
Length = 158
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +2
Query: 5 APWCGHCQKLAPVWEELGEKLKDEEVDIIKIDATANDWPKSQFD 136
A WCG C++ P+ +EL +++ I++ + D+ + Q D
Sbjct: 36 ASWCGPCRQFTPIMKELYQQIAATN-QPIEVILLSRDYMRFQLD 78
>U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated
protein 68 protein.
Length = 5079
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 50 ELGEKLKDEEVDIIKIDAT-ANDWPKSQFDVSGFPTIFWKPKDSSK 184
EL LK+EE+D + + + P S+ G+P I W P + +
Sbjct: 2263 ELALALKEEELDKVAVYLSRCGLQPNSELITKGYPDIGWDPVEGER 2308
>D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine receptor
protein.
Length = 5071
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 50 ELGEKLKDEEVDIIKIDAT-ANDWPKSQFDVSGFPTIFWKPKDSSK 184
EL LK+EE+D + + + P S+ G+P I W P + +
Sbjct: 2384 ELALALKEEELDKVAVYLSRCGLQPNSELITKGYPDIGWDPVEGER 2429
>U88314-9|AAF99881.1| 408|Caenorhabditis elegans Hypothetical
protein C46H11.2 protein.
Length = 408
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -3
Query: 408 EVIFHCFSHYIHPSHKYTRRSFMESFESQQHAYNSS 301
+++F C HY P++ Y +F SF H Y S
Sbjct: 131 DIVFVCNGHYFAPNNPYEESAFEGSF-IHSHDYRHS 165
>AF040655-12|AAB95039.1| 507|Caenorhabditis elegans Hypothetical
protein T24E12.1 protein.
Length = 507
Score = 27.9 bits (59), Expect = 9.3
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +2
Query: 2 YAPWCGHCQKLAPVWEELGEKLKDEE 79
Y PW +K +W E+G+K++ E+
Sbjct: 200 YEPWLRLSKKKKEIWAEMGKKVRAEQ 225
>AF039053-5|AAC25875.2| 293|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 23 protein.
Length = 293
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = -1
Query: 503 HYYCKRNDNVSVPKECFSYLLSLGQI*HT*TQKSYFIVFHITFILHTNTHADLSWKVLNH 324
+Y+C N ++ P+ C + S+ KS ++F +TF + L WKV
Sbjct: 146 YYFC--NFELTFPRNCLTIGCSINACSSRFWTKSKLVIFVLTFSFAALLSSKLLWKVFKK 203
Query: 323 NS 318
++
Sbjct: 204 DN 205
>AF016420-1|AAB65307.2| 310|Caenorhabditis elegans Serpentine
receptor, class sx protein11 protein.
Length = 310
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -1
Query: 410 QKSYFIVFHITFILHTNTHADLSWKVLN 327
Q S IVFH FILH ++ D S LN
Sbjct: 280 QTSSAIVFHTNFILHKSSTMDFSASRLN 307
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,341,423
Number of Sequences: 27780
Number of extensions: 431682
Number of successful extensions: 1523
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1497
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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